Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G4869 Fragaria x ananassa HOM05D001457 ORTHO05D001477 1.9e-49 198.7 93 100.0
FvH4_6g03570 Fragaria vesca HOM05D001457 ORTHO05D001477 1.5e-38 162.5 76 97.4
FAN14G3075 Fragaria x ananassa HOM05D000053 ORTHO05D000448 1.6e-32 142.5 76 84.2
FAN02G4430 Fragaria x ananassa HOM05D001457 ORTHO05D001477 2.1e-24 115.5 153 43.8
FAN05G0509 Fragaria x ananassa HOM05D000053 ORTHO05D000448 4.0e-23 111.3 62 80.6
RcHm_v2.0_Chr7g0217891 Rosa chinensis HOM05D001457 ORTHO05D001477 8.4e-21 103.6 154 40.3
FAN14G5060 Fragaria x ananassa HOM05D001457 ORTHO05D001477 2.5e-17 92.0 193 35.8
FvH4_6g03550 Fragaria vesca HOM05D001457 ORTHO05D001477 4.3e-17 91.3 43 90.7
RcHm_v2.0_Chr3g0461951 Rosa chinensis HOM05D001457 ORTHO05D001477 1.2e-16 89.7 44 86.4
RcHm_v2.0_Chr3g0461901 Rosa chinensis HOM05D001457 ORTHO05D001477 6.2e-16 87.4 44 84.1
RcHm_v2.0_Chr7g0217871 Rosa chinensis HOM05D001457 ORTHO05D001477 6.2e-16 87.4 44 84.1
MD12G1177700 Malus domestica HOM05D001457 ORTHO05D001477 5.8e-14 80.9 154 34.4
RcHm_v2.0_Chr3g0462021 Rosa chinensis HOM05D001457 ORTHO05D001477 5.8e-14 80.9 191 31.9
MD04G1164100 Malus domestica HOM05D001457 ORTHO05D001477 5.4e-12 74.3 98 41.8
Atru.chr8.2312 Acer truncatum HOM05D001457 ORTHO05D001477 1.1e-09 66.6 51 54.9
Prupe.6G283200 Prunus persica HOM05D001457 ORTHO05D001477 1.5e-09 66.2 44 63.6
Haze_21062 Corylus avellana HOM05D001457 ORTHO05D001477 4.3e-09 64.7 51 56.9
Ah.08g215260 Amaranthus hybridus HOM05D001457 ORTHO05D001477 1.6e-08 62.8 56 48.2
arahy.Tifrunner.gnm1.ann1.AK0I35 Arachis hypogaea HOM05D001457 ORTHO05D001477 2.1e-08 62.4 44 52.3
arahy.Tifrunner.gnm1.ann1.DHCY3G Arachis hypogaea HOM05D001457 ORTHO05D001477 2.1e-08 62.4 44 52.3
CANSAT35G0057 Cannabis sativa HOM05D001457 ORTHO05D001477 2.1e-08 62.4 44 56.8
CiPaw.09G213500 Carya illinoinensis HOM05D001457 ORTHO05D001477 2.1e-08 62.4 51 52.9
Cfa017135 Carpinus fangiana HOM05D001457 ORTHO05D001477 4.8e-08 61.2 51 54.9
Haze_21061 Corylus avellana HOM05D001457 ORTHO05D001477 1.1e-07 60.1 99 34.3
Glyma.07G154600 Glycine max HOM05D001457 ORTHO05D001477 1.1e-07 60.1 96 33.3
Glyma.06G218000 Glycine max HOM05D001457 ORTHO05D001477 1.4e-07 59.7 49 49.0
QL07p034193 Quercus lobata HOM05D001457 ORTHO05D001477 1.8e-07 59.3 51 52.9
Cpa.g.sc120.19 Carica papaya HOM05D001457 ORTHO05D001477 3.1e-07 58.5 104 30.8
VMungo0331G1052 Vigna mungo HOM05D001457 ORTHO05D001477 4.0e-07 58.2 46 50.0
Glyma.18G205300 Glycine max HOM05D001457 ORTHO05D001477 1.2e-06 56.6 51 45.1
Phvul.008G094200 Phaseolus vulgaris HOM05D001457 ORTHO05D001477 1.2e-06 56.6 51 47.1
RcHm_v2.0_Chr7g0217881 Rosa chinensis HOM05D001457 ORTHO05D001477 1.2e-06 56.6 40 65.0
VMungo1383G3114 Vigna mungo HOM05D001457 ORTHO05D001477 1.2e-06 56.6 51 47.1
Thecc.05G008900 Theobroma cacao HOM05D001457 ORTHO05D001477 1.5e-06 56.2 44 56.8
Ciclev10013816m.g Citrus clementina HOM05D001457 ORTHO05D001477 2.6e-06 55.5 43 55.8
Duzib128G1735 Durio zibethinus HOM05D001457 ORTHO05D001477 2.6e-06 55.5 43 53.5
Potri.006G103000 Populus trichocarpa HOM05D001457 ORTHO05D001477 2.6e-06 55.5 44 52.3
RcHm_v2.0_Chr3g0461911 Rosa chinensis HOM05D001457 ORTHO05D001477 2.6e-06 55.5 33 75.8
Manes.08G095600 Manihot esculenta HOM05D001457 ORTHO05D001477 4.4e-06 54.7 44 52.3
Glyma.03G050700 Glycine max HOM05D001457 ORTHO05D001477 7.6e-06 53.9 46 47.8
Actinidia20756 Actinidia chinensis HOM05D001457 ORTHO05D001477 9.9e-06 53.5 43 53.5


User provided reference genes

Program Settings