Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.7e-186 655.2 336 100.0
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 1.5e-184 649.4 336 98.8
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.0e-177 626.7 336 95.2
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.9e-176 622.5 337 95.8
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 7.3e-176 620.5 336 94.9
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 2.8e-159 565.5 342 87.4
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.8e-145 519.6 344 82.6
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 1.5e-141 506.5 341 77.1
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 7.7e-141 504.2 341 78.0
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 3.3e-136 488.8 341 73.9
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 4.4e-136 488.4 341 73.6
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 6.3e-135 484.6 252 95.6
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 1.4e-131 473.4 337 74.8
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 2.1e-130 469.5 334 71.9
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 4.7e-130 468.4 340 72.1
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 1.8e-129 466.5 338 72.2
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 1.8e-129 466.5 337 71.5
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 2.0e-128 463.0 350 71.1
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 4.4e-128 461.8 343 70.6
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 1.3e-127 460.3 335 71.6
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 2.8e-127 459.1 335 71.3
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 3.7e-127 458.8 275 81.5
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 4.1e-126 455.3 342 69.6
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 2.0e-125 453.0 336 71.1
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 2.0e-125 453.0 339 71.1
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 2.6e-125 452.6 326 71.5
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 2.6e-125 452.6 336 69.9
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 2.6e-125 452.6 340 70.0
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 5.9e-125 451.4 337 69.7
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 1.0e-124 450.7 332 71.4
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.3e-124 450.3 337 70.6
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.7e-124 449.9 337 69.4
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 1.7e-124 449.9 337 70.9
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 2.2e-124 449.5 346 69.4
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 2.9e-124 449.1 327 72.2
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 5.0e-124 448.4 336 70.8
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 5.0e-124 448.4 338 68.6
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 6.5e-124 448.0 304 74.7
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 6.5e-124 448.0 339 69.0
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 8.5e-124 447.6 337 68.5
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 1.9e-123 446.4 335 69.9
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 3.2e-123 445.7 312 73.1
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 4.2e-123 445.3 333 68.8
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.1e-122 443.0 317 72.6
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 2.1e-122 443.0 338 67.8
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 2.7e-122 442.6 339 69.3
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 3.6e-122 442.2 339 68.1
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 1.4e-121 440.3 344 68.3
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.8e-121 439.9 336 67.9
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 1.8e-121 439.9 328 69.8
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 1.8e-121 439.9 343 67.6
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 2.3e-121 439.5 329 69.6
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 3.0e-121 439.1 308 72.7
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 3.0e-121 439.1 335 69.9
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 3.0e-121 439.1 344 68.0
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 3.0e-121 439.1 339 67.6
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 4.0e-121 438.7 320 71.2
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 6.7e-121 438.0 354 69.5
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 6.7e-121 438.0 336 68.5
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 3.3e-120 435.6 337 69.7
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 4.4e-120 435.3 321 70.1
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 5.7e-120 434.9 337 66.8
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 1.3e-119 433.7 340 66.5
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 4.8e-119 431.8 335 66.6
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 4.8e-119 431.8 339 68.1
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 6.3e-119 431.4 339 68.4
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 6.3e-119 431.4 334 68.6
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 1.1e-118 430.6 337 67.7
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 1.1e-118 430.6 336 67.0
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 4.1e-118 428.7 333 67.3
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 7.0e-118 427.9 334 67.4
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 9.1e-118 427.6 389 60.4
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 2.0e-117 426.4 333 67.6
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 5.9e-117 424.9 250 80.0
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 7.7e-117 424.5 325 68.6
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 7.7e-117 424.5 339 67.0
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 1.3e-116 423.7 252 80.6
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 1.3e-116 423.7 250 81.6
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 2.2e-116 422.9 333 66.7
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.1e-115 420.6 250 79.2
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 1.1e-115 420.6 343 65.0
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 2.5e-115 419.5 336 65.8
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 7.2e-115 417.9 336 66.1
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 1.2e-114 417.2 340 65.0
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 1.2e-114 417.2 340 65.0
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 1.6e-114 416.8 335 65.7
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 2.1e-114 416.4 337 64.7
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 6.1e-114 414.8 333 64.9
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 8.0e-114 414.5 337 64.4
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 1.8e-113 413.3 334 67.1
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 5.2e-113 411.8 255 76.9
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 1.2e-112 410.6 333 67.6
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 2.6e-112 409.5 413 55.4
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 1.7e-111 406.8 334 64.1
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 2.2e-111 406.4 335 64.2
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 3.7e-111 405.6 291 69.8
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 4.8e-111 405.2 303 70.0
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 7.0e-110 401.4 326 63.8
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 3.5e-109 399.1 253 75.5
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 4.5e-109 398.7 333 63.4
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 2.3e-108 396.4 252 75.4
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 4.2e-107 392.1 302 68.2
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 7.2e-107 391.3 333 62.2
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 3.0e-105 386.0 319 62.1
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 4.9e-103 378.6 251 71.7
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 1.6e-101 373.6 301 64.8
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 1.8e-97 360.1 272 64.3
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 4.4e-96 355.5 340 57.4
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 9.8e-88 327.8 334 56.6
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 1.3e-87 327.4 279 57.3
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 3.5e-85 319.3 244 67.6
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 6.4e-79 298.5 337 53.4
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 1.5e-75 287.3 335 52.8
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 4.4e-64 249.2 217 62.2
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.5e-61 239.6 209 64.6
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 2.3e-60 236.9 272 47.1
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 1.9e-59 233.8 238 48.7
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 5.6e-59 232.3 209 63.6
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 5.6e-59 232.3 150 73.3
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 3.6e-58 229.6 273 44.3
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 5.8e-56 222.2 209 59.3
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 1.3e-55 221.1 209 61.2
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 3.8e-55 219.5 260 44.6
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.2e-54 216.5 127 82.7
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.2e-54 216.5 127 82.7
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 3.3e-51 206.5 266 42.1
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 5.6e-51 205.7 126 79.4
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 1.6e-50 204.1 170 62.9
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 2.9e-47 193.4 109 81.7
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 2.9e-47 193.4 255 40.4
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 4.0e-41 172.9 248 39.5
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 6.1e-37 159.1 100 75.0
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 9.7e-35 151.8 91 82.4
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 3.8e-31 139.8 134 61.9
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 2.3e-28 130.6 215 34.0
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 8.8e-28 128.6 115 67.0
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 4.8e-26 122.9 65 87.7
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 1.1e-25 121.7 104 62.5
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 1.8e-25 120.9 65 86.2
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 4.1e-25 119.8 65 86.2
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 9.4e-22 108.6 107 57.9
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 9.4e-22 108.6 107 57.9
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 9.4e-22 108.6 107 57.9
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 1.8e-20 104.4 72 66.7
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 2.4e-17 94.0 154 37.0
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 2.0e-16 90.9 50 82.0
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 2.0e-16 90.9 52 80.8
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 1.0e-15 88.6 91 62.6
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 1.7e-15 87.8 47 83.0
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 5.5e-14 82.8 47 80.9
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 2.6e-11 73.9 53 66.0
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 3.3e-11 73.6 160 35.0
MD17G1019500 Malus domestica HOM05D004896 ORTHO05D246134 3.8e-07 60.1 82 57.3


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