Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G5171 Fragaria x ananassa HOM05D003121 ORTHO05D003535 4.6e-95 351.3 186 100.0
FvH4_6g40673 Fragaria vesca HOM05D003121 ORTHO05D003535 7.4e-85 317.4 164 99.4
FvH4_3g23920 Fragaria vesca HOM05D003121 ORTHO05D003535 7.0e-35 151.4 133 65.4
FAN11G2297 Fragaria x ananassa HOM05D003121 ORTHO05D003535 7.0e-35 151.4 133 65.4
FvH4_2g26761 Fragaria vesca HOM05D003121 ORTHO05D003535 8.5e-33 144.4 113 67.3
FAN14G2238 Fragaria x ananassa HOM05D003121 ORTHO05D003535 2.0e-29 133.3 102 71.6
FvH4_6g40672 Fragaria vesca HOM05D003121 ORTHO05D003535 4.4e-29 132.1 87 78.2
FAN05G2449 Fragaria x ananassa HOM05D003121 ORTHO05D210508 4.3e-16 89.0 57 78.9
FAN02G1177 Fragaria x ananassa HOM05D003121 ORTHO05D003535 8.0e-15 84.7 76 55.3
FAN05G0168 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.0e-14 84.3 76 60.5
FvH4_3g06550 Fragaria vesca HOM05D003121 ORTHO05D003535 1.4e-14 84.0 76 60.5
FAN09G3405 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.4e-14 84.0 76 60.5
FAN11G3129 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.4e-14 84.0 79 58.2
FvH4_6g03220 Fragaria vesca HOM05D003121 ORTHO05D003535 1.8e-14 83.6 76 53.9
FvH4_6g03710 Fragaria vesca HOM05D003121 ORTHO05D003535 1.8e-14 83.6 76 59.2
FAN07G2467 Fragaria x ananassa HOM05D003121 ORTHO05D003535 3.1e-14 82.8 72 63.9
Lj5P177T42 Lonicera japonica HOM05D003121 ORTHO05D003535 5.2e-14 82.0 88 52.3
FvH4_6g03780 Fragaria vesca HOM05D003121 ORTHO05D003535 8.9e-14 81.3 68 64.7
FAN14G4574 Fragaria x ananassa HOM05D003121 ORTHO05D003535 8.9e-14 81.3 68 64.7
FAN21G0422 Fragaria x ananassa HOM05D003121 ORTHO05D003535 8.9e-14 81.3 76 55.3
FAN25G3084 Fragaria x ananassa HOM05D001096 ORTHO05D006157 8.9e-14 81.3 141 41.8
Eucgr.G01791 Eucalyptus grandis HOM05D003121 ORTHO05D003535 1.2e-13 80.9 88 52.3
FAN05G5388 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.2e-13 80.9 68 64.7
PGR042G3155 Punica granatum HOM05D003121 ORTHO05D003535 1.2e-13 80.9 70 60.0
TAR625G0403 Trochodendron aralioides HOM05D003121 ORTHO05D003535 1.2e-13 80.9 72 58.3
TAR376G0768 Trochodendron aralioides HOM05D003121 ORTHO05D003535 2.0e-13 80.1 72 55.6
DCAR_022799 Daucus carota HOM05D003121 ORTHO05D003535 3.4e-13 79.3 88 52.3
GSVIVG01037045001 Vitis vinifera HOM05D003121 ORTHO05D003535 3.4e-13 79.3 77 54.5
FAN09G3057 Fragaria x ananassa HOM05D003121 ORTHO05D003535 4.4e-13 79.0 68 63.2
Prupe.8G168900 Prunus persica HOM05D003121 ORTHO05D003535 4.4e-13 79.0 70 57.1
PSO541G2003 Papaver somniferum HOM05D003121 ORTHO05D003535 5.8e-13 78.6 83 53.0
PSO675G0341 Papaver somniferum HOM05D003121 ORTHO05D003535 5.8e-13 78.6 83 53.0
Nn5g27768 Nelumbo nucifera HOM05D003121 ORTHO05D003535 7.5e-13 78.2 87 49.4
AUR62010012 Chenopodium quinoa HOM05D003121 ORTHO05D003535 1.7e-12 77.0 70 55.7
AUR62013002 Chenopodium quinoa HOM05D003121 ORTHO05D003535 1.7e-12 77.0 70 55.7
AUR62015153 Chenopodium quinoa HOM05D003121 ORTHO05D003535 1.7e-12 77.0 70 55.7
ClCG02G003910 Citrullus lanatus HOM05D003121 ORTHO05D003535 1.7e-12 77.0 70 57.1
MELO3C013333.2 Cucumis melo HOM05D003121 ORTHO05D003535 1.7e-12 77.0 70 57.1
CsaV3_7G001220 Cucumis sativus L. HOM05D003121 ORTHO05D003535 1.7e-12 77.0 70 57.1
Sed0021457 Sechium edule HOM05D003121 ORTHO05D003535 1.7e-12 77.0 70 58.6
Sc14g0002330 Simmondsia chinensis HOM05D003121 ORTHO05D003535 1.7e-12 77.0 70 57.1
EL10Ac6g13967 Beta vulgaris HOM05D003121 ORTHO05D003535 2.9e-12 76.3 70 55.7
BraA06t26383Z Brassica rapa HOM05D003121 ORTHO05D003535 2.9e-12 76.3 77 51.9
C07p43950 Brassica napus HOM05D003121 ORTHO05D003535 3.7e-12 75.9 77 51.9
CDE02G2638 Ceratophyllum demersum HOM05D003121 ORTHO05D003535 3.7e-12 75.9 83 53.0
Glyma.10G283300 Glycine max HOM05D003121 ORTHO05D003535 3.7e-12 75.9 70 55.7
CANSAT78G0282 Cannabis sativa HOM05D003121 ORTHO05D003535 4.9e-12 75.5 72 55.6
Ciclev10030221m.g Citrus clementina HOM05D003121 ORTHO05D003535 4.9e-12 75.5 70 57.1
ECA234G0462 Erigeron canadensis HOM05D003121 ORTHO05D003535 4.9e-12 75.5 72 55.6
Hund00013 Selenicereus undatus HOM05D003121 ORTHO05D003535 4.9e-12 75.5 70 55.7
Thhalv10004704m.g Eutrema salsugineum HOM05D003121 ORTHO05D003535 6.4e-12 75.1 71 56.3
Sed0012540 Sechium edule HOM05D003121 ORTHO05D003535 6.4e-12 75.1 70 57.1
THA.LOC104819658 Tarenaya hassleriana HOM05D003121 ORTHO05D003535 6.4e-12 75.1 71 56.3
CANSAT80G1118 Cannabis sativa HOM05D003121 ORTHO05D003535 8.3e-12 74.7 77 51.9
MD05G1124900 Malus domestica HOM05D003121 ORTHO05D003535 8.3e-12 74.7 85 54.1
SGA_v2.0_scaffold195G40810 Striga asiatica HOM05D003121 ORTHO05D003535 8.3e-12 74.7 86 48.8
TWI60G0855 Tripterygium wilfordii HOM05D003121 ORTHO05D003535 8.3e-12 74.7 71 53.5
Lsat_1_v5_gn_4_72000 Lactuca sativa HOM05D003121 ORTHO05D003535 1.1e-11 74.3 72 52.8
RcHm_v2.0_Chr6g0278841 Rosa chinensis HOM05D003121 ORTHO05D003535 1.1e-11 74.3 82 53.7
A06p34540 Brassica napus HOM05D000059 ORTHO05D003535 1.4e-11 73.9 71 54.9
AL6G34890 Arabidopsis lyrata HOM05D003121 ORTHO05D003535 1.9e-11 73.6 71 56.3
BolC7t44923H Brassica oleracea HOM05D003121 ORTHO05D003535 1.9e-11 73.6 71 54.9
CANSAT25G2722 Cannabis sativa HOM05D003121 ORTHO05D003535 1.9e-11 73.6 80 48.8
EL10Ac9g21341 Beta vulgaris HOM05D003121 ORTHO05D003535 2.4e-11 73.2 70 54.3
CDE09G1210 Ceratophyllum demersum HOM05D003121 ORTHO05D003535 2.4e-11 73.2 69 56.5
FAN14G3468 Fragaria x ananassa HOM05D003121 ORTHO05D003535 2.4e-11 73.2 78 52.6
Peaxi162Scf00793g00345 Petunia axillaris HOM05D003121 ORTHO05D003535 2.4e-11 73.2 86 48.8
Sp2g23600 Schrenkiella parvula HOM05D003121 ORTHO05D003535 2.4e-11 73.2 71 54.9
MSTRG.27630 Avicennia marina HOM05D003121 ORTHO05D003535 3.2e-11 72.8 88 45.5
CAN.G756.31 Capsicum annuum HOM05D003121 ORTHO05D003535 3.2e-11 72.8 87 47.1
COL.COLO4_17374 Corchorus olitorius HOM05D003121 ORTHO05D003535 3.2e-11 72.8 70 55.7
Haze_00809 Corylus avellana HOM05D003121 ORTHO05D003535 3.2e-11 72.8 72 56.9
Glyma.20G106400 Glycine max HOM05D003121 ORTHO05D003535 3.2e-11 72.8 70 54.3
vmacro13056 Vaccinium macrocarpon HOM05D003121 ORTHO05D003535 3.2e-11 72.8 85 49.4
arahy.Tifrunner.gnm1.ann1.LP37DI Arachis hypogaea HOM05D003121 ORTHO05D003535 4.1e-11 72.4 83 50.6
arahy.Tifrunner.gnm1.ann1.TJ1SRC Arachis hypogaea HOM05D003121 ORTHO05D003535 4.1e-11 72.4 83 50.6
Dinv41919 Davidia involucrata HOM05D003121 ORTHO05D003535 4.1e-11 72.4 72 54.2
FAN23G2561 Fragaria x ananassa HOM05D003121 ORTHO05D003535 4.1e-11 72.4 85 48.2
SHI04584 Sapria himalayana HOM05D003121 ORTHO05D003535 4.1e-11 72.4 70 52.9
CiPaw.02G071300 Carya illinoinensis HOM05D003121 ORTHO05D003535 5.4e-11 72.0 72 54.2
Hma1.2p1_0032F.1_g019220 Hydrangea macrophylla HOM05D003121 ORTHO05D003535 5.4e-11 72.0 72 54.2
Nitab4.5_0002341g0030 Nicotiana tabacum HOM05D003121 ORTHO05D003535 5.4e-11 72.0 86 46.5
PSO223G0054 Papaver somniferum HOM05D003121 ORTHO05D003535 5.4e-11 72.0 70 54.3
Phvul.007G017900 Phaseolus vulgaris HOM05D003121 ORTHO05D003535 5.4e-11 72.0 70 52.9
VMungo0720G1452 Vigna mungo HOM05D003121 ORTHO05D003535 5.4e-11 72.0 70 52.9
CARHR189980 Cardamine hirsuta HOM05D003121 ORTHO05D003535 7.0e-11 71.6 85 49.4
Cpa.g.sc14.232 Carica papaya HOM05D003121 ORTHO05D003535 7.0e-11 71.6 71 50.7
Cc09_g10310 Coffea canephora HOM05D003121 ORTHO05D003535 7.0e-11 71.6 70 52.9
FAN13G2513 Fragaria x ananassa HOM05D003121 ORTHO05D003535 7.0e-11 71.6 71 53.5
FAN16G1234 Fragaria x ananassa HOM05D003121 ORTHO05D003535 7.0e-11 71.6 77 50.6
Hma1.2p1_0163F.1_g072700 Hydrangea macrophylla HOM05D003121 ORTHO05D003535 7.0e-11 71.6 72 55.6
Lj5g0004060 Lotus japonicus HOM05D003121 ORTHO05D003535 7.0e-11 71.6 70 52.9
Medtr1g112910 Medicago truncatula HOM05D003121 ORTHO05D003535 7.0e-11 71.6 70 52.9
QL11p052350 Quercus lobata HOM05D003121 ORTHO05D003535 7.0e-11 71.6 72 54.2
Solyc01g088730.3 Solanum lycopersicum HOM05D003121 ORTHO05D003535 7.0e-11 71.6 70 52.9
ECA236G3931 Erigeron canadensis HOM05D003121 ORTHO05D003535 9.2e-11 71.2 87 49.4
Migut.N01332 Erythranthe guttata HOM05D003121 ORTHO05D003535 9.2e-11 71.2 72 50.0
PSO223G0083 Papaver somniferum HOM05D003121 ORTHO05D003535 9.2e-11 71.2 70 54.3
CSS0021302 Camellia sinensis var. sinensis HOM05D003121 ORTHO05D003535 1.2e-10 70.9 70 54.3
Carub.0006s2137 Capsella rubella HOM05D003121 ORTHO05D003535 1.2e-10 70.9 71 53.5
Ca_03297_v3 Cicer arietinum L. HOM05D003121 ORTHO05D003535 1.2e-10 70.9 71 52.1
FvH4_3g08280 Fragaria vesca HOM05D003121 ORTHO05D003535 1.2e-10 70.9 71 54.9
FAN11G1820 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.2e-10 70.9 71 54.9
TPR.G2486 Trifolium pratense HOM05D003121 ORTHO05D003535 1.2e-10 70.9 70 52.9
Aa31LG10G14410 Aethionema arabicum HOM05D003121 ORTHO05D003535 1.6e-10 70.5 71 52.1
FvH4_1g17321 Fragaria vesca HOM05D003121 ORTHO05D003535 1.6e-10 70.5 71 54.9
FAN19G1977 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.6e-10 70.5 71 54.9
Manes.15G059200 Manihot esculenta HOM05D003121 ORTHO05D003535 1.6e-10 70.5 70 51.4
PSO732G0110 Papaver somniferum HOM05D003121 ORTHO05D003535 1.6e-10 70.5 73 57.5
Potri.009G138100 Populus trichocarpa HOM05D003121 ORTHO05D003535 1.6e-10 70.5 70 52.9
Sopen01g035570 Solanum pennellii HOM05D003121 ORTHO05D003535 1.6e-10 70.5 70 51.4
PGSC0003DMG401001724 Solanum tuberosum HOM05D003121 ORTHO05D003535 1.6e-10 70.5 70 51.4
Lalb_Chr06g0163731 Lupinus albus HOM05D003121 ORTHO05D003535 2.0e-10 70.1 72 52.8
PSO210G5475 Papaver somniferum HOM05D003121 ORTHO05D003535 2.0e-10 70.1 74 52.7
AT5G23590 Arabidopsis thaliana HOM05D003121 ORTHO05D003535 2.7e-10 69.7 71 53.5
Eucgr.L03152 Eucalyptus grandis HOM05D003121 ORTHO05D003535 2.7e-10 69.7 84 50.0
PSO675G3506 Papaver somniferum HOM05D003121 ORTHO05D003535 2.7e-10 69.7 73 57.5
Psat6g232680 Pisum sativum HOM05D003121 ORTHO05D003535 2.7e-10 69.7 70 51.4
PGSC0003DMG401018151 Solanum tuberosum HOM05D003121 ORTHO05D003535 2.7e-10 69.7 91 41.8
Ah.01g023230 Amaranthus hybridus HOM05D003121 ORTHO05D003535 3.5e-10 69.3 69 52.2
AUR62010208 Chenopodium quinoa HOM05D003121 ORTHO05D003535 3.5e-10 69.3 66 54.5
HanXRQChr10g0298091 Helianthus annuus HOM05D003121 ORTHO05D003535 3.5e-10 69.3 70 50.0
Nitab4.5_0000563g0090 Nicotiana tabacum HOM05D003121 ORTHO05D003535 3.5e-10 69.3 159 35.8
Rhsim01G0025300 Rhododendron simsii HOM05D003121 ORTHO05D003535 3.5e-10 69.3 84 47.6
DCAR_020020 Daucus carota HOM05D003121 ORTHO05D003535 4.6e-10 68.9 85 48.2
unitig_746.g26872 Utricularia gibba HOM05D003121 ORTHO05D003535 4.6e-10 68.9 86 45.3
FAN09G1988 Fragaria x ananassa HOM05D003121 ORTHO05D003535 6.0e-10 68.6 78 52.6
FAN20G1288 Fragaria x ananassa HOM05D003121 ORTHO05D003535 6.0e-10 68.6 70 52.9
HanXRQChr02g0035631 Helianthus annuus HOM05D003121 ORTHO05D003535 6.0e-10 68.6 71 53.5
Sabra09G0107000 Salix brachista HOM05D003121 ORTHO05D003535 6.0e-10 68.6 70 51.4
Thecc.02G055800 Theobroma cacao HOM05D003121 ORTHO05D003535 6.0e-10 68.6 83 49.4
Gohir.D01G161400 Gossypium hirsutum HOM05D003121 ORTHO05D003535 7.8e-10 68.2 70 52.9
Gorai.002G200100 Gossypium raimondii HOM05D003121 ORTHO05D003535 7.8e-10 68.2 70 52.9
Duzib052G0361 Durio zibethinus HOM05D003121 ORTHO05D003535 1.0e-09 67.8 83 49.4
FvH4_2g15640 Fragaria vesca HOM05D003121 ORTHO05D003535 1.0e-09 67.8 70 52.9
FAN21G2867 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.0e-09 67.8 72 55.6
FAN24G0024 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.0e-09 67.8 70 52.9
Solyc04g015090.3 Solanum lycopersicum HOM05D003121 ORTHO05D003535 1.0e-09 67.8 71 53.5
Sopen04g007110 Solanum pennellii HOM05D003121 ORTHO05D003535 1.0e-09 67.8 71 53.5
FAN26G1946 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.3e-09 67.4 69 53.6
PSO223G0032 Papaver somniferum HOM05D003121 ORTHO05D003535 1.3e-09 67.4 70 51.4
MBI15_g18375_MAGBIO Magnolia biondii HOM05D000140 ORTHO05D000087 1.7e-09 67.0 68 52.9
PSO135G0399 Papaver somniferum HOM05D003121 ORTHO05D003535 1.7e-09 67.0 70 51.4
SEGI_06864 Sequoiadendron giganteum HOM05D003121 ORTHO05D003535 1.7e-09 67.0 69 46.4
PGSC0003DMG400009335 Solanum tuberosum HOM05D003121 ORTHO05D003535 1.7e-09 67.0 71 49.3
PGSC0003DMG400015012 Solanum tuberosum HOM05D003121 ORTHO05D003535 1.7e-09 67.0 71 52.1
CSS0049142 Camellia sinensis var. sinensis HOM05D003121 ORTHO05D003535 2.3e-09 66.6 70 50.0
CAN.G475.3 Capsicum annuum HOM05D003121 ORTHO05D003535 2.3e-09 66.6 74 50.0
DCAR_014082 Daucus carota HOM05D003121 ORTHO05D003535 2.3e-09 66.6 66 53.0
SGA_v2.0_scaffold207G41938 Striga asiatica HOM05D003121 ORTHO05D003535 2.3e-09 66.6 86 44.2
Gohir.A01G170400 Gossypium hirsutum HOM05D003121 ORTHO05D003535 3.0e-09 66.2 69 52.2
ECA240G2719 Erigeron canadensis HOM05D003121 ORTHO05D003535 3.9e-09 65.9 71 47.9
FvH4_3g08271 Fragaria vesca HOM05D003121 ORTHO05D003535 3.9e-09 65.9 70 48.6
ATR0661G016 Amborella trichopoda HOM05D003121 ORTHO05D003535 5.0e-09 65.5 69 49.3
Actinidia39167 Actinidia chinensis HOM05D003121 ORTHO05D003535 6.6e-09 65.1 70 48.6
FAN28G1504 Fragaria x ananassa HOM05D003121 ORTHO05D003535 6.6e-09 65.1 70 45.7
Peaxi162Scf00444g00017 Petunia axillaris HOM05D003121 ORTHO05D003535 6.6e-09 65.1 69 52.2
DCAR_029977 Daucus carota HOM05D003121 ORTHO05D003535 8.6e-09 64.7 70 47.1
FAN05G2525 Fragaria x ananassa HOM05D003121 ORTHO05D003535 8.6e-09 64.7 73 46.6
FAN05G3028 Fragaria x ananassa HOM05D003121 ORTHO05D003535 8.6e-09 64.7 73 46.6
Solyc12g056890.1 Solanum lycopersicum HOM05D003121 ORTHO05D003535 8.6e-09 64.7 71 50.7
FAN12G2403 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.5e-08 63.9 76 53.9
FAN12G2867 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.5e-08 63.9 76 53.9
FAN26G0110 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.5e-08 63.9 70 45.7
DCAR_029118 Daucus carota HOM05D003121 ORTHO05D003535 1.9e-08 63.5 82 42.7
FAN02G3834 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.9e-08 63.5 73 46.6
FvH4_6g22510 Fragaria vesca HOM05D003121 ORTHO05D003535 3.3e-08 62.8 95 41.1
FAN14G0526 Fragaria x ananassa HOM05D003121 ORTHO05D003535 3.3e-08 62.8 95 41.1
PSO339G5273 Papaver somniferum HOM05D003121 ORTHO05D003535 5.6e-08 62.0 71 45.1
FvH4_4g18840 Fragaria vesca HOM05D013646 ORTHO05D015661 7.3e-08 61.6 75 53.3
BcaNung05203 Brassica carinata HOM05D003121 ORTHO05D003535 1.6e-07 60.5 83 45.8
Carub.0005s1712 Capsella rubella HOM05D003121 ORTHO05D003535 1.6e-07 60.5 74 47.3
Hund16712 Selenicereus undatus HOM05D003121 ORTHO05D003535 2.1e-07 60.1 69 49.3
CSS0039474 Camellia sinensis var. sinensis HOM05D003121 ORTHO05D003535 2.8e-07 59.7 66 47.0
FvH4_1g17320 Fragaria vesca HOM05D003121 ORTHO05D003535 4.7e-07 58.9 68 45.6
Os03g0136800 Oryza sativa ssp. japonica HOM05D003121 ORTHO05D003535 6.2e-07 58.5 69 50.7
ECA240G3367 Erigeron canadensis HOM05D000003 ORTHO05D000004 8.0e-07 58.2 77 42.9
Aqoxy7G02828 Aquilegia oxysepala HOM05D003121 ORTHO05D003535 3.1e-06 56.2 74 45.9
Zm00001eb002940 Zea mays HOM05D003121 ORTHO05D003535 4.0e-06 55.8 69 47.8
ECA248G3157 Erigeron canadensis HOM05D000200 ORTHO05D000262 8.9e-06 54.7 66 45.5


User provided reference genes

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