Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G3976 Fragaria x ananassa HOM05D005017 ORTHO05D006044 3.7e-127 458.4 259 100.0
FvH4_6g32940 Fragaria vesca HOM05D005017 ORTHO05D006044 2.0e-120 436.0 259 96.1
FAN09G3568 Fragaria x ananassa HOM05D005017 ORTHO05D006044 6.4e-119 431.0 259 95.4
RcHm_v2.0_Chr2g0142451 Rosa chinensis HOM05D005017 ORTHO05D006044 7.3e-115 417.5 259 93.1
FAN05G4929 Fragaria x ananassa HOM05D005017 ORTHO05D006044 4.7e-106 388.3 334 72.2
Prupe.3G052700 Prunus persica HOM05D005017 ORTHO05D006044 4.7e-106 388.3 259 84.2
MD09G1196300 Malus domestica HOM05D005017 ORTHO05D006044 5.2e-105 384.8 259 83.8
MD17G1177100 Malus domestica HOM05D005017 ORTHO05D006044 5.2e-105 384.8 259 84.6
ClCG09G000540 Citrullus lanatus HOM05D005017 ORTHO05D006044 6.2e-98 361.3 255 79.2
Sed0003007 Sechium edule HOM05D005017 ORTHO05D006044 1.2e-96 357.1 255 80.4
MELO3C024403.2 Cucumis melo HOM05D005017 ORTHO05D006044 3.4e-96 355.5 256 79.3
Atru.chr1.3634 Acer truncatum HOM05D005017 ORTHO05D006044 7.6e-96 354.4 253 81.4
CsaV3_7G034910 Cucumis sativus L. HOM05D005017 ORTHO05D006044 9.9e-96 354.0 256 78.9
Duzib235G0510 Durio zibethinus HOM05D005017 ORTHO05D006044 1.7e-95 353.2 257 77.4
Thecc.06G107700 Theobroma cacao HOM05D005017 ORTHO05D006044 6.4e-95 351.3 257 77.4
PGR102G3241 Punica granatum HOM05D005017 ORTHO05D006044 3.2e-94 349.0 257 77.0
Gohir.A02G116100 Gossypium hirsutum HOM05D005017 ORTHO05D006044 4.2e-94 348.6 257 77.4
Dinv30400 Davidia involucrata HOM05D005017 ORTHO05D006044 7.1e-94 347.8 254 76.4
COL.COLO4_30606 Corchorus olitorius HOM05D005017 ORTHO05D006044 3.5e-93 345.5 256 75.4
Ciclev10026315m.g Citrus clementina HOM05D005017 ORTHO05D006044 4.6e-93 345.1 258 76.7
Potri.001G199500 Populus trichocarpa HOM05D005017 ORTHO05D006044 1.0e-92 344.0 257 73.5
Manes.04G137400 Manihot esculenta HOM05D005017 ORTHO05D006044 3.9e-92 342.0 256 76.2
Ah.01g016970 Amaranthus hybridus HOM05D005017 ORTHO05D006044 5.1e-92 341.7 259 75.3
CiPaw.01G227300 Carya illinoinensis HOM05D005017 ORTHO05D006044 5.1e-92 341.7 256 75.4
Gohir.D03G057100 Gossypium hirsutum HOM05D005017 ORTHO05D006044 6.6e-92 341.3 252 77.0
SGA_v2.0_scaffold71G23756 Striga asiatica HOM05D005017 ORTHO05D006044 6.6e-92 341.3 256 73.4
Potri.001G193700 Populus trichocarpa HOM05D005017 ORTHO05D006044 8.7e-92 340.9 257 75.5
Gorai.003G060200 Gossypium raimondii HOM05D005017 ORTHO05D006044 1.5e-91 340.1 252 76.6
TAR624G0026 Trochodendron aralioides HOM05D005017 ORTHO05D006044 1.9e-91 339.7 256 74.6
Nn8g38928 Nelumbo nucifera HOM05D005017 ORTHO05D006044 2.5e-91 339.3 255 74.9
CANSAT56G3588 Cannabis sativa HOM05D005017 ORTHO05D006044 2.8e-90 335.9 257 73.5
Dinv37934 Davidia involucrata HOM05D005017 ORTHO05D006044 2.8e-90 335.9 257 75.5
MSTRG.22609 Avicennia marina HOM05D005017 ORTHO05D006044 6.2e-90 334.7 255 72.9
Atru.chr1.3630 Acer truncatum HOM05D005017 ORTHO05D006044 8.1e-90 334.3 238 81.1
Eucgr.F03103 Eucalyptus grandis HOM05D005017 ORTHO05D006044 1.4e-89 333.6 255 78.0
Actinidia21740 Actinidia chinensis HOM05D005017 ORTHO05D006044 6.9e-89 331.3 253 71.5
CSS0030454 Camellia sinensis var. sinensis HOM05D005017 ORTHO05D006044 1.2e-88 330.5 251 72.5
TWI79G0337 Tripterygium wilfordii HOM05D005017 ORTHO05D006044 3.4e-88 328.9 250 76.8
Rhsim08G0231100 Rhododendron simsii HOM05D005017 ORTHO05D006044 4.4e-88 328.6 266 69.5
GSVIVG01016892001 Vitis vinifera HOM05D005017 ORTHO05D006044 4.4e-88 328.6 247 77.3
Cpa.g.sc663.1 Carica papaya HOM05D005017 ORTHO05D006044 5.4e-86 321.6 255 71.4
EL10Ac9g21132 Beta vulgaris HOM05D005017 ORTHO05D006044 1.2e-85 320.5 245 76.3
Nitab4.5_0004848g0030 Nicotiana tabacum HOM05D005017 ORTHO05D006044 2.1e-85 319.7 252 73.0
Migut.I00995 Erythranthe guttata HOM05D005017 ORTHO05D006044 2.7e-85 319.3 242 69.4
MBI01_g27633_MAGBIO Magnolia biondii HOM05D005017 ORTHO05D006044 7.8e-85 317.8 255 68.2
Psat4g194480 Pisum sativum HOM05D005017 ORTHO05D006044 7.8e-85 317.8 259 71.0
Cc04_g02270 Coffea canephora HOM05D005017 ORTHO05D006044 1.0e-84 317.4 247 75.3
VMungo0331G1330 Vigna mungo HOM05D005017 ORTHO05D006044 1.0e-84 317.4 258 69.8
AL1G59670 Arabidopsis lyrata HOM05D005017 ORTHO05D006044 2.3e-84 316.2 256 73.0
Ca_23294_v3 Cicer arietinum L. HOM05D005017 ORTHO05D006044 3.0e-84 315.8 257 68.9
Glyma.08G196300 Glycine max HOM05D005017 ORTHO05D006044 3.9e-84 315.5 258 72.9
Lalb_Chr04g0263111 Lupinus albus HOM05D005017 ORTHO05D006044 3.9e-84 315.5 254 73.2
Lsat_1_v5_gn_1_36441 Lactuca sativa HOM05D005017 ORTHO05D006044 5.1e-84 315.1 250 73.6
ECA247G1989 Erigeron canadensis HOM05D005017 ORTHO05D006044 8.7e-84 314.3 257 70.0
Glyma.07G012600 Glycine max HOM05D005017 ORTHO05D006044 1.1e-83 313.9 258 69.0
Aqoxy2G03852 Aquilegia oxysepala HOM05D005017 ORTHO05D006044 1.9e-83 313.2 255 72.2
Phvul.010G142100 Phaseolus vulgaris HOM05D005017 ORTHO05D006044 2.5e-83 312.8 253 68.8
AT1G51730 Arabidopsis thaliana HOM05D005017 ORTHO05D006044 3.3e-83 312.4 255 71.0
Lj3g0014772 Lotus japonicus HOM05D005017 ORTHO05D006044 4.3e-83 312.0 259 72.2
Lalb_Chr01g0013321 Lupinus albus HOM05D005017 ORTHO05D006044 4.3e-83 312.0 251 72.5
Nitab4.5_0006071g0010 Nicotiana tabacum HOM05D005017 ORTHO05D006044 4.3e-83 312.0 247 72.5
Aa31LG10G3080 Aethionema arabicum HOM05D005017 ORTHO05D006044 7.3e-83 311.2 256 71.9
HanXRQChr04g0095781 Helianthus annuus HOM05D005017 ORTHO05D006044 7.3e-83 311.2 256 71.1
Sp1g38370 Schrenkiella parvula HOM05D005017 ORTHO05D006044 1.6e-82 310.1 255 70.6
Sopen03g040120 Solanum pennellii HOM05D005017 ORTHO05D006044 1.6e-82 310.1 252 70.6
AUR62038338 Chenopodium quinoa HOM05D005017 ORTHO05D006044 4.8e-82 308.5 245 73.9
TPR.G8766 Trifolium pratense HOM05D005017 ORTHO05D006044 4.8e-82 308.5 258 69.8
PGSC0003DMG401002511 Solanum tuberosum HOM05D005017 ORTHO05D006044 6.2e-82 308.1 252 70.2
THA.LOC104817935 Tarenaya hassleriana HOM05D005017 ORTHO05D006044 6.2e-82 308.1 258 71.7
Thhalv10011475m.g Eutrema salsugineum HOM05D005017 ORTHO05D006044 8.1e-82 307.8 255 70.6
AUR62023908 Chenopodium quinoa HOM05D005017 ORTHO05D006044 1.4e-81 307.0 245 73.5
QL05p015800 Quercus lobata HOM05D005017 ORTHO05D006044 1.8e-81 306.6 349 54.4
Medtr8g015590 Medicago truncatula HOM05D005017 ORTHO05D006044 6.9e-81 304.7 259 69.9
Sc12g0009900 Simmondsia chinensis HOM05D005017 ORTHO05D006044 1.5e-80 303.5 216 70.8
CAN.G1668.3 Capsicum annuum HOM05D005017 ORTHO05D006044 3.4e-80 302.4 252 69.4
C03p90280 Brassica napus HOM05D005017 ORTHO05D006044 4.5e-80 302.0 251 71.7
TWI31G0253 Tripterygium wilfordii HOM05D005017 ORTHO05D006044 4.5e-80 302.0 250 70.8
A08p02530 Brassica napus HOM05D005017 ORTHO05D006044 1.3e-79 300.4 251 72.1
Hma1.2p1_0679F.1_g202280 Hydrangea macrophylla HOM05D005017 ORTHO05D006044 1.3e-79 300.4 253 70.8
ATR0789G068 Amborella trichopoda HOM05D005017 ORTHO05D006044 2.9e-79 299.3 244 65.6
Solyc03g121310.2 Solanum lycopersicum HOM05D005017 ORTHO05D006044 1.4e-78 297.0 258 67.4
Ah.01g004460 Amaranthus hybridus HOM05D005017 ORTHO05D006044 2.4e-78 296.2 298 63.8
HPP92_023230 Vanilla planifolia HOM05D005017 ORTHO05D006044 2.4e-78 296.2 249 67.5
Carub.0001s4060 Capsella rubella HOM05D005017 ORTHO05D006044 9.3e-78 294.3 247 70.9
Cfa003607 Carpinus fangiana HOM05D005017 ORTHO05D006044 2.7e-77 292.7 232 68.5
CARHR041890 Cardamine hirsuta HOM05D005017 ORTHO05D006044 3.5e-77 292.4 247 71.3
DCAR_026373 Daucus carota HOM05D005017 ORTHO05D006044 4.6e-77 292.0 273 63.7
Peaxi162Scf00038g01246 Petunia axillaris HOM05D005017 ORTHO05D006044 4.6e-77 292.0 203 71.4
Lsat_1_v5_gn_5_133981 Lactuca sativa HOM05D005017 ORTHO05D006044 1.3e-76 290.4 252 68.7
Os01g0558300 Oryza sativa ssp. japonica HOM05D005017 ORTHO05D006044 2.3e-76 289.7 250 66.0
A05p19400 Brassica napus HOM05D005017 ORTHO05D006044 3.0e-76 289.3 241 71.0
BraA08t32293Z Brassica rapa HOM05D005017 ORTHO05D006044 6.7e-76 288.1 242 71.5
BolC6t36489H Brassica oleracea HOM05D005017 ORTHO05D006044 2.5e-75 286.2 242 70.2
BolC3t21350H Brassica oleracea HOM05D005017 ORTHO05D006044 5.6e-75 285.0 251 70.1
BcaC01g01293 Brassica carinata HOM05D005017 ORTHO05D006044 7.4e-75 284.6 265 66.0
Zm00001eb162290 Zea mays HOM05D005017 ORTHO05D006044 9.6e-75 284.3 250 65.6
Lj5C49T18 Lonicera japonica HOM05D005017 ORTHO05D006044 2.1e-74 283.1 194 72.7
HanXRQChr12g0360701 Helianthus annuus HOM05D005017 ORTHO05D006044 6.2e-74 281.6 250 65.2
BraA05t20844Z Brassica rapa HOM05D005017 ORTHO05D006044 1.4e-73 280.4 248 68.5
SEGI_04320 Sequoiadendron giganteum HOM05D005017 ORTHO05D006044 2.4e-73 279.6 251 66.5
CDE05G2485 Ceratophyllum demersum HOM05D005017 ORTHO05D006044 4.9e-71 271.9 242 64.5
BcaC08g43934 Brassica carinata HOM05D005017 ORTHO05D006044 6.4e-71 271.6 250 67.2
vmacro18822 Vaccinium macrocarpon HOM05D005017 ORTHO05D006044 6.4e-71 271.6 278 61.2
C06p13290 Brassica napus HOM05D005017 ORTHO05D006044 1.4e-70 270.4 248 67.3
PSO210G2569 Papaver somniferum HOM05D005017 ORTHO05D006044 1.9e-70 270.0 256 60.5
arahy.Tifrunner.gnm1.ann1.TCAK26 Arachis hypogaea HOM05D005017 ORTHO05D006044 9.3e-70 267.7 257 65.0
arahy.Tifrunner.gnm1.ann1.ZK2LT4 Arachis hypogaea HOM05D005017 ORTHO05D006044 7.9e-69 264.6 257 64.2
Mapoly0076s0035 Marchantia polymorpha HOM05D005017 ORTHO05D006044 3.0e-68 262.7 213 61.5
Sabra01G0156200 Salix brachista HOM05D000200 ORTHO05D000262 9.6e-67 257.7 291 55.7
Haze_15918 Corylus avellana HOM05D005017 ORTHO05D006044 1.1e-65 254.2 168 77.4
Pp3c27_5930 Physcomitrium patens HOM05D005017 ORTHO05D006044 1.5e-64 250.4 198 62.1
SGA_v2.0_scaffold45G16987 Striga asiatica HOM05D005017 ORTHO05D006044 1.5e-64 250.4 247 62.8
unitig_0.g2868 Utricularia gibba HOM05D005017 ORTHO05D006044 2.6e-64 249.6 253 58.1
SalBow6G5092 Salvia bowleyana HOM05D005017 ORTHO05D006044 1.3e-63 247.3 251 61.0
Pp3c5_13990 Physcomitrium patens HOM05D005017 ORTHO05D006044 3.0e-60 236.1 250 57.2
ECA234G0069 Erigeron canadensis HOM05D005017 ORTHO05D006044 1.1e-59 234.2 253 57.7
Lj9A517T55 Lonicera japonica HOM05D005017 ORTHO05D006044 7.7e-56 221.5 218 57.3
Actinidia32130 Actinidia chinensis HOM05D005017 ORTHO05D006044 3.8e-55 219.2 244 54.5
Zm00001eb356680 Zea mays HOM05D005017 ORTHO05D006044 4.2e-54 215.7 250 54.4
Gohir.A05G133633 Gossypium hirsutum HOM05D005017 ORTHO05D006044 1.2e-53 214.2 244 53.3
FAN02G2875 Fragaria x ananassa HOM05D005017 ORTHO05D006044 3.6e-53 212.6 344 50.9
SMO300G0020 Selaginella moellendorffii HOM05D005017 ORTHO05D006044 3.6e-53 212.6 244 57.4
CSS0006284 Camellia sinensis var. sinensis HOM05D005017 ORTHO05D006044 1.1e-51 207.6 149 69.1
CBR_g78883 Chara braunii HOM05D005017 ORTHO05D006044 4.8e-50 202.2 233 48.5
Oeu052817.1 Olea europaea HOM05D005017 ORTHO05D006044 7.2e-46 188.3 137 68.6
Gorai.009G139400 Gossypium raimondii HOM05D005017 ORTHO05D006044 1.0e-44 184.5 130 71.5
BcaB07g33629 Brassica carinata HOM05D005017 ORTHO05D006044 2.2e-42 176.8 170 65.3
PSO170G1437 Papaver somniferum HOM05D005017 ORTHO05D006044 5.3e-41 172.2 146 58.2
Hma1.2p1_0679F.1_g202290 Hydrangea macrophylla HOM05D005017 ORTHO05D006044 7.0e-41 171.8 149 72.5
Duzib192G1032 Durio zibethinus HOM05D005017 ORTHO05D006044 1.5e-40 170.6 257 44.0
Gohir.D05G135550 Gossypium hirsutum HOM05D005017 ORTHO05D006044 3.2e-38 162.9 133 64.7
BcaB02g11274 Brassica carinata HOM05D005017 ORTHO05D006044 5.2e-36 155.6 194 49.5
A06p02280 Brassica napus HOM05D005017 ORTHO05D006044 1.6e-32 144.1 200 56.5
Cre03.g201776 Chlamydomonas reinhardtii HOM05D005017 ORTHO05D006044 3.5e-32 142.9 207 40.1
MCO07G323 Micromonas commoda HOM05D005017 ORTHO05D006044 1.2e-29 134.4 230 37.8
Oeu052818.1 Olea europaea HOM05D005017 ORTHO05D006044 2.7e-29 133.3 117 80.3
PRCOL_00005001 Prasinoderma coloniale HOM05D005017 ORTHO05D006044 4.7e-29 132.5 235 38.7
Aa31csc1849G10 Aethionema arabicum HOM05D005017 ORTHO05D006044 2.2e-26 123.6 111 75.7
Oeu026734.1 Olea europaea HOM05D005017 ORTHO05D006044 1.6e-24 117.5 72 79.2
PSO782G0965 Papaver somniferum HOM05D005017 ORTHO05D006044 3.2e-22 109.8 92 53.3
Aa31LG1G17240 Aethionema arabicum HOM05D005017 ORTHO05D006044 3.6e-21 106.3 63 82.5
PSO135G0227 Papaver somniferum HOM05D005017 ORTHO05D006044 3.7e-18 96.3 79 53.2
PSO675G1433 Papaver somniferum HOM05D005017 ORTHO05D006044 9.1e-17 91.7 79 51.9
CSS0004179 Camellia sinensis var. sinensis HOM05D005017 ORTHO05D006044 9.5e-14 81.6 79 70.9
Cfa022882 Carpinus fangiana HOM05D005017 ORTHO05D006044 4.1e-09 66.2 157 35.7
Pp3c6_13820 Physcomitrium patens HOM05D005017 ORTHO05D006044 1.2e-08 64.7 185 28.6
Hund07663 Selenicereus undatus HOM05D001165 ORTHO05D010360 2.0e-08 63.9 37 78.4
Mapoly0088s0047 Marchantia polymorpha HOM05D003486 ORTHO05D004600 7.3e-06 55.5 175 29.1


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