Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G3868 Fragaria x ananassa HOM05D008620 ORTHO05D011304 1.6e-247 859.0 445 100.0
SGA_v2.0_scaffold143G35776 Striga asiatica HOM05D008620 ORTHO05D011304 7.7e-56 222.2 460 38.5
FAN05G3675 Fragaria x ananassa HOM05D017251 ORTHO05D011304 1.0e-55 221.9 123 95.9
SGA_v2.0_scaffold221G42752 Striga asiatica HOM05D008620 ORTHO05D011304 2.9e-18 97.4 93 58.1
Os03g0143150 Oryza sativa ssp. japonica HOM05D008620 ORTHO05D017975 1.4e-17 95.1 321 32.4
SGA_v2.0_scaffold121G33144 Striga asiatica HOM05D008620 ORTHO05D011304 1.6e-16 91.7 86 54.7
SGA_v2.0_scaffold627G53254 Striga asiatica HOM05D008620 ORTHO05D011304 2.7e-16 90.9 86 54.7
SGA_v2.0_scaffold21G09498 Striga asiatica HOM05D008620 ORTHO05D011304 3.5e-16 90.5 261 33.3
TAR628G0251 Trochodendron aralioides HOM05D008620 ORTHO05D011304 3.5e-16 90.5 69 66.7
SGA_v2.0_scaffold121G33134 Striga asiatica HOM05D008620 ORTHO05D011304 6.6e-15 86.3 85 55.3
MBI13_g43924_MAGBIO Magnolia biondii HOM05D031592 ORTHO05D011304 1.1e-14 85.5 71 64.8
FAN15G3198 Fragaria x ananassa HOM05D017251 ORTHO05D019846 1.9e-14 84.7 119 46.2
SGA_v2.0_scaffold121G33149 Striga asiatica HOM05D008620 ORTHO05D011304 7.3e-14 82.8 81 54.3
SGA_v2.0_scaffold121G33146 Striga asiatica HOM05D008620 ORTHO05D011304 9.5e-14 82.4 81 54.3
FAN20G0165 Fragaria x ananassa HOM05D017251 ORTHO05D019846 2.1e-13 81.3 184 38.0
SGA_v2.0_scaffold49G18104 Striga asiatica HOM05D008620 ORTHO05D011304 2.1e-13 81.3 86 48.8
Zm00001eb082800 Zea mays HOM05D008620 ORTHO05D017975 2.3e-12 77.8 270 31.9
FAN23G0406 Fragaria x ananassa HOM05D008620 ORTHO05D017975 1.3e-10 72.0 149 37.6
MBI13_g43923_MAGBIO Magnolia biondii HOM05D031592 ORTHO05D011304 1.7e-10 71.6 53 69.8
FAN19G0360 Fragaria x ananassa HOM05D008620 ORTHO05D011304 2.2e-10 71.2 72 54.2
FAN28G0556 Fragaria x ananassa HOM05D008620 ORTHO05D011304 2.2e-10 71.2 72 54.2
MBI12_g36691_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 2.2e-10 71.2 84 50.0
Lsat_1_v5_gn_2_129941 Lactuca sativa HOM05D008620 ORTHO05D011304 1.9e-09 68.2 70 54.3
SGA_v2.0_scaffold44G16610 Striga asiatica HOM05D008620 ORTHO05D011304 1.9e-09 68.2 77 49.4
Zm00001eb325460 Zea mays HOM05D008620 ORTHO05D017975 7.1e-09 66.2 286 31.1
FAN18G1743 Fragaria x ananassa HOM05D017251 ORTHO05D019846 1.6e-08 65.1 84 50.0
FAN11G1551 Fragaria x ananassa HOM05D017251 ORTHO05D019846 3.5e-08 63.9 84 50.0
FAN12G0696 Fragaria x ananassa HOM05D000036 ORTHO05D000441 4.6e-08 63.5 84 50.0
MBI19_g32860_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 4.6e-08 63.5 71 54.9
FAN28G2901 Fragaria x ananassa HOM05D008620 ORTHO05D017975 7.8e-08 62.8 158 33.5
FAN12G1255 Fragaria x ananassa HOM05D017251 ORTHO05D019846 2.3e-07 61.2 84 48.8
QL10p055263 Quercus lobata HOM05D037091 ORTHO05D029344 3.9e-07 60.5 114 38.6
FAN20G0510 Fragaria x ananassa HOM05D008620 ORTHO05D044731 6.6e-07 59.7 118 34.7
MBI18_g21804_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 6.6e-07 59.7 83 45.8
FAN26G1939 Fragaria x ananassa HOM05D008620 ORTHO05D017975 8.6e-07 59.3 117 35.9
FAN19G2694 Fragaria x ananassa HOM05D028908 ORTHO05D025601 5.6e-06 56.6 76 47.4
FAN26G1909 Fragaria x ananassa HOM05D028908 ORTHO05D025601 5.6e-06 56.6 76 47.4
ATR0855G001 Amborella trichopoda HOM05D008620 ORTHO05D011304 7.3e-06 56.2 68 50.0


User provided reference genes

Program Settings