Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G4345 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.3e-88 328.9 172 100.0
FvH4_6g48431 Fragaria vesca HOM05D008847 ORTHO05D000368 2.7e-81 305.4 160 100.0
RcHm_v2.0_Chr2g0168251 Rosa chinensis HOM05D000576 ORTHO05D000368 4.0e-53 211.8 181 65.2
FAN14G2376 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.6e-47 191.4 142 71.1
FvH4_6g48330 Fragaria vesca HOM05D008847 ORTHO05D000368 1.6e-46 189.9 193 56.0
RcHm_v2.0_Chr2g0167641 Rosa chinensis HOM05D000576 ORTHO05D000368 2.5e-39 166.0 140 60.7
RcHm_v2.0_Chr2g0167551 Rosa chinensis HOM05D000576 ORTHO05D000368 3.4e-36 155.6 179 49.2
RcHm_v2.0_Chr2g0167601 Rosa chinensis HOM05D000576 ORTHO05D000368 1.7e-35 153.3 140 57.1
FvH4_6g47821 Fragaria vesca HOM05D000576 ORTHO05D000368 1.9e-31 139.8 193 42.5
FAN05G2407 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.4e-29 132.9 140 49.3
FAN14G3739 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.1e-26 124.0 193 39.9
FAN09G4808 Fragaria x ananassa HOM05D008847 ORTHO05D000368 9.3e-26 120.9 115 53.0
RcHm_v2.0_Chr5g0047501 Rosa chinensis HOM05D008847 ORTHO05D000368 6.1e-25 118.2 148 50.0
FAN02G1311 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.0e-24 115.9 115 53.0
FAN09G3608 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.1e-24 115.2 147 44.2
FAN09G2824 Fragaria x ananassa HOM05D000576 ORTHO05D000368 9.7e-23 110.9 91 67.0
FAN02G4373 Fragaria x ananassa HOM05D008847 ORTHO05D000368 8.2e-22 107.8 138 45.7
FvH4_6g48151 Fragaria vesca HOM05D000576 ORTHO05D000368 5.3e-21 105.1 119 48.7
RcHm_v2.0_Chr2g0166621 Rosa chinensis HOM05D000576 ORTHO05D000368 7.2e-18 94.7 120 48.3
RcHm_v2.0_Chr2g0167681 Rosa chinensis HOM05D008847 ORTHO05D000368 2.7e-17 92.8 92 55.4
FvH4_7g25361 Fragaria vesca HOM05D008847 ORTHO05D000368 3.0e-16 89.4 150 41.3
FAN05G2544 Fragaria x ananassa HOM05D008847 ORTHO05D016304 3.0e-16 89.4 156 41.0
FAN06G2118 Fragaria x ananassa HOM05D008847 ORTHO05D016304 3.0e-16 89.4 150 41.3
FAN09G3072 Fragaria x ananassa HOM05D001529 ORTHO05D000368 3.0e-16 89.4 219 34.2
Prupe.3G259800 Prunus persica HOM05D000576 ORTHO05D000368 1.1e-15 87.4 121 42.1
FAN06G3184 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.5e-15 87.0 165 38.2
RcHm_v2.0_Chr3g0476161 Rosa chinensis HOM05D000576 ORTHO05D000368 2.0e-15 86.7 152 38.8
FAN01G0010 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.6e-15 86.3 155 38.1
FAN03G0347 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.6e-15 86.3 165 38.2
FAN06G2140 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.6e-15 86.3 165 38.2
FAN05G3417 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.7e-14 82.4 141 41.8
FAN14G0812 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.1e-13 80.9 153 37.3
FAN03G0578 Fragaria x ananassa HOM05D008847 ORTHO05D000368 9.1e-13 77.8 128 41.4
FAN10G0027 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.0e-12 76.6 97 49.5
FAN15G1135 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.0e-12 76.6 67 55.2
FvH4_6g48180 Fragaria vesca HOM05D000576 ORTHO05D000368 1.0e-11 74.3 52 65.4
FAN03G1143 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.2e-11 73.2 116 40.5
FAN06G2289 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.0e-11 72.0 128 41.4
FAN10G0882 Fragaria x ananassa HOM05D000576 ORTHO05D000368 6.5e-11 71.6 122 40.2
RcHm_v2.0_Chr5g0008761 Rosa chinensis HOM05D008847 ORTHO05D045484 6.5e-11 71.6 152 32.2
FAN06G0982 Fragaria x ananassa HOM05D000576 ORTHO05D000368 8.5e-11 71.2 128 40.6
Sabra17G0081300 Salix brachista HOM05D000576 ORTHO05D000368 1.1e-10 70.9 146 38.4
FAN01G2751 Fragaria x ananassa HOM05D008847 ORTHO05D000368 5.5e-10 68.6 120 40.0
FvH4_6g44020 Fragaria vesca HOM05D008847 ORTHO05D000368 7.2e-10 68.2 147 36.7
Potri.017G092301 Populus trichocarpa HOM05D008175 ORTHO05D000368 7.2e-10 68.2 148 37.2
FAN06G5009 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.2e-09 67.4 133 38.3
Potri.016G106650 Populus trichocarpa HOM05D016710 ORTHO05D015329 1.2e-09 67.4 141 36.9
FvH4_7g27481 Fragaria vesca HOM05D008847 ORTHO05D000368 3.6e-09 65.9 133 37.6
Psat3g004120 Pisum sativum HOM05D009500 ORTHO05D000368 6.1e-09 65.1 126 32.5
FAN05G4147 Fragaria x ananassa HOM05D008847 ORTHO05D000368 8.0e-09 64.7 98 42.9
FAN06G1177 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.8e-08 63.5 127 39.4
TPR.G4714 Trifolium pratense HOM05D009500 ORTHO05D000368 2.3e-08 63.2 135 29.6
TPR.G7001 Trifolium pratense HOM05D009500 ORTHO05D000368 5.2e-08 62.0 130 33.1
TPR.G4771 Trifolium pratense HOM05D009500 ORTHO05D000368 6.7e-08 61.6 126 31.7
TPR.G4800 Trifolium pratense HOM05D009500 ORTHO05D000368 6.7e-08 61.6 134 29.9
Potri.016G106600 Populus trichocarpa HOM05D016710 ORTHO05D015329 8.8e-08 61.2 115 39.1
TPR.G9274 Trifolium pratense HOM05D009500 ORTHO05D000368 1.5e-07 60.5 131 30.5
Os11g0532600 Oryza sativa ssp. japonica HOM05D008868 ORTHO05D000368 2.0e-07 60.1 130 37.7
TPR.G4783 Trifolium pratense HOM05D009500 ORTHO05D000368 2.6e-07 59.7 153 30.7
DCAR_023416 Daucus carota HOM05D000576 ORTHO05D000368 3.3e-07 59.3 129 37.2
COL.COLO4_38129 Corchorus olitorius HOM05D015521 ORTHO05D015329 5.7e-07 58.5 114 34.2
Migut.C01273 Erythranthe guttata HOM05D000576 ORTHO05D000368 5.7e-07 58.5 99 34.3
TPR.G6942 Trifolium pratense HOM05D009500 ORTHO05D000368 5.7e-07 58.5 142 31.7
FAN24G2401 Fragaria x ananassa HOM05D000576 ORTHO05D000368 7.4e-07 58.2 75 44.0
TPR.G6938 Trifolium pratense HOM05D009500 ORTHO05D000368 9.7e-07 57.8 129 31.0
Ca_09502_v3 Cicer arietinum L. HOM05D009500 ORTHO05D000368 1.3e-06 57.4 151 29.8
Os02g0105800 Oryza sativa ssp. japonica HOM05D008868 ORTHO05D011164 1.7e-06 57.0 129 33.3
Prupe.3G259300 Prunus persica HOM05D008847 ORTHO05D000368 1.7e-06 57.0 144 34.0
TAR365G0708 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.2e-06 56.6 150 30.7


User provided reference genes

Program Settings