Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G5148 Fragaria x ananassa HOM05D008101 ORTHO05D010163 2.7e-46 188.3 96 100.0
FvH4_6g48300 Fragaria vesca HOM05D008101 ORTHO05D010163 1.0e-45 186.4 96 99.0
FAN09G0090 Fragaria x ananassa HOM05D008101 ORTHO05D010163 1.0e-45 186.4 96 99.0
FAN02G2446 Fragaria x ananassa HOM05D008101 ORTHO05D010163 4.5e-38 161.0 136 67.6
RcHm_v2.0_Chr2g0167501 Rosa chinensis HOM05D008101 ORTHO05D010163 3.7e-16 88.2 49 95.9
RcHm_v2.0_Chr2g0167541 Rosa chinensis HOM05D008101 ORTHO05D010163 3.7e-16 88.2 49 95.9
FAN09G1556 Fragaria x ananassa HOM05D008101 ORTHO05D010163 6.4e-16 87.4 48 100.0
RcHm_v2.0_Chr2g0167591 Rosa chinensis HOM05D008101 ORTHO05D010163 1.4e-15 86.3 49 93.9
FAN05G3293 Fragaria x ananassa HOM05D008101 ORTHO05D010163 9.2e-15 83.6 57 78.9
Dinv33773 Davidia involucrata HOM05D008101 ORTHO05D010163 1.1e-12 76.6 49 77.6
Manes.02G047600 Manihot esculenta HOM05D008101 ORTHO05D010163 1.5e-12 76.3 49 79.6
Thecc.04G085600 Theobroma cacao HOM05D008101 ORTHO05D010163 1.9e-12 75.9 49 77.6
CSS0047461 Camellia sinensis var. sinensis HOM05D008101 ORTHO05D010163 3.3e-12 75.1 49 73.5
Gohir.D07G212050 Gossypium hirsutum HOM05D008101 ORTHO05D010163 3.3e-12 75.1 49 75.5
Gorai.001G239800 Gossypium raimondii HOM05D008101 ORTHO05D010163 3.3e-12 75.1 49 75.5
Gohir.A07G206000 Gossypium hirsutum HOM05D008101 ORTHO05D010163 4.3e-12 74.7 49 73.5
CiPaw.03G024700 Carya illinoinensis HOM05D008101 ORTHO05D010163 7.3e-12 73.9 49 77.6
FAN05G0138 Fragaria x ananassa HOM05D000576 ORTHO05D010163 1.6e-11 72.8 41 97.6
FAN23G1982 Fragaria x ananassa HOM05D000576 ORTHO05D010163 1.6e-11 72.8 41 97.6
Potri.010G234200 Populus trichocarpa HOM05D008101 ORTHO05D010163 2.8e-11 72.0 49 75.5
Cc07_g03530 Coffea canephora HOM05D008101 ORTHO05D010163 3.6e-11 71.6 49 73.5
Migut.H00938 Erythranthe guttata HOM05D008101 ORTHO05D010163 4.0e-10 68.2 49 71.4
Nn4g23220 Nelumbo nucifera HOM05D008101 ORTHO05D010163 2.6e-09 65.5 49 65.3
PGR083G0374 Punica granatum HOM05D008101 ORTHO05D010163 2.6e-09 65.5 49 67.3
Rhsim10G0036400 Rhododendron simsii HOM05D018356 ORTHO05D010163 2.6e-09 65.5 49 67.3
Prupe.3G265300 Prunus persica HOM05D008101 ORTHO05D010163 5.8e-09 64.3 49 67.3
MD09G1053300 Malus domestica HOM05D008101 ORTHO05D010163 9.9e-09 63.5 49 67.3
Phvul.004G030000 Phaseolus vulgaris HOM05D008101 ORTHO05D010163 1.7e-08 62.8 49 65.3
Medtr6g012640 Medicago truncatula HOM05D008101 ORTHO05D010163 2.9e-08 62.0 49 67.3
Glyma.13G062100 Glycine max HOM05D008101 ORTHO05D010163 3.8e-08 61.6 49 67.3
SEGI_19148 Sequoiadendron giganteum HOM05D008101 ORTHO05D010163 3.8e-08 61.6 48 64.6
Aqoxy3G03441 Aquilegia oxysepala HOM05D008101 ORTHO05D010163 4.9e-08 61.2 51 64.7
EL10Ac9g21543 Beta vulgaris HOM05D008101 ORTHO05D010163 6.4e-08 60.8 49 61.2
Sed0001905 Sechium edule HOM05D008101 ORTHO05D010163 6.4e-08 60.8 49 65.3
CAN.G206.165 Capsicum annuum HOM05D008101 ORTHO05D010163 1.1e-07 60.1 49 61.2
SalBow1G0549 Salvia bowleyana HOM05D008101 ORTHO05D010163 1.1e-07 60.1 49 67.3
SalBow1G6176 Salvia bowleyana HOM05D008101 ORTHO05D010163 1.1e-07 60.1 49 67.3
SalBow8G3752 Salvia bowleyana HOM05D008101 ORTHO05D010163 1.9e-07 59.3 49 67.3
Nn3g17291 Nelumbo nucifera HOM05D008101 ORTHO05D010163 2.4e-07 58.9 49 57.1
Os04g0460350 Oryza sativa ssp. japonica HOM05D008101 ORTHO05D010163 3.2e-07 58.5 49 59.2
Sopen02g032840 Solanum pennellii HOM05D008101 ORTHO05D010163 5.4e-07 57.8 49 59.2
THA.LOC109116617 Tarenaya hassleriana HOM05D008101 ORTHO05D010163 7.1e-07 57.4 47 61.7
Lsat_1_v5_gn_4_179321 Lactuca sativa HOM05D008101 ORTHO05D010163 1.2e-06 56.6 49 61.2
Lsat_1_v5_gn_4_179600 Lactuca sativa HOM05D008101 ORTHO05D010163 2.1e-06 55.8 52 59.6
Lsat_1_v5_gn_4_182661 Lactuca sativa HOM05D008101 ORTHO05D010163 2.7e-06 55.5 49 59.2
Carub.0007s3631 Capsella rubella HOM05D008101 ORTHO05D010163 3.5e-06 55.1 47 61.7
MBI02_g12271_MAGBIO Magnolia biondii HOM05D008101 ORTHO05D010163 3.5e-06 55.1 65 47.7


User provided reference genes

Program Settings