Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 8.6e-135 483.8 269 100.0
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 1.5e-126 456.4 257 99.2
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 3.5e-120 435.3 257 94.2
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 4.9e-106 388.3 266 86.1
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 1.3e-82 310.5 272 71.0
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 2.5e-81 306.2 271 71.6
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 6.5e-58 228.4 285 56.5
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 2.5e-57 226.5 280 49.3
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 2.5e-57 226.5 260 50.8
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.6e-56 223.8 281 51.6
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 6.1e-56 221.9 272 49.6
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 8.8e-55 218.0 284 48.2
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 2.6e-54 216.5 295 51.5
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 3.3e-54 216.1 287 48.1
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 3.3e-54 216.1 269 54.3
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 1.7e-53 213.8 279 49.1
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 1.7e-53 213.8 280 47.9
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 1.7e-53 213.8 292 45.5
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 1.4e-52 210.7 298 48.7
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 2.4e-52 209.9 281 48.8
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.4e-52 209.9 278 48.2
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 2.4e-52 209.9 281 46.6
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 4.1e-52 209.1 281 49.5
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 5.3e-52 208.8 279 47.0
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 1.2e-51 207.6 279 46.6
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 1.6e-51 207.2 303 45.5
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 1.0e-50 204.5 278 46.8
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 2.2e-50 203.4 292 44.2
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 6.5e-50 201.8 264 47.0
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 1.5e-49 200.7 276 46.7
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 1.5e-49 200.7 291 43.6
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 3.2e-49 199.5 285 44.9
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 5.5e-49 198.7 276 49.6
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 2.1e-48 196.8 289 46.0
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 2.1e-48 196.8 294 45.6
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 8.0e-48 194.9 234 50.4
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 1.0e-47 194.5 282 43.6
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 1.0e-47 194.5 294 45.2
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 1.0e-47 194.5 297 44.8
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 1.4e-47 194.1 266 45.1
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 2.3e-47 193.4 256 48.8
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 1.2e-46 191.0 284 44.7
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 1.5e-46 190.7 295 44.4
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 2.0e-46 190.3 339 40.4
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 2.6e-46 189.9 286 43.4
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 2.6e-46 189.9 281 43.4
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 2.6e-46 189.9 268 49.6
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 4.4e-46 189.1 284 43.3
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 9.7e-46 188.0 285 43.5
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 1.3e-45 187.6 289 43.9
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 2.8e-45 186.4 280 44.6
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 6.3e-45 185.3 280 44.3
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 1.4e-44 184.1 267 48.3
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 1.8e-44 183.7 291 41.9
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 1.2e-43 181.0 226 50.4
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 2.0e-43 180.3 261 46.4
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 4.5e-43 179.1 237 47.7
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 5.9e-43 178.7 266 42.9
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 5.9e-43 178.7 266 42.9
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 1.0e-42 177.9 247 44.9
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 5.0e-42 175.6 268 43.3
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 2.5e-41 173.3 260 44.2
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 2.5e-41 173.3 344 37.5
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 7.2e-41 171.8 265 44.2
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 7.2e-41 171.8 268 41.8
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 1.2e-40 171.0 261 41.8
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 2.7e-40 169.9 284 44.4
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 1.8e-39 167.2 246 46.3
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 4.0e-39 166.0 293 38.6
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 8.8e-39 164.9 267 42.7
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 3.4e-38 162.9 307 37.8
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 5.7e-38 162.2 212 49.1
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 7.5e-38 161.8 246 45.1
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 2.8e-37 159.8 354 37.0
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 8.3e-37 158.3 262 42.0
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 3.1e-36 156.4 175 50.9
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 7.0e-36 155.2 276 40.6
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 2.7e-35 153.3 233 42.9
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 2.9e-34 149.8 233 41.2
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 6.5e-34 148.7 322 36.0
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 4.7e-32 142.5 273 41.0
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 6.1e-32 142.1 183 46.4
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 8.0e-32 141.7 212 45.3
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 1.4e-31 141.0 262 37.8
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 6.8e-31 138.7 285 36.5
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 4.5e-27 125.9 233 44.6
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 8.6e-26 121.7 88 71.6
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 1.1e-25 121.3 160 44.4
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.0e-23 113.2 75 70.7
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 8.9e-23 111.7 179 45.3
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 2.9e-21 106.7 164 42.1
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 8.3e-21 105.1 77 67.5
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 1.1e-20 104.8 350 29.4
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 5.9e-19 99.0 264 33.3
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 7.8e-19 98.6 109 46.8
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 3.9e-18 96.3 254 30.3
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 1.1e-17 94.7 265 30.9
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 4.1e-12 76.3 124 42.7
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.0e-10 70.1 129 38.8
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 4.3e-09 66.2 274 24.8
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 2.1e-08 63.9 45 66.7
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 4.7e-08 62.8 64 57.8
Os12g0623400 Oryza sativa ssp. japonica HOM05D007071 ORTHO05D008677 6.2e-08 62.4 81 46.9
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 3.1e-07 60.1 133 30.1
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 6.8e-07 58.9 57 52.6
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 8.9e-07 58.5 40 72.5
Mapoly0045s0075 Marchantia polymorpha HOM05D007071 ORTHO05D008677 2.0e-06 57.4 75 37.3


User provided reference genes

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