Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 4.0e-159 564.7 281 100.0
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 5.5e-124 448.0 285 83.5
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 7.4e-121 437.6 267 88.0
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.2e-118 430.3 260 87.7
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.8e-114 416.4 292 78.8
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 5.7e-89 331.6 261 68.2
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 9.7e-89 330.9 247 74.1
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 2.4e-87 326.2 263 67.3
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 2.6e-86 322.8 261 67.0
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 1.2e-83 313.9 164 96.3
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 6.7e-82 308.1 252 65.5
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 2.0e-81 306.6 259 66.0
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 1.7e-80 303.5 258 65.5
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 3.7e-80 302.4 251 66.1
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 4.8e-80 302.0 253 65.6
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 6.3e-80 301.6 256 65.2
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 4.1e-79 298.9 261 63.6
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 3.5e-78 295.8 260 65.8
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 4.5e-78 295.4 263 66.2
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 2.9e-77 292.7 257 63.8
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 2.9e-77 292.7 256 62.9
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 5.0e-77 292.0 259 64.5
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 8.5e-77 291.2 258 62.4
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 1.5e-76 290.4 244 64.3
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 1.9e-76 290.0 259 62.5
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 9.4e-76 287.7 261 63.2
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 2.7e-75 286.2 263 61.6
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 4.7e-75 285.4 262 59.9
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 6.1e-75 285.0 271 60.1
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 1.4e-74 283.9 261 62.5
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 6.8e-74 281.6 259 63.7
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 8.8e-74 281.2 250 60.8
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 4.4e-73 278.9 263 60.8
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 5.7e-73 278.5 223 65.0
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 1.3e-72 277.3 253 63.6
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 1.3e-72 277.3 256 60.5
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 6.3e-72 275.0 257 59.5
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.1e-71 274.2 255 58.4
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 1.1e-71 274.2 257 61.1
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 2.4e-71 273.1 255 60.0
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 3.1e-71 272.7 263 61.6
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 3.1e-71 272.7 255 61.2
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 4.1e-71 272.3 251 58.6
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 7.0e-71 271.6 265 58.1
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 1.2e-70 270.8 254 58.3
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 1.2e-70 270.8 255 62.0
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 2.7e-70 269.6 255 61.6
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.7e-70 269.6 251 57.8
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 5.9e-70 268.5 221 65.6
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 7.7e-70 268.1 256 62.1
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 7.7e-70 268.1 250 59.6
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 7.7e-70 268.1 250 59.6
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 7.7e-70 268.1 260 58.8
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 1.0e-69 267.7 261 59.0
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 1.0e-69 267.7 254 59.1
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 1.3e-69 267.3 272 57.0
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 2.9e-69 266.2 260 57.3
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 1.1e-68 264.2 264 58.0
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 1.5e-68 263.8 250 58.8
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 3.2e-68 262.7 254 57.1
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 3.2e-68 262.7 254 56.7
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 9.5e-68 261.2 262 57.3
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 2.1e-67 260.0 254 58.7
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 2.1e-67 260.0 252 59.9
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 2.1e-67 260.0 249 57.0
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 3.6e-67 259.2 249 61.8
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 4.7e-67 258.8 278 55.0
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 4.7e-67 258.8 261 57.1
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 6.1e-67 258.5 137 93.4
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 6.1e-67 258.5 189 69.8
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 8.0e-67 258.1 237 61.6
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 1.0e-66 257.7 261 55.9
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 1.0e-66 257.7 287 52.6
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 1.4e-66 257.3 261 57.5
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 1.4e-66 257.3 262 57.3
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 1.4e-66 257.3 264 55.7
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 1.4e-66 257.3 264 55.7
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 1.4e-66 257.3 254 59.1
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 5.2e-66 255.4 256 57.4
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 5.2e-66 255.4 263 58.2
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 5.2e-66 255.4 259 57.1
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 8.9e-66 254.6 254 57.9
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 1.5e-65 253.8 251 56.6
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 1.5e-65 253.8 251 55.0
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 1.5e-65 253.8 215 61.9
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 2.0e-65 253.4 254 57.9
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 3.4e-65 252.7 264 54.5
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 5.7e-65 251.9 265 57.0
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 5.4e-63 245.4 184 67.9
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 7.0e-63 245.0 263 53.2
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 1.2e-62 244.2 263 53.2
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 2.7e-62 243.0 251 51.8
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 7.8e-62 241.5 259 54.8
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 2.5e-60 236.5 187 62.6
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 2.1e-59 233.4 252 54.0
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 5.2e-58 228.8 169 66.9
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 1.2e-57 227.6 262 51.5
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 2.2e-56 223.4 254 51.2
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 1.1e-55 221.1 188 57.4
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 3.2e-55 219.5 202 59.4
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 3.2e-55 219.5 263 49.4
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 1.0e-53 214.5 242 53.3
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 1.4e-50 204.1 211 55.0
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 5.2e-50 202.2 148 70.3
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 1.2e-49 201.1 218 56.9
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 1.2e-49 201.1 148 70.9
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 1.7e-48 197.2 174 62.6
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 3.4e-41 172.9 194 47.4
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 7.5e-41 171.8 153 60.1
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 2.4e-39 166.8 157 59.9
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 2.7e-38 163.3 151 57.0
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 1.1e-36 157.9 173 44.5
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 2.5e-36 156.8 170 46.5
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 5.6e-36 155.6 141 58.2
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 4.7e-35 152.5 190 42.1
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 2.2e-24 117.1 99 62.6
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 3.8e-24 116.3 104 62.5
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 3.2e-23 113.2 68 75.0
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 1.3e-11 74.7 215 26.5
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 3.4e-09 66.6 123 33.3
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 3.8e-08 63.2 209 28.7


User provided reference genes

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