Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.8e-127 458.8 255 100.0
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 4.0e-126 454.9 255 99.6
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 7.6e-125 450.7 255 99.2
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 8.2e-119 430.6 246 98.0
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 3.4e-117 425.2 246 96.7
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.0e-104 382.9 249 91.6
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 5.2e-97 358.2 246 84.1
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 5.9e-93 344.7 252 79.4
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 1.4e-89 333.6 251 76.9
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 1.1e-83 313.9 255 72.9
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 1.5e-83 313.5 250 72.0
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 1.2e-82 310.5 254 74.4
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 1.0e-81 307.4 248 71.8
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 1.4e-81 307.0 256 72.3
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 5.2e-81 305.1 256 71.5
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 8.8e-81 304.3 249 70.7
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 1.2e-80 303.9 253 71.1
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 2.0e-80 303.1 250 69.2
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 4.4e-80 302.0 250 70.8
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 4.4e-80 302.0 251 70.5
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.3e-79 300.4 261 63.6
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 1.7e-79 300.1 250 68.4
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 2.8e-79 299.3 244 74.2
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.7e-79 298.9 262 66.8
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 4.8e-79 298.5 250 71.2
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 9.1e-78 294.3 260 64.6
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 1.6e-77 293.5 251 67.7
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 2.0e-77 293.1 249 69.1
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 5.9e-77 291.6 250 69.2
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 7.7e-77 291.2 251 64.1
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 1.0e-76 290.8 254 68.9
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 2.9e-76 289.3 249 68.3
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 2.9e-76 289.3 259 68.3
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 2.9e-76 289.3 249 68.7
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 2.9e-76 289.3 269 63.9
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 3.8e-76 288.9 256 62.5
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 3.8e-76 288.9 254 64.2
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 1.5e-75 287.0 260 59.6
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 1.9e-75 286.6 249 67.9
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 2.5e-75 286.2 250 68.0
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 2.5e-75 286.2 250 68.0
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 2.5e-75 286.2 254 68.1
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 2.5e-75 286.2 251 60.6
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 4.2e-75 285.4 250 68.0
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 7.2e-75 284.6 256 62.1
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 7.2e-75 284.6 261 67.8
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 7.2e-75 284.6 249 67.5
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 9.5e-75 284.3 243 65.0
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 1.2e-74 283.9 250 67.6
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 1.2e-74 283.9 254 65.0
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 2.1e-74 283.1 249 67.9
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 2.8e-74 282.7 254 67.7
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 3.6e-74 282.3 244 64.8
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 6.1e-74 281.6 255 65.1
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 6.1e-74 281.6 248 67.3
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 4.0e-73 278.9 254 68.5
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 6.8e-73 278.1 258 64.0
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 1.5e-72 276.9 244 63.5
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 2.0e-72 276.6 249 66.7
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 4.4e-72 275.4 254 63.8
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 4.4e-72 275.4 249 66.3
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 5.7e-72 275.0 279 59.9
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 1.3e-71 273.9 243 70.0
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 1.8e-70 270.0 251 62.2
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.6e-69 266.9 261 62.8
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 1.6e-69 266.9 153 92.8
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 1.1e-67 260.8 257 57.6
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 1.5e-67 260.4 256 64.1
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 1.9e-67 260.0 247 63.6
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 1.0e-65 254.2 252 62.7
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 2.3e-65 253.1 268 56.7
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 6.8e-65 251.5 223 62.3
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 1.5e-64 250.4 246 61.8
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 2.6e-64 249.6 261 60.2
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 9.8e-64 247.7 251 57.0
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 9.8e-64 247.7 251 66.5
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 2.9e-63 246.1 249 58.2
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 1.4e-62 243.8 221 64.3
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 7.0e-62 241.5 246 58.9
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 6.0e-61 238.4 246 60.2
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 3.9e-60 235.7 245 62.0
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 3.3e-59 232.6 195 66.7
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 1.1e-57 227.6 248 56.5
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 1.4e-57 227.3 188 65.4
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 2.0e-56 223.4 221 64.7
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 2.6e-56 223.0 232 61.2
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 2.6e-56 223.0 249 57.0
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 3.4e-56 222.6 252 56.3
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 5.8e-56 221.9 193 61.1
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 1.3e-55 220.7 243 56.8
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 3.7e-55 219.2 252 56.7
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 4.9e-55 218.8 251 55.0
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 8.3e-55 218.0 251 50.6
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 1.4e-54 217.2 241 56.4
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 2.4e-54 216.5 258 50.8
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 2.1e-53 213.4 180 62.8
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 3.5e-53 212.6 205 62.4
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 8.6e-52 208.0 246 55.7
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 1.2e-45 187.6 257 44.7
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.3e-44 184.1 154 69.5
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 1.2e-42 177.6 253 43.5
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 2.6e-40 169.9 250 48.8
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.2e-38 162.5 152 58.6
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.7e-37 159.8 163 63.8
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 7.8e-37 158.3 259 39.8
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 2.5e-35 153.3 142 58.5
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 4.4e-32 142.5 271 41.3
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 3.9e-28 129.4 255 37.6
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.5e-27 126.7 95 71.6
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.5e-27 126.7 95 71.6
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 9.6e-27 124.8 222 41.4
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 9.9e-24 114.8 236 38.6
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 1.3e-20 104.4 160 43.1
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 2.1e-18 97.1 185 38.9
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 4.8e-18 95.9 133 45.9
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 1.0e-15 88.2 340 27.6
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 3.9e-12 76.3 45 75.6
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 5.8e-08 62.4 107 43.0
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 1.0e-07 61.6 57 56.1
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 6.5e-07 58.9 92 43.5
Oeu006328.1 Olea europaea HOM05D006753 ORTHO05D008521 1.9e-06 57.4 86 40.7


User provided reference genes

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