Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 1.4e-41 172.9 119 100.0
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.4e-41 172.9 119 100.0
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.7e-24 115.5 59 96.6
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.5e-24 115.2 112 60.7
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 4.6e-24 114.8 59 96.6
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 1.0e-23 113.6 59 93.2
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 2.5e-22 109.0 59 88.1
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 4.3e-22 108.2 59 88.1
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 4.3e-22 108.2 59 86.4
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 7.4e-22 107.5 59 84.7
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 9.7e-22 107.1 54 98.1
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 4.8e-21 104.8 59 86.4
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 4.8e-21 104.8 59 86.4
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 8.2e-21 104.0 59 86.4
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 8.2e-21 104.0 59 86.4
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 8.2e-21 104.0 59 86.4
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 1.1e-20 103.6 59 84.7
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 1.1e-20 103.6 59 84.7
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 1.4e-20 103.2 59 86.4
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 1.8e-20 102.8 59 84.7
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 1.8e-20 102.8 59 84.7
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 1.8e-20 102.8 59 81.4
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 1.8e-20 102.8 59 84.7
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 1.8e-20 102.8 59 84.7
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 2.4e-20 102.4 59 86.4
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.4e-20 102.4 53 96.2
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 2.4e-20 102.4 53 96.2
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 3.1e-20 102.1 59 83.1
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 3.1e-20 102.1 59 83.1
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 4.1e-20 101.7 59 84.7
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 4.1e-20 101.7 59 84.7
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 5.3e-20 101.3 59 83.1
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 5.3e-20 101.3 59 83.1
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 6.9e-20 100.9 59 83.1
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 6.9e-20 100.9 59 83.1
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 9.0e-20 100.5 59 84.7
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 9.0e-20 100.5 59 81.4
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 9.0e-20 100.5 59 83.1
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.5e-19 99.8 59 81.4
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.5e-19 99.8 59 81.4
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 1.5e-19 99.8 59 79.7
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 1.5e-19 99.8 59 81.4
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 1.5e-19 99.8 59 83.1
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 1.5e-19 99.8 59 81.4
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 2.0e-19 99.4 59 79.7
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 2.6e-19 99.0 59 79.7
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 2.6e-19 99.0 59 79.7
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 3.4e-19 98.6 59 79.7
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 3.4e-19 98.6 58 82.8
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 3.4e-19 98.6 59 81.4
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 5.9e-19 97.8 59 81.4
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 5.9e-19 97.8 59 79.7
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 5.9e-19 97.8 59 78.0
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 7.7e-19 97.4 59 78.0
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 7.7e-19 97.4 59 79.7
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 7.7e-19 97.4 59 79.7
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 1.0e-18 97.1 59 76.3
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 1.0e-18 97.1 59 79.7
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 1.3e-18 96.7 59 79.7
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.7e-18 96.3 59 81.4
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.7e-18 96.3 59 81.4
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 2.2e-18 95.9 59 76.3
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 2.9e-18 95.5 58 77.6
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 2.9e-18 95.5 59 79.7
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 3.8e-18 95.1 59 78.0
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 3.8e-18 95.1 59 78.0
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 3.8e-18 95.1 59 78.0
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 3.8e-18 95.1 59 78.0
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 5.0e-18 94.7 59 78.0
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 6.5e-18 94.4 59 78.0
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 6.5e-18 94.4 59 78.0
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 6.5e-18 94.4 59 78.0
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 6.5e-18 94.4 59 78.0
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 6.5e-18 94.4 59 78.0
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 1.1e-17 93.6 59 78.0
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 1.1e-17 93.6 59 78.0
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 1.4e-17 93.2 59 78.0
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 1.4e-17 93.2 59 76.3
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 1.9e-17 92.8 59 76.3
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.5e-17 92.4 59 76.3
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 2.5e-17 92.4 48 95.8
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 2.5e-17 92.4 59 76.3
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 3.2e-17 92.0 59 76.3
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 3.2e-17 92.0 59 74.6
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 4.2e-17 91.7 59 78.0
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 5.5e-17 91.3 59 74.6
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 7.2e-17 90.9 59 76.3
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 9.4e-17 90.5 59 74.6
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 9.4e-17 90.5 59 74.6
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 9.4e-17 90.5 59 72.9
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 1.6e-16 89.7 59 74.6
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 2.1e-16 89.4 59 72.9
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 4.6e-16 88.2 59 71.2
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 4.6e-16 88.2 59 71.2
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 4.6e-16 88.2 59 72.9
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 6.1e-16 87.8 55 74.5
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 7.9e-16 87.4 59 69.5
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 1.4e-15 86.7 57 73.7
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 1.4e-15 86.7 57 71.9
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 3.0e-15 85.5 55 72.7
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 3.0e-15 85.5 55 72.7
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 3.0e-15 85.5 57 71.9
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 3.0e-15 85.5 57 71.9
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 3.0e-15 85.5 59 67.8
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 3.0e-15 85.5 55 72.7
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 3.9e-15 85.1 57 70.2
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 5.1e-15 84.7 59 66.1
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 6.7e-15 84.3 55 72.7
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 6.7e-15 84.3 55 72.7
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 8.8e-15 84.0 59 69.5
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 2.5e-14 82.4 59 69.5
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 5.7e-14 81.3 59 66.1
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 9.7e-14 80.5 59 61.0
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 2.2e-13 79.3 59 66.1
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 4.8e-13 78.2 59 66.1
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 2.4e-12 75.9 41 87.8
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 3.4e-11 72.0 43 81.4
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 7.7e-11 70.9 41 80.5
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 7.7e-11 70.9 41 80.5
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 1.3e-10 70.1 41 82.9
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 1.7e-10 69.7 41 82.9
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 1.1e-09 67.0 59 54.2
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 1.9e-09 66.2 41 75.6
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 4.2e-09 65.1 61 62.3
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 1.6e-08 63.2 56 48.2
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 6.1e-08 61.2 59 45.8
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 1.1e-06 57.0 59 45.8
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 4.4e-06 55.1 56 48.2


User provided reference genes

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