Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G4261 Fragaria x ananassa HOM05D002460 ORTHO05D002716 3.6e-88 328.2 162 100.0
FvH4_6g45820 Fragaria vesca HOM05D002460 ORTHO05D002716 1.7e-40 169.9 206 55.8
FAN14G1596 Fragaria x ananassa HOM05D002460 ORTHO05D002716 2.2e-40 169.5 206 56.8
FAN05G1792 Fragaria x ananassa HOM05D002460 ORTHO05D002716 6.7e-34 147.9 206 51.5
FAN02G4324 Fragaria x ananassa HOM05D002460 ORTHO05D002716 9.7e-33 144.1 206 50.5
FAN09G2362 Fragaria x ananassa HOM05D002460 ORTHO05D002716 5.0e-29 131.7 205 49.3
RcHm_v2.0_Chr2g0164021 Rosa chinensis HOM05D002460 ORTHO05D002716 4.7e-19 98.6 206 41.3
Duzib187G0387 Durio zibethinus HOM05D002460 ORTHO05D002716 1.0e-18 97.4 206 37.9
Thecc.01G111400 Theobroma cacao HOM05D002460 ORTHO05D002716 1.4e-18 97.1 206 38.3
MD17G1069900 Malus domestica HOM05D002460 ORTHO05D002716 2.3e-18 96.3 204 36.8
COL.COLO4_11027 Corchorus olitorius HOM05D002460 ORTHO05D002716 3.0e-18 95.9 204 37.7
Duzib264G0777 Durio zibethinus HOM05D002460 ORTHO05D002716 3.0e-18 95.9 206 37.4
CiPaw.04G005600 Carya illinoinensis HOM05D002460 ORTHO05D002716 4.0e-18 95.5 204 35.8
MD09G1079500 Malus domestica HOM05D002460 ORTHO05D002716 4.0e-18 95.5 204 36.3
QL11p017890 Quercus lobata HOM05D002460 ORTHO05D002716 3.4e-17 92.4 204 35.3
Prupe.3G244800 Prunus persica HOM05D002460 ORTHO05D002716 2.2e-16 89.7 204 37.7
CiPaw.03G007600 Carya illinoinensis HOM05D002460 ORTHO05D002716 2.8e-16 89.4 204 35.3
Cfa007997 Carpinus fangiana HOM05D002460 ORTHO05D002716 8.3e-16 87.8 206 35.4
Lju237C0G7 Lonicera japonica HOM05D002460 ORTHO05D002716 8.3e-16 87.8 204 35.8
TWI60G1031 Tripterygium wilfordii HOM05D002460 ORTHO05D002716 1.8e-15 86.7 204 36.3
Gohir.D11G340500 Gossypium hirsutum HOM05D002460 ORTHO05D002716 3.1e-15 85.9 198 34.8
Haze_14074 Corylus avellana HOM05D002460 ORTHO05D002716 7.0e-15 84.7 206 37.4
Gorai.007G370400 Gossypium raimondii HOM05D002460 ORTHO05D002716 7.0e-15 84.7 198 34.8
Lsat_1_v5_gn_4_175101 Lactuca sativa HOM05D002460 ORTHO05D002716 9.1e-15 84.3 204 33.3
Gohir.A11G321400 Gossypium hirsutum HOM05D002460 ORTHO05D002716 4.5e-14 82.0 198 34.3
Nitab4.5_0001982g0040 Nicotiana tabacum HOM05D002460 ORTHO05D002716 4.5e-14 82.0 175 36.6
Hma1.2p1_1364F.1_g278370 Hydrangea macrophylla HOM05D002460 ORTHO05D002716 1.0e-13 80.9 208 33.7
GSVIVG01036493001 Vitis vinifera HOM05D002460 ORTHO05D002716 1.0e-13 80.9 206 35.0
Atru.chr8.721 Acer truncatum HOM05D002460 ORTHO05D002716 1.7e-13 80.1 204 35.8
VMungo1383G0633 Vigna mungo HOM05D002460 ORTHO05D002716 1.7e-13 80.1 206 34.0
Actinidia36290 Actinidia chinensis HOM05D002460 ORTHO05D002716 2.2e-13 79.7 206 32.5
Ciclev10011236m.g Citrus clementina HOM05D002460 ORTHO05D002716 2.2e-13 79.7 203 32.5
Sc10g0000410 Simmondsia chinensis HOM05D002460 ORTHO05D002716 6.5e-13 78.2 202 32.7
Glyma.08G255500 Glycine max HOM05D002460 ORTHO05D002716 8.5e-13 77.8 203 35.0
Manes.01G106400 Manihot esculenta HOM05D002460 ORTHO05D002716 8.5e-13 77.8 206 34.5
Peaxi162Scf00020g00192 Petunia axillaris HOM05D002460 ORTHO05D002716 8.5e-13 77.8 175 36.0
CSS0007406 Camellia sinensis var. sinensis HOM05D002460 ORTHO05D002716 1.1e-12 77.4 202 34.2
CSS0020831 Camellia sinensis var. sinensis HOM05D002460 ORTHO05D002716 1.1e-12 77.4 202 34.2
TPR.G3245 Trifolium pratense HOM05D002460 ORTHO05D002716 1.1e-12 77.4 196 35.7
Manes.02G063016 Manihot esculenta HOM05D002460 ORTHO05D002716 1.5e-12 77.0 206 35.0
Nitab4.5_0009717g0030 Nicotiana tabacum HOM05D002460 ORTHO05D002716 1.5e-12 77.0 204 33.8
Glyma.18G278400 Glycine max HOM05D002460 ORTHO05D002716 1.9e-12 76.6 204 33.3
Lj1g0004961 Lotus japonicus HOM05D002460 ORTHO05D002716 1.9e-12 76.6 206 34.5
Psat3g192880 Pisum sativum HOM05D002460 ORTHO05D002716 1.9e-12 76.6 201 34.8
Eucgr.J01442 Eucalyptus grandis HOM05D002460 ORTHO05D002716 2.5e-12 76.3 184 37.0
Phvul.008G022600 Phaseolus vulgaris HOM05D002460 ORTHO05D002716 2.5e-12 76.3 196 35.7
Sabra04G0074400 Salix brachista HOM05D002460 ORTHO05D002716 2.5e-12 76.3 202 33.2
MSTRG.2956 Avicennia marina HOM05D002460 ORTHO05D002716 3.2e-12 75.9 168 35.1
EL10Ac2g04392 Beta vulgaris HOM05D002460 ORTHO05D002716 3.2e-12 75.9 203 32.5
Thhalv10012887m.g Eutrema salsugineum HOM05D002460 ORTHO05D002716 3.2e-12 75.9 208 32.7
Dinv34880 Davidia involucrata HOM05D002460 ORTHO05D002716 5.5e-12 75.1 158 38.0
HanXRQChr09g0263281 Helianthus annuus HOM05D002460 ORTHO05D002716 5.5e-12 75.1 173 34.7
TAR629G3196 Trochodendron aralioides HOM05D002460 ORTHO05D002716 7.2e-12 74.7 216 31.5
PGR042G1318 Punica granatum HOM05D002460 ORTHO05D002716 9.5e-12 74.3 206 30.6
CARHR197330 Cardamine hirsuta HOM05D002460 ORTHO05D002716 1.6e-11 73.6 208 32.7
Ca_06715_v3 Cicer arietinum L. HOM05D002460 ORTHO05D002716 2.1e-11 73.2 196 35.2
PGSC0003DMG400010054 Solanum tuberosum HOM05D002460 ORTHO05D002716 3.6e-11 72.4 208 31.7
SGA_v2.0_scaffold52G19036 Striga asiatica HOM05D002460 ORTHO05D002716 4.7e-11 72.0 207 29.0
Migut.H00563 Erythranthe guttata HOM05D002460 ORTHO05D002716 6.1e-11 71.6 172 32.6
Sabra17G0090700 Salix brachista HOM05D002460 ORTHO05D002716 6.1e-11 71.6 158 33.5
Sopen02g034290 Solanum pennellii HOM05D002460 ORTHO05D002716 6.1e-11 71.6 170 35.3
A03p32960 Brassica napus HOM05D002460 ORTHO05D002716 8.0e-11 71.2 206 30.6
Cc07_g04780 Coffea canephora HOM05D002460 ORTHO05D002716 8.0e-11 71.2 204 32.8
AT5G15980 Arabidopsis thaliana HOM05D002460 ORTHO05D002716 1.0e-10 70.9 211 30.3
Medtr7g018240 Medicago truncatula HOM05D002460 ORTHO05D002716 1.0e-10 70.9 196 34.7
Potri.004G108000 Populus trichocarpa HOM05D002460 ORTHO05D002716 1.0e-10 70.9 202 32.2
Sed0014518 Sechium edule HOM05D002460 ORTHO05D002716 1.8e-10 70.1 197 32.0
CANSAT64G2241 Cannabis sativa HOM05D002460 ORTHO05D002716 2.3e-10 69.7 204 31.9
CAN.G497.28 Capsicum annuum HOM05D002460 ORTHO05D002716 2.3e-10 69.7 170 34.1
ECA232G4177 Erigeron canadensis HOM05D002460 ORTHO05D002716 2.3e-10 69.7 205 32.2
Psat4g181360 Pisum sativum HOM05D002460 ORTHO05D002716 2.3e-10 69.7 201 32.8
Phvul.007G278400 Phaseolus vulgaris HOM05D002460 ORTHO05D002716 3.0e-10 69.3 208 33.7
AL3G11810 Arabidopsis lyrata HOM05D002460 ORTHO05D002716 5.2e-10 68.6 204 30.9
BraA03t12464Z Brassica rapa HOM05D002460 ORTHO05D002716 5.2e-10 68.6 206 30.1
BolC9t58952H Brassica oleracea HOM05D002460 ORTHO05D002716 8.8e-10 67.8 211 29.9
Rhsim10G0062400 Rhododendron simsii HOM05D002460 ORTHO05D002716 8.8e-10 67.8 205 31.2
Carub.0003s0159 Capsella rubella HOM05D002460 ORTHO05D002716 1.2e-09 67.4 204 30.4
Cpa.g.sc70.3 Carica papaya HOM05D002460 ORTHO05D002716 1.2e-09 67.4 204 31.9
SalBow1G4744 Salvia bowleyana HOM05D002460 ORTHO05D002716 1.2e-09 67.4 168 32.7
SalBow1G8292 Salvia bowleyana HOM05D002460 ORTHO05D002716 1.2e-09 67.4 168 32.7
BcaC01g04555 Brassica carinata HOM05D002460 ORTHO05D002716 1.5e-09 67.0 204 29.4
Sp6g28140 Schrenkiella parvula HOM05D002460 ORTHO05D002716 1.5e-09 67.0 210 29.5
C09p61090 Brassica napus HOM05D002460 ORTHO05D002716 2.0e-09 66.6 173 31.8
AUR62009436 Chenopodium quinoa HOM05D002460 ORTHO05D002716 2.0e-09 66.6 174 32.8
DCAR_007533 Daucus carota HOM05D002460 ORTHO05D002716 2.0e-09 66.6 200 31.0
BraA10t44377Z Brassica rapa HOM05D002460 ORTHO05D002716 2.6e-09 66.2 170 31.8
Aa31LG11G13630 Aethionema arabicum HOM05D002460 ORTHO05D002716 3.4e-09 65.9 206 31.1
arahy.Tifrunner.gnm1.ann1.N66XHA Arachis hypogaea HOM05D002460 ORTHO05D002716 3.4e-09 65.9 176 33.0
BcaC01g04443 Brassica carinata HOM05D002460 ORTHO05D002716 3.4e-09 65.9 204 28.4
C03p40080 Brassica napus HOM05D002460 ORTHO05D002716 3.4e-09 65.9 204 28.4
BolC3t16274H Brassica oleracea HOM05D002460 ORTHO05D002716 3.4e-09 65.9 204 28.4
Aa31LG5G12980 Aethionema arabicum HOM05D002460 ORTHO05D002716 4.4e-09 65.5 206 30.1
ClCG11G005110 Citrullus lanatus HOM05D002460 ORTHO05D002716 4.4e-09 65.5 197 31.5
MELO3C022082.2 Cucumis melo HOM05D002460 ORTHO05D002716 4.4e-09 65.5 197 31.0
Thhalv10012992m.g Eutrema salsugineum HOM05D002460 ORTHO05D002716 4.4e-09 65.5 208 30.8
Nn1g07568 Nelumbo nucifera HOM05D002460 ORTHO05D002716 4.4e-09 65.5 205 31.7
Potri.017G108100 Populus trichocarpa HOM05D002460 ORTHO05D002716 4.4e-09 65.5 160 34.4
BcaB08g36875 Brassica carinata HOM05D002460 ORTHO05D002716 5.7e-09 65.1 204 30.4
AUR62023116 Chenopodium quinoa HOM05D002460 ORTHO05D002716 7.5e-09 64.7 172 31.4
CsaV3_5G038850 Cucumis sativus L. HOM05D002460 ORTHO05D002716 9.8e-09 64.3 197 30.5
AT3G02490 Arabidopsis thaliana HOM05D002460 ORTHO05D002716 1.3e-08 63.9 161 31.7
Sp3g01530 Schrenkiella parvula HOM05D002460 ORTHO05D002716 1.3e-08 63.9 169 32.0
BcaC04g18918 Brassica carinata HOM05D002460 ORTHO05D002716 1.7e-08 63.5 173 30.6
Lalb_Chr17g0336691 Lupinus albus HOM05D002460 ORTHO05D002716 1.7e-08 63.5 206 31.1
Sed0024220 Sechium edule HOM05D002460 ORTHO05D002716 1.7e-08 63.5 188 32.4
A10p23090 Brassica napus HOM05D002460 ORTHO05D002716 4.9e-08 62.0 160 30.6
Dinv33893 Davidia involucrata HOM05D002460 ORTHO05D002716 4.9e-08 62.0 117 35.9
AL6G26850 Arabidopsis lyrata HOM05D002460 ORTHO05D002716 8.3e-08 61.2 159 32.7
arahy.Tifrunner.gnm1.ann1.QRUK19 Arachis hypogaea HOM05D002460 ORTHO05D002716 8.3e-08 61.2 176 31.2
Carub.0006s1417 Capsella rubella HOM05D002460 ORTHO05D002716 1.1e-07 60.8 159 32.1
unitig_578.g16178 Utricularia gibba HOM05D002460 ORTHO05D002716 3.1e-07 59.3 161 34.2
CARHR076470 Cardamine hirsuta HOM05D002460 ORTHO05D002716 5.4e-07 58.5 208 28.8
MBI09_g04150_MAGBIO Magnolia biondii HOM05D002460 ORTHO05D002716 9.2e-07 57.8 79 44.3


User provided reference genes

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