Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G4635 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.2e-92 341.3 166 100.0
FvH4_6g07350 Fragaria vesca HOM05D002813 ORTHO05D003203 3.6e-51 205.3 111 92.8
FvH4_6g10180 Fragaria vesca HOM05D004619 ORTHO05D003203 1.3e-37 160.2 113 76.1
FAN14G2999 Fragaria x ananassa HOM05D004619 ORTHO05D003203 1.3e-37 160.2 113 76.1
FAN14G4978 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-37 159.8 113 73.5
FvH4_6g06400 Fragaria vesca HOM05D002813 ORTHO05D003203 2.0e-25 119.8 73 78.1
FAN02G0224 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-24 116.7 113 60.2
FAN21G3097 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-24 116.7 122 55.7
FAN21G2418 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.3e-23 110.9 119 54.6
FAN05G3268 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.1e-21 105.1 72 75.0
RcHm_v2.0_Chr5g0073471 Rosa chinensis HOM05D002813 ORTHO05D003203 6.3e-19 98.2 108 53.7
FAN09G1205 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-18 97.4 70 74.3
FAN05G4830 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.1e-18 95.9 137 42.3
FAN09G4302 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.1e-18 95.9 135 43.0
RcHm_v2.0_Chr6g0306251 Rosa chinensis HOM05D002813 ORTHO05D003203 9.0e-18 94.4 75 62.7
FAN02G4625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-17 93.6 137 41.6
FvH4_3g40700 Fragaria vesca HOM05D002813 ORTHO05D003203 2.6e-17 92.8 111 52.3
FAN11G0908 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-17 92.8 111 52.3
RcHm_v2.0_Chr6g0307021 Rosa chinensis HOM05D002813 ORTHO05D003203 3.4e-17 92.4 114 50.0
FAN21G1994 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.9e-17 91.7 111 51.4
FvH4_5g12200 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-16 90.9 114 50.0
FAN04G3192 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-16 90.9 115 47.8
FAN05G2846 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-16 90.9 60 75.0
FAN21G0510 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-16 90.9 116 48.3
FvH4_6g11570 Fragaria vesca HOM05D002813 ORTHO05D003203 1.3e-16 90.5 74 62.2
FAN14G2467 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-16 90.5 74 62.2
FAN25G0311 Fragaria x ananassa HOM05D000808 ORTHO05D000863 1.3e-16 90.5 116 48.3
FAN02G4465 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-16 89.7 114 47.4
FAN25G1955 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.9e-16 89.4 111 51.4
FAN27G3388 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.9e-16 89.4 110 45.5
RcHm_v2.0_Chr6g0307031 Rosa chinensis HOM05D002813 ORTHO05D003203 5.0e-16 88.6 118 50.0
FAN16G0815 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.5e-16 88.2 111 51.4
FAN25G3517 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.5e-16 88.2 122 47.5
FvH4_5g12240 Fragaria vesca HOM05D002813 ORTHO05D003203 8.5e-16 87.8 112 50.0
FAN04G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.5e-16 87.8 114 48.2
RcHm_v2.0_Chr2g0157391 Rosa chinensis HOM05D002813 ORTHO05D003203 1.1e-15 87.4 99 50.5
FvH4_6g41671 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-15 87.0 114 47.4
FAN13G3008 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-15 87.0 112 49.1
FAN05G5767 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-15 86.7 114 46.5
FvH4_3g21760 Fragaria vesca HOM05D002813 ORTHO05D003203 2.5e-15 86.3 80 57.5
FAN11G3977 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.5e-15 86.3 80 57.5
FAN20G2843 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.5e-15 86.3 74 62.2
FvH4_7g29850 Fragaria vesca HOM05D002813 ORTHO05D003203 3.2e-15 85.9 122 48.4
FAN06G0128 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.2e-15 85.9 118 49.2
FAN14G5169 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.2e-15 85.9 118 49.2
FAN18G4233 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.2e-15 85.5 112 49.1
MSTRG.9106 Avicennia marina HOM05D002813 ORTHO05D003203 5.5e-15 85.1 115 47.0
FvH4_2g35000 Fragaria vesca HOM05D002813 ORTHO05D003203 5.5e-15 85.1 117 50.4
FvH4_5g33281 Fragaria vesca HOM05D002813 ORTHO05D003203 5.5e-15 85.1 100 50.0
FAN18G3306 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.5e-15 85.1 98 50.0
FvH4_3g00150 Fragaria vesca HOM05D002813 ORTHO05D003203 7.2e-15 84.7 119 45.4
FAN18G2017 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.2e-15 84.7 100 50.0
RcHm_v2.0_Chr7g0185371 Rosa chinensis HOM05D002813 ORTHO05D003203 7.2e-15 84.7 110 44.5
FAN02G0699 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.4e-15 84.3 118 48.3
FAN06G0370 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.4e-15 84.3 118 48.3
FAN25G2464 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.4e-15 84.3 118 48.3
FAN04G3253 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-14 84.0 112 48.2
FAN16G2005 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-14 84.0 80 55.0
FAN27G1144 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-14 84.0 117 48.7
FAN27G1742 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-14 84.0 116 46.6
FAN02G4209 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-14 83.6 118 48.3
FAN15G0916 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-14 83.6 117 48.7
FvH4_7g07300 Fragaria vesca HOM05D002813 ORTHO05D003203 2.1e-14 83.2 120 45.0
FAN02G3428 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.1e-14 83.2 114 49.1
FAN18G3569 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.7e-14 82.8 98 49.0
FvH4_2g37241 Fragaria vesca HOM05D002813 ORTHO05D003203 3.6e-14 82.4 117 47.0
FvH4_3g11280 Fragaria vesca HOM05D002813 ORTHO05D003203 3.6e-14 82.4 120 44.2
FvH4_5g12160 Fragaria vesca HOM05D002813 ORTHO05D003203 3.6e-14 82.4 110 50.0
FAN01G2630 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-14 82.4 120 44.2
FAN04G2105 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-14 82.4 110 50.0
FAN08G1174 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-14 82.4 110 50.0
FAN13G2791 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.9e-14 81.3 110 49.1
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 7.9e-14 81.3 114 42.1
SGA_v2.0_scaffold103G30003 Striga asiatica HOM05D002813 ORTHO05D003203 7.9e-14 81.3 118 44.1
FvH4_5g12190 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-13 80.9 100 47.0
FAN18G2715 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-13 80.9 100 47.0
FAN27G2509 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-13 80.9 115 45.2
FAN20G2873 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-13 80.5 115 45.2
FvH4_5g19260 Fragaria vesca HOM05D002813 ORTHO05D003203 1.8e-13 80.1 74 59.5
FAN08G0212 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-13 80.1 125 40.8
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 1.8e-13 80.1 114 43.0
FvH4_2g34980 Fragaria vesca HOM05D002813 ORTHO05D003203 2.3e-13 79.7 115 45.2
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 3.0e-13 79.3 118 41.5
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-13 79.3 118 41.5
FAN27G0414 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-13 79.3 116 46.6
FAN04G1304 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.9e-13 79.0 74 60.8
FAN20G0435 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.9e-13 79.0 116 46.6
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 5.1e-13 78.6 117 42.7
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 5.1e-13 78.6 114 41.2
FAN18G2037 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.8e-13 77.8 74 58.1
FAN18G2831 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.8e-13 77.8 74 58.1
FAN18G1460 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-12 77.0 115 44.3
FAN27G2003 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-12 77.0 116 44.8
Sc23g0005220 Simmondsia chinensis HOM05D002813 ORTHO05D003203 2.0e-12 76.6 115 43.5
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.5e-12 76.3 114 43.0
FAN27G2375 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.5e-12 76.3 118 41.5
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 2.5e-12 76.3 114 43.0
FAN18G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.3e-12 75.9 100 45.0
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 3.3e-12 75.9 114 38.6
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.4e-12 74.7 111 41.4
Ciclev10010367m.g Citrus clementina HOM05D002813 ORTHO05D003203 9.7e-12 74.3 117 44.4
FAN13G0265 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-11 73.9 99 43.4
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-11 73.9 118 41.5
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 1.7e-11 73.6 111 39.6
CiPaw.07G204200 Carya illinoinensis HOM05D002813 ORTHO05D003203 2.2e-11 73.2 114 41.2
FAN15G3400 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-11 73.2 116 43.1
FAN21G2238 Fragaria x ananassa HOM05D000437 ORTHO05D003203 2.2e-11 73.2 73 56.2
FAN06G2895 Fragaria x ananassa HOM05D000201 ORTHO05D007118 2.8e-11 72.8 127 42.5
FvH4_2g32530 Fragaria vesca HOM05D002813 ORTHO05D003203 3.7e-11 72.4 120 40.8
FvH4_2g32630 Fragaria vesca HOM05D002813 ORTHO05D003203 3.7e-11 72.4 111 40.5
FvH4_7g18342 Fragaria vesca HOM05D002813 ORTHO05D003203 3.7e-11 72.4 127 42.5
FAN06G4693 Fragaria x ananassa HOM05D000201 ORTHO05D007118 3.7e-11 72.4 127 42.5
FAN21G0006 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-11 72.4 118 43.2
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-11 72.4 120 40.8
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 4.8e-11 72.0 111 38.7
FAN15G2356 Fragaria x ananassa HOM05D002813 ORTHO05D000003 8.2e-11 71.2 116 42.2
Manes.16G075500 Manihot esculenta HOM05D002813 ORTHO05D003203 1.1e-10 70.9 114 41.2
RcHm_v2.0_Chr5g0073461 Rosa chinensis HOM05D002813 ORTHO05D003203 1.1e-10 70.9 71 50.7
FvH4_2g32511 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-10 70.5 117 41.0
FAN04G0910 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-10 70.5 114 42.1
FvH4_5g10370 Fragaria vesca HOM05D002813 ORTHO05D003203 1.8e-10 70.1 68 51.5
Dinv27902 Davidia involucrata HOM05D002813 ORTHO05D003203 2.4e-10 69.7 114 43.9
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 2.4e-10 69.7 114 39.5
FAN27G1770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.4e-10 69.7 120 43.3
RcHm_v2.0_Chr3g0468781 Rosa chinensis HOM05D002813 ORTHO05D003203 2.4e-10 69.7 78 51.3
Potri.006G238300 Populus trichocarpa HOM05D002813 ORTHO05D003203 3.1e-10 69.3 117 41.0
CAN.G400.3 Capsicum annuum HOM05D002813 ORTHO05D003203 4.1e-10 68.9 111 39.6
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 4.1e-10 68.9 111 43.2
FAN18G4406 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.3e-10 68.6 96 41.7
FvH4_2g32520 Fragaria vesca HOM05D002813 ORTHO05D003203 9.1e-10 67.8 115 42.6
FvH4_2g34990 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-09 67.4 97 45.4
Nn2g11622 Nelumbo nucifera HOM05D002813 ORTHO05D003203 1.2e-09 67.4 114 41.2
Actinidia14674 Actinidia chinensis HOM05D002813 ORTHO05D003203 1.5e-09 67.0 106 42.5
FAN15G1989 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-09 67.0 111 39.6
Gohir.D05G048500 Gossypium hirsutum HOM05D002813 ORTHO05D003203 2.0e-09 66.6 111 37.8
FAN18G0728 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-09 66.2 107 41.1
Gohir.A05G046700 Gossypium hirsutum HOM05D002813 ORTHO05D003203 2.6e-09 66.2 111 37.8
Mapoly0100s0050 Marchantia polymorpha HOM05D002813 ORTHO05D003203 2.6e-09 66.2 106 39.6
FvH4_1g05120 Fragaria vesca HOM05D002813 ORTHO05D003203 3.4e-09 65.9 115 40.9
Peaxi162Scf00227g00722 Petunia axillaris HOM05D002813 ORTHO05D003203 5.9e-09 65.1 99 39.4
FvH4_5g09361 Fragaria vesca HOM05D002813 ORTHO05D003203 7.7e-09 64.7 113 38.9
FAN19G0454 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-08 63.9 147 35.4
Gorai.009G049800 Gossypium raimondii HOM05D002813 ORTHO05D003203 2.2e-08 63.2 111 36.9
FAN13G0724 Fragaria x ananassa HOM05D001362 ORTHO05D001310 2.9e-08 62.8 112 38.4
RcHm_v2.0_Chr7g0185401 Rosa chinensis HOM05D002813 ORTHO05D003203 3.8e-08 62.4 76 53.9
FAN05G0887 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.0e-08 62.0 72 55.6
TWI63G1080 Tripterygium wilfordii HOM05D002813 ORTHO05D003203 6.5e-08 61.6 141 35.5
FvH4_6g15310 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-07 60.8 70 52.9
FAN02G3770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-07 60.8 70 52.9
Cc08_g09560 Coffea canephora HOM05D002813 ORTHO05D003203 1.4e-07 60.5 97 41.2
FAN09G1014 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-07 60.5 70 51.4
FAN18G1397 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-07 60.5 87 47.1
FvH4_5g12211 Fragaria vesca HOM05D002813 ORTHO05D003203 1.9e-07 60.1 71 47.9
FAN25G3196 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-07 60.1 76 50.0
FvH4_3g11250 Fragaria vesca HOM05D002813 ORTHO05D003203 2.5e-07 59.7 77 48.1
FvH4_5g12191 Fragaria vesca HOM05D002813 ORTHO05D003203 2.5e-07 59.7 79 46.8
CAN.G953.3 Capsicum annuum HOM05D002813 ORTHO05D003203 3.2e-07 59.3 99 36.4
FAN20G1057 Fragaria x ananassa HOM05D002813 ORTHO05D000003 4.2e-07 58.9 116 37.9
GSVIVG01035624001 Vitis vinifera HOM05D002813 ORTHO05D003203 4.2e-07 58.9 114 38.6
RcHm_v2.0_Chr7g0185381 Rosa chinensis HOM05D002813 ORTHO05D003203 7.2e-07 58.2 73 50.7
Atru.chr7.2088 Acer truncatum HOM05D002813 ORTHO05D003203 9.4e-07 57.8 89 40.4
CSS0022259 Camellia sinensis var. sinensis HOM05D002813 ORTHO05D003203 9.4e-07 57.8 72 51.4
TAR626G1934 Trochodendron aralioides HOM05D002813 ORTHO05D003203 2.7e-06 56.2 104 36.5
SEGI_23038 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 3.6e-06 55.8 108 35.2
ATR0705G192 Amborella trichopoda HOM05D002813 ORTHO05D003203 6.1e-06 55.1 111 36.9
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 6.1e-06 55.1 77 37.7


User provided reference genes

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