Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.1e-66 256.5 136 100.0
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 6.6e-59 230.7 124 99.2
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.5e-58 228.8 122 99.2
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 3.6e-57 224.9 122 96.7
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 4.4e-55 218.0 122 94.3
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 1.2e-47 193.4 122 89.3
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 3.6e-20 102.1 116 59.5
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 3.9e-19 98.6 117 58.1
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 1.3e-14 83.6 118 49.2
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 3.8e-14 82.0 124 47.6
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 5.0e-14 81.6 100 54.0
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 1.9e-13 79.7 104 49.0
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 5.5e-13 78.2 130 47.7
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 7.2e-13 77.8 116 50.0
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 7.2e-13 77.8 115 51.3
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 1.6e-12 76.6 99 48.5
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 2.1e-12 76.3 110 45.5
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 2.7e-12 75.9 109 46.8
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 6.1e-12 74.7 119 46.2
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 1.0e-11 73.9 95 50.5
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 1.0e-11 73.9 116 49.1
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 1.4e-11 73.6 64 67.2
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 2.3e-11 72.8 71 56.3
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 3.0e-11 72.4 106 44.3
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 3.9e-11 72.0 70 57.1
Aa31LG2G3920 Aethionema arabicum HOM05D007413 ORTHO05D009357 6.7e-11 71.2 112 42.9
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 6.7e-11 71.2 99 43.4
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 1.5e-10 70.1 68 55.9
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 1.5e-10 70.1 84 50.0
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 1.5e-10 70.1 114 43.9
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 2.0e-10 69.7 74 50.0
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 2.6e-10 69.3 106 43.4
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 2.6e-10 69.3 60 61.7
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 3.3e-10 68.9 67 53.7
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 4.4e-10 68.6 104 46.2
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 5.7e-10 68.2 89 46.1
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 7.4e-10 67.8 110 44.5
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 9.7e-10 67.4 74 48.6
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 9.7e-10 67.4 59 57.6
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 9.7e-10 67.4 59 57.6
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 1.7e-09 66.6 118 44.1
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 2.2e-09 66.2 113 39.8
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.8e-09 65.9 65 55.4
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.8e-09 65.9 65 55.4
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 2.8e-09 65.9 120 43.3
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 2.8e-09 65.9 68 51.5
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 4.8e-09 65.1 62 54.8
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 6.3e-09 64.7 73 54.8
Carub.0007s3668 Capsella rubella HOM05D007413 ORTHO05D009357 8.2e-09 64.3 99 40.4
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 8.2e-09 64.3 63 50.8
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 8.2e-09 64.3 60 55.0
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 1.1e-08 63.9 114 41.2
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 1.1e-08 63.9 64 51.6
AL5G19460 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 1.4e-08 63.5 109 41.3
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 1.4e-08 63.5 79 50.6
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 1.8e-08 63.2 97 40.2
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 1.8e-08 63.2 125 40.8
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 2.4e-08 62.8 63 50.8
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 2.4e-08 62.8 57 54.4
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 2.4e-08 62.8 62 53.2
AT3G29370 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 3.1e-08 62.4 102 42.2
Lsat_1_v5_gn_4_171221 Lactuca sativa HOM05D007413 ORTHO05D009357 4.1e-08 62.0 58 60.3
PGR004G0469 Punica granatum HOM05D007413 ORTHO05D009357 7.0e-08 61.2 115 41.7
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 9.1e-08 60.8 104 45.2
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 9.1e-08 60.8 118 38.1
AT5G39240 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 1.2e-07 60.5 112 42.0
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 1.5e-07 60.1 98 40.8
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 1.5e-07 60.1 118 38.1
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 2.0e-07 59.7 63 49.2
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.6e-07 59.3 103 42.7
CARHR263170 Cardamine hirsuta HOM05D007413 ORTHO05D009357 2.6e-07 59.3 74 45.9
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 3.4e-07 58.9 96 42.7
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 3.4e-07 58.9 50 62.0
Carub.0005s0809 Capsella rubella HOM05D007413 ORTHO05D009357 4.5e-07 58.5 97 41.2
BcaB06g27281 Brassica carinata HOM05D007413 ORTHO05D009357 5.9e-07 58.2 108 37.0
Sc14g0006230 Simmondsia chinensis HOM05D007413 ORTHO05D009357 7.7e-07 57.8 54 48.1
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 1.0e-06 57.4 56 53.6
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 1.0e-06 57.4 98 37.8
Lalb_Chr02g0158971 Lupinus albus HOM05D007413 ORTHO05D009357 1.3e-06 57.0 93 46.2
Lalb_Chr21g0318381 Lupinus albus HOM05D007413 ORTHO05D009357 1.7e-06 56.6 71 47.9
SGA_v2.0_scaffold52G19169 Striga asiatica HOM05D007413 ORTHO05D009357 2.2e-06 56.2 116 37.9
ATR0064G025 Amborella trichopoda HOM05D007413 ORTHO05D009357 2.9e-06 55.8 98 37.8
DCAR_011043 Daucus carota HOM05D007413 ORTHO05D009357 2.9e-06 55.8 82 39.0
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 3.8e-06 55.5 101 39.6
BcaC02g09685 Brassica carinata HOM05D007413 ORTHO05D009357 6.5e-06 54.7 108 37.0
A04p11950 Brassica napus HOM05D007413 ORTHO05D009357 6.5e-06 54.7 111 36.0
C04p45600 Brassica napus HOM05D007413 ORTHO05D009357 6.5e-06 54.7 108 37.0
BolC4t26142H Brassica oleracea HOM05D007413 ORTHO05D009357 6.5e-06 54.7 108 37.0
BraA04t16860Z Brassica rapa HOM05D007413 ORTHO05D009357 6.5e-06 54.7 111 36.0
THA.LOC104825781 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 6.5e-06 54.7 84 42.9
Aa31LG9G16690 Aethionema arabicum HOM05D007413 ORTHO05D009357 8.5e-06 54.3 57 52.6
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 8.5e-06 54.3 96 39.6


User provided reference genes

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