Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 0.0e+00 1107.0 568 100.0
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 6.8e-307 1056.6 568 95.8
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 8.6e-302 1039.6 567 95.1
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 5.8e-282 973.8 521 97.3
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 9.9e-258 893.3 563 84.4
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 2.4e-171 606.3 559 61.0
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 6.0e-170 601.7 568 59.5
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 1.2e-165 587.4 575 56.3
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 1.5e-160 570.5 564 57.4
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 1.1e-158 564.3 558 56.6
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 5.8e-157 558.5 564 56.6
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 2.4e-155 553.1 556 55.9
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 1.0e-153 547.7 572 54.0
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 2.3e-153 546.6 565 55.4
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 5.1e-153 545.4 511 58.1
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 5.1e-153 545.4 566 54.8
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 2.8e-151 539.7 549 55.9
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 3.1e-150 536.2 378 73.5
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 9.9e-149 531.2 566 53.9
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 1.4e-147 527.3 587 52.1
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 2.1e-146 523.5 498 59.0
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 7.8e-146 521.5 569 52.9
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 1.0e-145 521.2 550 54.0
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 1.3e-143 514.2 546 53.3
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 1.3e-143 514.2 580 51.0
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 3.6e-143 512.7 549 54.5
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 6.9e-142 508.4 571 52.7
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 6.9e-142 508.4 563 51.7
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 9.0e-142 508.1 569 52.0
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 2.0e-141 506.9 565 51.7
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 2.0e-141 506.9 572 51.2
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 2.6e-141 506.5 572 51.7
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 2.6e-141 506.5 567 52.9
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 3.4e-141 506.1 566 51.8
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 3.4e-141 506.1 564 51.2
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 2.9e-140 503.1 559 51.7
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 2.9e-140 503.1 568 51.2
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 4.9e-140 502.3 568 51.8
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 8.4e-140 501.5 560 50.9
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 1.1e-139 501.1 582 50.7
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 1.1e-139 501.1 572 51.0
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 2.4e-139 500.0 549 52.8
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 2.4e-139 500.0 559 51.0
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 3.2e-139 499.6 596 50.2
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 3.2e-139 499.6 562 52.8
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 5.4e-139 498.8 547 52.8
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 1.2e-138 497.7 572 50.7
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 1.6e-138 497.3 592 50.3
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 7.9e-138 495.0 556 50.9
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 1.8e-137 493.8 573 51.3
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 2.3e-137 493.4 552 51.3
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 1.9e-136 490.3 550 52.0
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 2.5e-136 490.0 519 54.1
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 7.4e-136 488.4 550 50.5
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 2.1e-135 486.9 565 50.8
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 1.2e-133 481.1 565 49.2
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 6.4e-132 475.3 569 49.0
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 3.2e-131 473.0 569 47.3
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 3.5e-130 469.5 560 49.3
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 7.9e-130 468.4 568 48.2
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 1.0e-129 468.0 572 49.0
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 1.0e-129 468.0 572 49.0
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 8.7e-129 464.9 521 51.8
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 1.5e-128 464.2 518 52.5
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 8.2e-127 458.4 564 49.6
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 2.8e-119 433.3 562 48.2
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 8.2e-119 431.8 506 48.2
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 2.6e-117 426.8 537 45.6
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 7.7e-117 425.2 560 47.5
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 9.7e-112 408.3 568 43.7
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 2.4e-110 403.7 566 45.6
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 6.3e-103 379.0 564 40.8
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 9.1e-102 375.2 378 56.3
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 2.5e-99 367.1 366 54.4
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 2.3e-97 360.5 306 63.4
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 4.5e-93 346.3 575 38.8
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 2.2e-92 344.0 501 41.1
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 8.0e-90 335.5 547 41.9
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 8.0e-90 335.5 393 52.9
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 3.1e-86 323.6 389 50.6
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 1.7e-84 317.8 372 50.5
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 4.7e-82 309.7 560 36.6
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 2.9e-76 290.4 388 48.7
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 2.8e-66 257.3 568 32.0
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 7.8e-45 186.0 191 53.4
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 8.1e-34 149.4 175 49.1
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 4.0e-33 147.1 122 60.7
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 1.3e-31 142.1 193 45.1
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 6.2e-26 123.2 130 51.5
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 3.2e-22 110.9 128 48.4
PGSC0003DMG400033855 Solanum tuberosum HOM05D007729 ORTHO05D009724 1.4e-09 68.9 68 54.4


User provided reference genes

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