Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G4986 Fragaria x ananassa HOM05D007471 ORTHO05D009481 1.2e-132 476.5 238 100.0
FvH4_6g40230 Fragaria vesca HOM05D007471 ORTHO05D009481 5.1e-131 471.1 238 99.6
FAN05G3962 Fragaria x ananassa HOM05D007471 ORTHO05D009481 3.2e-125 451.8 238 96.2
FAN09G1454 Fragaria x ananassa HOM05D007471 ORTHO05D009481 4.6e-124 448.0 238 94.5
RcHm_v2.0_Chr2g0155251 Rosa chinensis HOM05D007471 ORTHO05D009481 3.7e-121 438.3 238 91.2
MD17G1121200 Malus domestica HOM05D007471 ORTHO05D009481 3.1e-96 355.5 238 73.5
MD17G1122600 Malus domestica HOM05D007471 ORTHO05D009481 9.1e-96 354.0 238 73.1
FAN02G2672 Fragaria x ananassa HOM05D007471 ORTHO05D009481 7.0e-88 327.8 238 73.9
QL04p066931 Quercus lobata HOM05D007471 ORTHO05D009481 6.5e-78 294.7 242 59.9
Dinv05327 Davidia involucrata HOM05D007471 ORTHO05D009481 8.5e-78 294.3 244 61.1
TAR626G0037 Trochodendron aralioides HOM05D007471 ORTHO05D009481 1.8e-75 286.6 243 57.6
Haze_12583 Corylus avellana HOM05D007471 ORTHO05D009481 1.6e-71 273.5 242 61.2
Manes.12G067200 Manihot esculenta HOM05D007471 ORTHO05D009481 1.6e-71 273.5 243 58.0
Ciclev10016450m.g Citrus clementina HOM05D007471 ORTHO05D009481 7.7e-71 271.2 244 59.0
CSS0003771 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 1.3e-70 270.4 244 55.7
Lj8A138T38 Lonicera japonica HOM05D007471 ORTHO05D009481 3.8e-70 268.9 244 55.7
Hma1.2p1_0599F.1_g186930 Hydrangea macrophylla HOM05D007471 ORTHO05D009481 2.1e-68 263.1 244 55.3
Cpa.g.sc136.59 Carica papaya HOM05D007471 ORTHO05D009481 3.6e-68 262.3 243 53.5
TWI36G0936 Tripterygium wilfordii HOM05D007471 ORTHO05D009481 1.4e-67 260.4 243 56.0
Actinidia12353 Actinidia chinensis HOM05D007471 ORTHO05D009481 3.0e-67 259.2 243 55.1
Prupe.3G192700 Prunus persica HOM05D007471 ORTHO05D009481 1.5e-66 256.9 171 76.0
Nn1g07565 Nelumbo nucifera HOM05D007471 ORTHO05D009481 8.3e-65 251.1 241 52.3
Rhsim06G0179200 Rhododendron simsii HOM05D000358 ORTHO05D001562 2.4e-64 249.6 242 53.3
Eucgr.K01386 Eucalyptus grandis HOM05D007471 ORTHO05D009481 4.1e-64 248.8 244 53.3
Peaxi162Scf00359g00320 Petunia axillaris HOM05D007471 ORTHO05D009481 4.1e-64 248.8 241 51.9
Nitab4.5_0003086g0070 Nicotiana tabacum HOM05D007471 ORTHO05D009481 7.0e-64 248.1 243 51.9
Sed0023252 Sechium edule HOM05D007471 ORTHO05D009481 1.2e-63 247.3 244 51.2
Lj6g0025127 Lotus japonicus HOM05D007471 ORTHO05D009481 5.9e-63 245.0 243 51.0
Lalb_Chr10g0094201 Lupinus albus HOM05D007471 ORTHO05D009481 7.8e-63 244.6 242 52.1
Sopen07g023700 Solanum pennellii HOM05D007471 ORTHO05D009481 1.0e-62 244.2 243 51.9
Solyc07g045150.3 Solanum lycopersicum HOM05D007471 ORTHO05D009481 5.0e-62 241.9 243 51.9
Sc21g0000400 Simmondsia chinensis HOM05D007471 ORTHO05D009481 6.6e-62 241.5 245 53.1
Glyma.09G086000 Glycine max HOM05D007471 ORTHO05D009481 1.5e-61 240.4 242 49.6
PGSC0003DMG402017414 Solanum tuberosum HOM05D007471 ORTHO05D009481 4.3e-61 238.8 243 51.4
CsaV3_7G002330 Cucumis sativus L. HOM05D007471 ORTHO05D009481 5.6e-61 238.4 247 49.4
MELO3C024177.2 Cucumis melo HOM05D007471 ORTHO05D009481 7.3e-61 238.0 247 49.8
Glyma.15G195100 Glycine max HOM05D007471 ORTHO05D009481 1.6e-60 236.9 242 49.6
Psat1g019920 Pisum sativum HOM05D007471 ORTHO05D009481 4.7e-60 235.3 243 49.8
CARHR082340 Cardamine hirsuta HOM05D007471 ORTHO05D009481 1.0e-59 234.2 243 48.1
PSO210G0038 Papaver somniferum HOM05D007471 ORTHO05D009481 1.4e-59 233.8 243 48.6
THA.LOC104819026 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 1.8e-59 233.4 246 51.2
GSVIVG01030129001 Vitis vinifera HOM05D007471 ORTHO05D009481 5.2e-59 231.9 240 51.7
MSTRG.6626 Avicennia marina HOM05D007471 ORTHO05D009481 3.4e-58 229.2 240 49.2
PGR044G0015 Punica granatum HOM05D007471 ORTHO05D009481 4.4e-58 228.8 242 47.5
CAN.G826.3 Capsicum annuum HOM05D007471 ORTHO05D009481 1.7e-57 226.9 243 51.0
Migut.M00062 Erythranthe guttata HOM05D007471 ORTHO05D009481 1.7e-57 226.9 243 48.6
AL3G19000 Arabidopsis lyrata HOM05D007471 ORTHO05D009481 2.2e-57 226.5 243 46.1
BcaB03g14688 Brassica carinata HOM05D007471 ORTHO05D009481 2.2e-57 226.5 243 46.1
PSO210G4841 Papaver somniferum HOM05D007471 ORTHO05D009481 2.9e-57 226.1 245 47.3
MBI14_g27042_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 4.9e-57 225.3 233 50.6
Sp3g06580 Schrenkiella parvula HOM05D007471 ORTHO05D009481 1.1e-56 224.2 243 46.1
AT3G07640 Arabidopsis thaliana HOM05D007471 ORTHO05D009481 2.4e-56 223.0 243 45.3
Phvul.009G214800 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 7.0e-56 221.5 242 47.9
VMungo1309G3041 Vigna mungo HOM05D007471 ORTHO05D009481 2.0e-55 219.9 242 47.9
BolC3t16568H Brassica oleracea HOM05D007471 ORTHO05D009481 2.7e-55 219.5 243 48.1
Thhalv10021420m.g Eutrema salsugineum HOM05D007471 ORTHO05D009481 2.7e-55 219.5 243 46.9
ClCG02G003070 Citrullus lanatus HOM05D007471 ORTHO05D009481 3.5e-55 219.2 292 42.5
A03p35390 Brassica napus HOM05D007471 ORTHO05D009481 4.6e-55 218.8 243 47.3
BraA03t12717Z Brassica rapa HOM05D007471 ORTHO05D009481 4.6e-55 218.8 243 47.3
Cc05_g01930 Coffea canephora HOM05D007471 ORTHO05D009481 6.0e-55 218.4 246 49.2
Medtr2g049140 Medicago truncatula HOM05D007471 ORTHO05D009481 6.0e-55 218.4 240 47.1
Carub.0003s0722 Capsella rubella HOM05D007471 ORTHO05D009481 7.8e-55 218.0 245 45.7
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 1.0e-54 217.6 243 50.2
Lsat_1_v5_gn_9_102921 Lactuca sativa HOM05D007471 ORTHO05D009481 3.9e-54 215.7 241 46.5
BcaC01g04271 Brassica carinata HOM05D007471 ORTHO05D009481 6.6e-54 214.9 243 47.3
C03p43000 Brassica napus HOM05D007471 ORTHO05D009481 6.6e-54 214.9 243 47.3
Aa31LG5G18220 Aethionema arabicum HOM05D007471 ORTHO05D009481 8.6e-54 214.5 266 44.7
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 8.6e-54 214.5 218 50.9
HanXRQChr09g0257421 Helianthus annuus HOM05D007471 ORTHO05D009481 8.6e-54 214.5 242 47.5
SalBow7G1274 Salvia bowleyana HOM05D007471 ORTHO05D009481 2.8e-52 209.5 243 47.7
vmacro12060 Vaccinium macrocarpon HOM05D007471 ORTHO05D009481 6.2e-52 208.4 202 54.5
Atru.BG.43.p Acer truncatum HOM05D007471 ORTHO05D009481 8.9e-51 204.5 189 56.6
AUR62018237 Chenopodium quinoa HOM05D007471 ORTHO05D009481 2.0e-50 203.4 240 45.4
ECA240G3131 Erigeron canadensis HOM05D001349 ORTHO05D001980 1.3e-49 200.7 223 46.6
AUR62037766 Chenopodium quinoa HOM05D007471 ORTHO05D009481 3.7e-49 199.1 240 43.8
THA.LOC104822442 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 2.1e-47 193.4 246 45.5
CSS0004770 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 7.8e-47 191.4 169 58.0
Duzib133G1025 Durio zibethinus HOM05D007471 ORTHO05D009481 8.6e-46 188.0 251 44.6
ATR0751G158 Amborella trichopoda HOM05D007471 ORTHO05D009481 1.9e-45 186.8 241 42.3
Phvul.009G215100 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 1.9e-45 186.8 240 42.9
Thecc.01G199800 Theobroma cacao HOM05D007471 ORTHO05D009481 6.2e-44 181.8 247 44.5
Oeu000672.1 Olea europaea HOM05D007471 ORTHO05D009481 1.4e-43 180.6 201 46.8
Gorai.001G223900 Gossypium raimondii HOM05D007471 ORTHO05D009481 3.1e-43 179.5 249 43.4
Gohir.D07G199700 Gossypium hirsutum HOM05D007471 ORTHO05D009481 8.9e-43 177.9 249 43.0
DCAR_019662 Daucus carota HOM05D007471 ORTHO05D009481 2.0e-42 176.8 206 46.1
Gohir.A07G193500 Gossypium hirsutum HOM05D007471 ORTHO05D009481 2.0e-42 176.8 249 42.2
BcaB03g14686 Brassica carinata HOM05D007471 ORTHO05D009481 3.7e-41 172.6 184 47.8
COL.COLO4_19658 Corchorus olitorius HOM05D007471 ORTHO05D009481 1.4e-40 170.6 175 52.0
Zm00001eb245410 Zea mays HOM05D007471 ORTHO05D009481 9.2e-40 167.9 241 36.9
Os02g0582400 Oryza sativa ssp. japonica HOM05D007471 ORTHO05D009481 2.1e-39 166.8 239 36.8
TPR.G20279 Trifolium pratense HOM05D007471 ORTHO05D009481 1.3e-38 164.1 174 46.6
CDE11G0370 Ceratophyllum demersum HOM05D007471 ORTHO05D009481 3.3e-37 159.5 251 39.8
SHI10184 Sapria himalayana HOM05D007471 ORTHO05D009481 9.9e-34 147.9 165 46.1
TPR.G28406 Trifolium pratense HOM05D007471 ORTHO05D009481 2.2e-33 146.7 202 39.6
FAN05G5088 Fragaria x ananassa HOM05D000100 ORTHO05D000052 6.4e-33 145.2 69 98.6
MBI14_g39587_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 1.7e-30 137.1 238 35.7
SGA_v2.0_scaffold73G24486 Striga asiatica HOM05D007471 ORTHO05D009481 2.1e-28 130.2 240 34.6
SEGI_00651 Sequoiadendron giganteum HOM05D007471 ORTHO05D009481 1.2e-26 124.4 245 33.5
Peaxi162Scf00289g00310 Petunia axillaris HOM05D007471 ORTHO05D009481 7.6e-18 95.1 91 50.5
ClCG02G003080 Citrullus lanatus HOM05D007471 ORTHO05D009481 3.1e-11 73.2 77 48.1
Ah.10g032600 Amaranthus hybridus HOM05D007471 ORTHO05D009481 5.5e-08 62.4 66 48.5
MBI14_g37361_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 5.1e-06 55.8 57 49.1


User provided reference genes

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