Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G5310 Fragaria x ananassa HOM05D005891 ORTHO05D007214 0.0e+00 1360.1 697 100.0
FvH4_6g24900 Fragaria vesca HOM05D005891 ORTHO05D007214 0.0e+00 1352.8 697 99.1
FAN05G1661 Fragaria x ananassa HOM05D005891 ORTHO05D007214 0.0e+00 1326.6 697 97.6
RcHm_v2.0_Chr2g0124601 Rosa chinensis HOM05D005891 ORTHO05D007214 0.0e+00 1232.6 697 90.4
Prupe.4G274500 Prunus persica HOM05D005891 ORTHO05D007214 1.9e-306 1055.4 697 76.5
MD14G1081800 Malus domestica HOM05D005891 ORTHO05D007214 1.2e-300 1036.2 700 74.9
MD12G1089200 Malus domestica HOM05D005891 ORTHO05D007214 1.3e-299 1032.7 699 75.1
FAN02G2450 Fragaria x ananassa HOM05D005891 ORTHO05D007214 2.2e-267 925.6 490 96.7
Haze_19761 Corylus avellana HOM05D005891 ORTHO05D007214 1.9e-234 816.2 725 59.6
CANSAT80G2643 Cannabis sativa HOM05D005891 ORTHO05D007214 2.6e-231 805.8 710 60.1
QL07p004892 Quercus lobata HOM05D005891 ORTHO05D007214 1.3e-230 803.5 754 57.4
Atru.chr11.2650 Acer truncatum HOM05D005891 ORTHO05D007214 8.2e-230 800.8 747 56.8
Thecc.04G215900 Theobroma cacao HOM05D005891 ORTHO05D007214 3.1e-229 798.9 719 59.2
CiPaw.09G043200 Carya illinoinensis HOM05D005891 ORTHO05D007214 1.0e-227 793.9 721 58.0
Gorai.006G219000 Gossypium raimondii HOM05D005891 ORTHO05D007214 1.0e-227 793.9 716 58.1
Manes.09G010000 Manihot esculenta HOM05D005891 ORTHO05D007214 2.1e-225 786.2 721 55.8
COL.COLO4_20863 Corchorus olitorius HOM05D005891 ORTHO05D007214 6.1e-225 784.6 715 58.7
Potri.006G044500 Populus trichocarpa HOM05D005891 ORTHO05D007214 6.1e-225 784.6 727 57.4
Gohir.A09G201700 Gossypium hirsutum HOM05D005891 ORTHO05D007214 6.7e-224 781.2 716 57.1
TAR633G2073 Trochodendron aralioides HOM05D005891 ORTHO05D007214 2.0e-223 779.6 719 57.9
Duzib212G0478 Durio zibethinus HOM05D005891 ORTHO05D007214 5.7e-223 778.1 718 57.2
Dinv14832 Davidia involucrata HOM05D005891 ORTHO05D007214 4.2e-218 761.9 662 60.4
CANSAT80G2523 Cannabis sativa HOM05D005891 ORTHO05D007214 2.3e-216 756.1 710 57.3
Actinidia39186 Actinidia chinensis HOM05D005891 ORTHO05D007214 2.2e-214 749.6 725 54.1
Lj1g0021626 Lotus japonicus HOM05D005891 ORTHO05D007214 1.2e-212 743.8 723 54.4
Sabra06G0030700 Salix brachista HOM05D005891 ORTHO05D007214 1.7e-211 740.0 695 56.4
TWI53G1500 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 1.7e-211 740.0 724 54.4
Lalb_Chr20g0110281 Lupinus albus HOM05D005891 ORTHO05D007214 1.0e-208 730.7 718 54.0
Glyma.18G212600 Glycine max HOM05D005891 ORTHO05D007214 2.0e-207 726.5 722 54.0
Hma1.2p1_0275F.1_g110840 Hydrangea macrophylla HOM05D005891 ORTHO05D007214 2.6e-207 726.1 644 58.7
Rhsim03G0031400 Rhododendron simsii HOM05D005891 ORTHO05D007214 3.4e-207 725.7 720 54.0
Glyma.03G131800 Glycine max HOM05D005891 ORTHO05D007214 1.1e-205 720.7 722 53.7
Medtr7g090600 Medicago truncatula HOM05D005891 ORTHO05D007214 1.4e-205 720.3 723 53.3
Ca_08420_v3 Cicer arietinum L. HOM05D005891 ORTHO05D007214 5.4e-205 718.4 721 53.7
TPR.G32752 Trifolium pratense HOM05D005891 ORTHO05D007214 5.9e-204 714.9 725 52.6
ClCG04G004100 Citrullus lanatus HOM05D005891 ORTHO05D007214 4.3e-202 708.8 725 53.0
Phvul.001G127800 Phaseolus vulgaris HOM05D005891 ORTHO05D007214 1.6e-201 706.8 723 53.3
Duzib151G0628 Durio zibethinus HOM05D005891 ORTHO05D007214 6.8e-200 701.4 713 54.1
Aqoxy7G02967 Aquilegia oxysepala HOM05D005891 ORTHO05D007214 3.7e-198 695.7 727 52.3
CsaV3_4G022060 Cucumis sativus L. HOM05D005891 ORTHO05D007214 3.7e-198 695.7 731 51.3
Sed0000553 Sechium edule HOM05D005891 ORTHO05D007214 5.9e-196 688.3 713 51.2
Cfa016743 Carpinus fangiana HOM05D005891 ORTHO05D007214 7.8e-196 688.0 535 66.4
AL5G38660 Arabidopsis lyrata HOM05D005891 ORTHO05D007214 1.1e-194 684.1 706 51.8
A09p50110 Brassica napus HOM05D005891 ORTHO05D007214 1.9e-194 683.3 705 52.1
BraA09t40462Z Brassica rapa HOM05D005891 ORTHO05D007214 1.9e-194 683.3 705 52.1
GSVIVG01033562001 Vitis vinifera HOM05D005891 ORTHO05D007214 1.0e-192 677.6 703 53.8
Ciclev10025261m.g Citrus clementina HOM05D005891 ORTHO05D007214 6.8e-192 674.9 531 65.3
Ciclev10031083m.g Citrus clementina HOM05D005891 ORTHO05D007214 2.0e-191 673.3 537 64.6
Nitab4.5_0008674g0030 Nicotiana tabacum HOM05D005891 ORTHO05D007214 1.3e-190 670.6 724 50.4
BolC8t50864H Brassica oleracea HOM05D005891 ORTHO05D007214 1.1e-189 667.5 707 51.3
Nitab4.5_0001618g0090 Nicotiana tabacum HOM05D005891 ORTHO05D007214 1.1e-189 667.5 728 50.1
C08p32480 Brassica napus HOM05D005891 ORTHO05D007214 2.0e-188 663.3 706 51.1
Solyc04g017700.4 Solanum lycopersicum HOM05D005891 ORTHO05D007214 6.0e-188 661.8 724 50.3
PGR031G3404 Punica granatum HOM05D005891 ORTHO05D007214 7.8e-188 661.4 725 50.8
Nn7g36464 Nelumbo nucifera HOM05D005891 ORTHO05D007214 2.3e-187 659.8 727 50.1
BcaC07g40068 Brassica carinata HOM05D005891 ORTHO05D007214 8.6e-187 657.9 696 51.3
THA.LOC104824423 Tarenaya hassleriana HOM05D005891 ORTHO05D007214 1.1e-186 657.5 714 49.7
Cc06_g18470 Coffea canephora HOM05D005891 ORTHO05D007214 2.8e-185 652.9 733 48.8
Sc19g0008430 Simmondsia chinensis HOM05D005891 ORTHO05D007214 1.4e-184 650.6 718 49.2
Nn2g15043 Nelumbo nucifera HOM05D005891 ORTHO05D007214 1.8e-184 650.2 724 49.0
MELO3C014212.2 Cucumis melo HOM05D005891 ORTHO05D007214 9.8e-183 644.4 658 53.5
Lsat_1_v5_gn_3_23040 Lactuca sativa HOM05D005891 ORTHO05D007214 7.1e-181 638.3 710 48.6
Oeu015292.1 Olea europaea HOM05D005891 ORTHO05D007214 7.1e-181 638.3 637 53.1
PSO063G0854 Papaver somniferum HOM05D005891 ORTHO05D007214 3.5e-180 636.0 723 48.1
Gohir.D09G195600 Gossypium hirsutum HOM05D005891 ORTHO05D007214 2.3e-179 633.3 545 60.7
HanXRQChr17g0536551 Helianthus annuus HOM05D005891 ORTHO05D007214 6.6e-179 631.7 733 48.4
BcaC07g40040 Brassica carinata HOM05D005891 ORTHO05D007214 2.1e-177 626.7 670 51.2
PSO170G1429 Papaver somniferum HOM05D005891 ORTHO05D007214 6.2e-177 625.2 723 47.4
PGSC0003DMG402007625 Solanum tuberosum HOM05D005891 ORTHO05D007214 2.0e-175 620.2 648 51.5
Aa31LG10G12080 Aethionema arabicum HOM05D005891 ORTHO05D007214 4.4e-175 619.0 677 50.8
CAN.G1237.25 Capsicum annuum HOM05D005891 ORTHO05D007214 5.8e-175 618.6 682 49.4
MBI16_g31793_MAGBIO Magnolia biondii HOM05D005891 ORTHO05D007214 8.4e-174 614.8 681 51.1
Sopen04g008780 Solanum pennellii HOM05D005891 ORTHO05D007214 3.2e-173 612.8 649 51.5
ATR0580G208 Amborella trichopoda HOM05D005891 ORTHO05D007214 7.8e-172 608.2 721 47.0
EL10Ac3g07174 Beta vulgaris HOM05D005891 ORTHO05D007214 3.9e-171 605.9 719 46.2
Hund19119 Selenicereus undatus HOM05D005891 ORTHO05D007214 5.1e-171 605.5 769 44.6
Migut.K00113 Erythranthe guttata HOM05D005891 ORTHO05D007214 6.6e-171 605.1 724 49.0
Psat3g075960 Pisum sativum HOM05D005891 ORTHO05D007214 7.3e-170 601.7 536 59.3
arahy.Tifrunner.gnm1.ann1.324ZN3 Arachis hypogaea HOM05D005891 ORTHO05D007214 4.0e-168 595.9 782 45.0
Ah.13g076700 Amaranthus hybridus HOM05D005891 ORTHO05D007214 1.2e-167 594.3 728 47.3
arahy.Tifrunner.gnm1.ann1.68N1MV Arachis hypogaea HOM05D005891 ORTHO05D007214 2.2e-166 590.1 776 44.8
MD07G1151600 Malus domestica HOM05D005891 ORTHO05D007214 5.4e-165 585.5 493 64.3
DCAR_002883 Daucus carota HOM05D005891 ORTHO05D007214 1.2e-164 584.3 642 50.8
CARHR119890 Cardamine hirsuta HOM05D005891 ORTHO05D007214 1.3e-163 580.9 525 56.2
Peaxi162Scf00130g01129 Petunia axillaris HOM05D005891 ORTHO05D007214 2.3e-163 580.1 721 45.8
Thhalv10005871m.g Eutrema salsugineum HOM05D005891 ORTHO05D007214 5.1e-163 578.9 530 56.2
Sp5g05400 Schrenkiella parvula HOM05D005891 ORTHO05D007214 4.3e-162 575.9 529 56.3
Carub.0005s2399 Capsella rubella HOM05D005891 ORTHO05D007214 4.5e-159 565.8 525 55.8
AUR62026144 Chenopodium quinoa HOM05D005891 ORTHO05D007214 4.2e-157 559.3 694 46.7
ECA246G3700 Erigeron canadensis HOM05D005891 ORTHO05D007214 5.4e-157 558.9 594 50.3
SalBow4G2335 Salvia bowleyana HOM05D005891 ORTHO05D007214 3.5e-156 556.2 726 44.8
AUR62030390 Chenopodium quinoa HOM05D005891 ORTHO05D007214 1.8e-155 553.9 690 47.0
SalBow1G2481 Salvia bowleyana HOM05D005891 ORTHO05D007214 3.0e-155 553.1 737 45.3
AT3G57170 Arabidopsis thaliana HOM05D005891 ORTHO05D007214 3.9e-155 552.7 527 55.2
Eucgr.A02290 Eucalyptus grandis HOM05D005891 ORTHO05D007214 5.3e-152 542.3 537 54.6
Zm00001eb364590 Zea mays HOM05D005891 ORTHO05D007214 1.8e-144 517.3 749 39.3
CDE08G1332 Ceratophyllum demersum HOM05D005891 ORTHO05D007214 6.9e-144 515.4 672 43.5
HPP92_010949 Vanilla planifolia HOM05D005891 ORTHO05D007214 4.3e-138 496.1 711 41.5
SGA_v2.0_scaffold94G28504 Striga asiatica HOM05D005891 ORTHO05D007214 1.4e-128 464.5 719 40.5
VMungo1383G0485 Vigna mungo HOM05D005891 ORTHO05D007214 2.2e-126 457.2 369 63.4
SEGI_09087 Sequoiadendron giganteum HOM05D005891 ORTHO05D007214 1.6e-124 451.1 607 41.8
Lj5A499T12 Lonicera japonica HOM05D005891 ORTHO05D007214 3.3e-122 443.4 433 54.5
Actinidia09292 Actinidia chinensis HOM05D005891 ORTHO05D007214 7.7e-119 432.2 733 36.4
vmacro21952 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 7.2e-117 425.6 455 51.2
FAN05G3805 Fragaria x ananassa HOM05D005891 ORTHO05D007214 9.1e-104 382.1 198 97.0
Prupe.5G000500 Prunus persica HOM05D005891 ORTHO05D007214 3.0e-99 367.1 229 86.0
vmacro20338 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 2.9e-94 350.5 645 36.9
unitig_748.g7229 Utricularia gibba HOM05D005891 ORTHO05D007214 2.5e-93 347.4 700 34.6
Pp3c24_1230 Physcomitrium patens HOM05D005891 ORTHO05D007214 9.5e-93 345.5 726 33.3
AagrBONN_evm.TU.Sc2ySwM_117.2192 Anthoceros agrestis HOM05D005891 ORTHO05D007214 8.0e-84 315.8 733 31.9
Mapoly0019s0088 Marchantia polymorpha HOM05D005891 ORTHO05D007214 4.3e-77 293.5 614 33.4
SMO367G0314 Selaginella moellendorffii HOM05D005891 ORTHO05D007214 9.2e-64 249.2 505 32.1
Ciclev10013765m.g Citrus clementina HOM05D005891 ORTHO05D007214 3.5e-63 247.3 237 59.9
MD07G1151500 Malus domestica HOM05D005891 ORTHO05D007214 3.6e-60 237.3 226 56.6
Cpa.g.sc66.74 Carica papaya HOM05D005891 ORTHO05D007214 6.0e-55 219.9 148 75.7
FAN02G2483 Fragaria x ananassa HOM05D005891 ORTHO05D007214 9.9e-50 202.6 102 96.1
Os05g0290300 Oryza sativa ssp. japonica HOM05D005891 ORTHO05D007214 8.4e-49 199.5 204 46.6
CBR_g4216 Chara braunii HOM05D000019 ORTHO05D000048 3.9e-46 190.7 259 42.1
VMungo1383G2003 Vigna mungo HOM05D005891 ORTHO05D007214 1.4e-43 182.2 279 41.9
QL07p005099 Quercus lobata HOM05D005891 ORTHO05D007214 1.3e-41 175.6 142 66.2
Lj5C499G2 Lonicera japonica HOM05D005891 ORTHO05D007214 1.2e-34 152.5 212 45.8
TWI74G1459 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 1.3e-28 132.5 147 46.9
Cfa022822 Carpinus fangiana HOM05D005891 ORTHO05D007214 7.6e-26 123.2 409 28.1
Glyma.19G133702 Glycine max HOM05D005891 ORTHO05D007214 1.0e-22 112.8 198 34.8
CSS0027694 Camellia sinensis var. sinensis HOM05D005891 ORTHO05D007214 1.6e-20 105.5 117 43.6
C04p35350 Brassica napus HOM05D005891 ORTHO05D032421 3.1e-19 101.3 229 34.1
BolC4t25089H Brassica oleracea HOM05D005891 ORTHO05D032421 3.1e-19 101.3 229 34.1
Actinidia39189 Actinidia chinensis HOM05D005891 ORTHO05D007214 2.6e-18 98.2 121 40.5
BcaC02g09903 Brassica carinata HOM05D005891 ORTHO05D032421 9.7e-13 79.7 73 56.2
Actinidia39187 Actinidia chinensis HOM05D005891 ORTHO05D007214 9.1e-11 73.2 67 52.2
Cpa.g.sc66.72 Carica papaya HOM05D005891 ORTHO05D007214 3.4e-10 71.2 84 42.9


User provided reference genes

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