Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G4286 Fragaria x ananassa HOM05D008155 ORTHO05D010411 1.6e-83 312.8 160 100.0
FAN02G1576 Fragaria x ananassa HOM05D008155 ORTHO05D010411 2.7e-75 285.4 160 93.1
RcHm_v2.0_Chr3g0459031 Rosa chinensis HOM05D008155 ORTHO05D010411 4.3e-65 251.5 160 81.9
FAN09G0672 Fragaria x ananassa HOM05D008155 ORTHO05D029618 6.0e-35 151.4 89 92.1
FvH4_6g08770 Fragaria vesca HOM05D008155 ORTHO05D029618 7.8e-35 151.0 92 91.3
FAN05G1014 Fragaria x ananassa HOM05D008155 ORTHO05D029618 1.5e-33 146.7 89 92.1
Prupe.6G302400 Prunus persica HOM05D008155 ORTHO05D010411 4.2e-28 128.6 133 53.4
MD12G1197100 Malus domestica HOM05D008155 ORTHO05D010411 2.1e-24 116.3 142 47.9
QL03p011396 Quercus lobata HOM05D008155 ORTHO05D010411 1.1e-20 104.0 124 48.4
Cfa004403 Carpinus fangiana HOM05D008155 ORTHO05D010411 3.2e-20 102.4 164 42.7
CSS0018964 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 2.7e-19 99.4 105 54.3
MD04G1183800 Malus domestica HOM05D008155 ORTHO05D010411 2.7e-19 99.4 125 44.8
Haze_15003 Corylus avellana HOM05D008155 ORTHO05D010411 3.5e-19 99.0 113 51.3
CSS0011875 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 1.5e-17 93.6 112 47.3
Solyc01g102460.4 Solanum lycopersicum HOM05D008155 ORTHO05D010411 2.5e-17 92.8 119 47.1
Sopen01g044900 Solanum pennellii HOM05D008155 ORTHO05D010411 2.5e-17 92.8 119 47.1
TAR362G0658 Trochodendron aralioides HOM05D008155 ORTHO05D010411 3.7e-16 89.0 113 44.2
CANSAT54G1408 Cannabis sativa HOM05D008155 ORTHO05D010411 1.1e-15 87.4 161 42.2
Ciclev10029557m.g Citrus clementina HOM05D008155 ORTHO05D010411 1.8e-15 86.7 110 44.5
TAR365G0599 Trochodendron aralioides HOM05D008155 ORTHO05D010411 9.0e-15 84.3 104 45.2
Atru.chr12.1507 Acer truncatum HOM05D008155 ORTHO05D010411 3.4e-14 82.4 115 43.5
Atru.chr12.1502 Acer truncatum HOM05D008155 ORTHO05D010411 4.5e-14 82.0 116 44.0
Aqoxy7G02124 Aquilegia oxysepala HOM05D008155 ORTHO05D010411 4.5e-14 82.0 104 45.2
Manes.09G182600 Manihot esculenta HOM05D008155 ORTHO05D010411 1.3e-13 80.5 114 46.5
Glyma.19G224100 Glycine max HOM05D008155 ORTHO05D010411 1.7e-13 80.1 104 48.1
MSTRG.5176 Avicennia marina HOM05D008155 ORTHO05D010411 6.5e-13 78.2 87 48.3
Sed0023159 Sechium edule HOM05D008155 ORTHO05D010411 1.1e-12 77.4 120 43.3
Glyma.03G227200 Glycine max HOM05D008155 ORTHO05D010411 1.4e-12 77.0 142 39.4
Thecc.05G331400 Theobroma cacao HOM05D008155 ORTHO05D010411 1.4e-12 77.0 94 47.9
Manes.08G106200 Manihot esculenta HOM05D008155 ORTHO05D010411 1.9e-12 76.6 116 40.5
vmacro19804 Vaccinium macrocarpon HOM05D003050 ORTHO05D003513 5.5e-12 75.1 121 40.5
Migut.N00987 Erythranthe guttata HOM05D008155 ORTHO05D010411 9.3e-12 74.3 63 57.1
Hma1.2p1_0157F.1_g069510 Hydrangea macrophylla HOM05D008155 ORTHO05D010411 9.3e-12 74.3 131 40.5
PGSC0003DMG400018233 Solanum tuberosum HOM05D008155 ORTHO05D010411 1.6e-11 73.6 98 44.9
TWI56G0796 Tripterygium wilfordii HOM05D008155 ORTHO05D010411 1.6e-11 73.6 119 42.9
VMungo1383G2435 Vigna mungo HOM05D008155 ORTHO05D010411 2.1e-11 73.2 149 34.9
COL.COLO4_05473 Corchorus olitorius HOM05D008155 ORTHO05D010411 2.7e-11 72.8 152 37.5
Phvul.001G221000 Phaseolus vulgaris HOM05D008155 ORTHO05D010411 2.7e-11 72.8 120 39.2
EL10Ac6g15313 Beta vulgaris HOM05D008155 ORTHO05D010411 3.5e-11 72.4 96 45.8
Oeu034763.2 Olea europaea HOM05D008155 ORTHO05D010411 6.1e-11 71.6 98 45.9
SalBow8G5556 Salvia bowleyana HOM05D008155 ORTHO05D010411 6.1e-11 71.6 59 57.6
CsaV3_2G007430 Cucumis sativus L. HOM05D008155 ORTHO05D010411 3.9e-10 68.9 123 39.0
arahy.Tifrunner.gnm1.ann1.QRZ24D Arachis hypogaea HOM05D008155 ORTHO05D010411 6.7e-10 68.2 117 41.9
SalBow4G1718 Salvia bowleyana HOM05D008155 ORTHO05D010411 8.7e-10 67.8 97 40.2
SalBow4G2153 Salvia bowleyana HOM05D008155 ORTHO05D010411 8.7e-10 67.8 97 40.2
ClCG02G014570 Citrullus lanatus HOM05D008155 ORTHO05D010411 1.1e-09 67.4 112 42.0
MELO3C004141.2 Cucumis melo HOM05D008155 ORTHO05D010411 1.9e-09 66.6 129 37.2
DCAR_022333 Daucus carota HOM05D008155 ORTHO05D010411 2.5e-09 66.2 53 58.5
Gorai.013G241100 Gossypium raimondii HOM05D008155 ORTHO05D010411 3.3e-09 65.9 99 40.4
Lsat_1_v5_gn_5_146861 Lactuca sativa HOM05D008155 ORTHO05D010411 4.3e-09 65.5 135 37.0
TPR.G35721 Trifolium pratense HOM05D008155 ORTHO05D010411 5.7e-09 65.1 127 34.6
Potri.013G000200 Populus trichocarpa HOM05D008155 ORTHO05D010411 9.7e-09 64.3 115 37.4
Gohir.A13G206400 Gossypium hirsutum HOM05D008155 ORTHO05D010411 1.3e-08 63.9 99 39.4
Ah.03g147790 Amaranthus hybridus HOM05D008155 ORTHO05D010411 2.2e-08 63.2 95 37.9
Rhsim11G0107200 Rhododendron simsii HOM05D008155 ORTHO05D010411 6.3e-08 61.6 55 54.5
FAN17G0245 Fragaria x ananassa HOM05D008155 ORTHO05D029618 8.2e-08 61.2 64 60.9
Sed0026568 Sechium edule HOM05D008155 ORTHO05D010411 1.4e-07 60.5 113 38.9
Nitab4.5_0006193g0010 Nicotiana tabacum HOM05D008155 ORTHO05D010411 1.8e-07 60.1 46 60.9
Potri.005G001100 Populus trichocarpa HOM05D008155 ORTHO05D010411 5.3e-07 58.5 105 33.3
Lsat_1_v5_gn_1_75801 Lactuca sativa HOM05D008155 ORTHO05D010411 9.0e-07 57.8 96 41.7
Medtr7g111230 Medicago truncatula HOM05D008155 ORTHO05D010411 9.0e-07 57.8 51 49.0
Cpa.g.sc48.233 Carica papaya HOM05D008155 ORTHO05D010411 1.0e-05 54.3 110 36.4


User provided reference genes

Program Settings