Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 6.3e-193 677.2 320 100.0
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.6e-172 609.4 294 96.9
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.6e-164 582.8 277 97.8
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 6.6e-150 534.3 250 100.0
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 1.7e-142 509.6 250 95.2
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 5.4e-128 461.5 250 83.6
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 2.1e-127 459.5 250 82.8
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 1.0e-126 457.2 250 83.6
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 1.7e-126 456.4 250 82.8
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 2.3e-126 456.1 250 82.8
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 1.1e-125 453.8 250 81.6
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 2.5e-125 452.6 250 82.4
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 4.3e-125 451.8 250 82.4
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 4.3e-125 451.8 250 82.4
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 9.6e-125 450.7 250 80.4
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 2.1e-124 449.5 248 81.0
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 2.8e-124 449.1 250 80.0
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 2.4e-123 446.0 250 80.0
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 1.7e-121 439.9 250 80.4
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 6.4e-121 438.0 250 78.0
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 1.9e-120 436.4 251 79.7
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 1.2e-119 433.7 245 82.4
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 2.1e-119 433.0 251 76.9
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 2.7e-119 432.6 250 75.6
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 6.0e-119 431.4 251 75.7
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 7.9e-119 431.0 251 76.5
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 3.0e-118 429.1 251 76.1
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 6.7e-118 427.9 251 75.7
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 1.5e-117 426.8 251 75.7
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 5.6e-117 424.9 250 76.0
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 9.6e-117 424.1 250 77.2
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 2.8e-116 422.5 251 74.9
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 2.8e-116 422.5 250 76.0
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 4.8e-116 421.8 250 76.8
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 4.0e-115 418.7 246 76.0
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 9.0e-115 417.5 250 76.0
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 1.5e-114 416.8 252 75.8
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 5.8e-114 414.8 252 75.0
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 9.9e-114 414.1 252 74.6
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 1.3e-113 413.7 252 74.6
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 1.7e-113 413.3 250 76.4
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 1.7e-113 413.3 249 73.5
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 1.4e-112 410.2 251 75.7
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 1.9e-112 409.8 250 74.4
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 5.5e-112 408.3 250 72.8
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 5.5e-112 408.3 250 72.8
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 5.5e-112 408.3 250 72.8
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 9.3e-112 407.5 255 72.2
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 1.2e-111 407.1 250 73.2
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 1.6e-111 406.8 253 72.7
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 1.6e-111 406.8 252 71.8
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 4.6e-111 405.2 250 72.8
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 4.6e-111 405.2 252 72.2
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 1.3e-110 403.7 250 74.0
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 2.3e-110 402.9 250 72.4
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 5.1e-110 401.7 252 72.6
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 8.7e-110 401.0 250 71.2
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 1.1e-109 400.6 250 72.0
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.5e-109 400.2 250 72.4
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 3.3e-109 399.1 252 71.8
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 3.3e-109 399.1 250 70.4
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 7.4e-109 397.9 250 71.2
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 1.3e-108 397.1 252 71.4
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 1.3e-108 397.1 252 71.0
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 1.6e-108 396.7 250 70.4
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 1.6e-108 396.7 250 71.6
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 3.1e-107 392.5 250 68.4
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 9.0e-107 391.0 228 77.6
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 2.0e-106 389.8 250 73.2
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 2.6e-106 389.4 248 71.8
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 4.9e-105 385.2 250 69.6
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 6.5e-105 384.8 250 73.6
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 7.9e-103 377.9 262 66.8
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 3.9e-102 375.6 250 67.2
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 8.7e-102 374.4 253 66.4
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 8.7e-102 374.4 253 66.4
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 8.7e-102 374.4 253 66.4
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 8.7e-102 374.4 253 66.4
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 1.9e-101 373.2 252 66.7
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 2.5e-101 372.9 249 67.5
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 3.3e-101 372.5 246 68.3
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 4.3e-101 372.1 252 67.5
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 9.6e-101 370.9 250 65.2
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 1.3e-100 370.5 252 65.9
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 1.3e-100 370.5 251 66.9
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 1.4e-99 367.1 247 67.6
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 1.8e-99 366.7 252 65.1
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 3.1e-99 365.9 252 64.7
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 4.1e-99 365.5 245 67.8
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 9.0e-99 364.4 253 65.2
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 9.0e-99 364.4 252 65.5
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 4.5e-98 362.1 252 64.7
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 3.8e-97 359.0 252 64.7
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 4.2e-96 355.5 251 65.7
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 7.9e-95 351.3 203 75.9
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 9.7e-93 344.4 246 62.6
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 9.7e-93 344.4 254 62.2
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 3.8e-89 332.4 237 59.9
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 8.5e-89 331.3 154 98.1
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 1.1e-88 330.9 250 59.6
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 1.2e-79 300.8 245 58.4
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 7.9e-79 298.1 248 55.6
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 3.9e-78 295.8 247 54.7
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 1.5e-77 293.9 247 55.9
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 4.4e-77 292.4 247 55.5
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 1.4e-70 270.8 250 50.0
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 4.2e-64 249.2 139 84.2
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 1.2e-63 247.7 267 47.6
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 2.3e-62 243.4 251 45.4
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 5.5e-56 222.2 265 48.7
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 1.8e-54 217.2 282 44.3
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 4.9e-52 209.1 111 82.0
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 2.6e-45 186.8 99 88.9
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 6.0e-34 149.1 95 71.6
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 8.3e-28 128.6 108 61.1
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 1.5e-24 117.9 71 66.2
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 1.5e-21 107.8 151 45.0
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 4.4e-21 106.3 54 79.6
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 1.4e-19 101.3 53 77.4
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 6.9e-14 82.4 45 75.6
Mapoly0033s0071 Marchantia polymorpha HOM05D006599 ORTHO05D008304 8.7e-09 65.5 136 28.7
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 2.1e-07 60.8 106 34.9
FvH4_4g15570 Fragaria vesca HOM05D007529 ORTHO05D007451 5.3e-06 56.2 120 30.0


User provided reference genes

Program Settings