Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G3071 Fragaria x ananassa HOM05D000314 ORTHO05D000189 4.1e-51 204.5 109 100.0
FAN14G1432 Fragaria x ananassa HOM05D000314 ORTHO05D000189 5.3e-51 204.1 108 100.0
FvH4_6g48990 Fragaria vesca HOM05D000314 ORTHO05D000189 6.9e-51 203.8 108 99.1
FAN05G1502 Fragaria x ananassa HOM05D000314 ORTHO05D000189 2.3e-46 188.7 115 89.6
FAN09G0630 Fragaria x ananassa HOM05D000314 ORTHO05D000189 1.5e-45 186.0 110 92.7
RcHm_v2.0_Chr2g0168831 Rosa chinensis HOM05D000314 ORTHO05D000189 1.3e-41 172.9 111 80.2
FAN02G4352 Fragaria x ananassa HOM05D000314 ORTHO05D000189 3.6e-31 138.3 78 84.6
Prupe.3G269700 Prunus persica HOM05D000314 ORTHO05D000189 1.2e-21 106.7 119 55.5
Sc11g0007010 Simmondsia chinensis HOM05D000314 ORTHO05D000189 1.2e-21 106.7 109 54.1
Cfa007531 Carpinus fangiana HOM05D000314 ORTHO05D000189 2.6e-21 105.5 116 57.8
Haze_14557 Corylus avellana HOM05D000314 ORTHO05D000189 1.7e-20 102.8 112 58.0
Phvul.008G042000 Phaseolus vulgaris HOM05D000314 ORTHO05D000189 3.1e-19 98.6 127 47.2
MD09G1049100 Malus domestica HOM05D000314 ORTHO05D000189 4.1e-19 98.2 109 55.0
VMungo1383G0918 Vigna mungo HOM05D000314 ORTHO05D000189 4.1e-19 98.2 127 48.0
CiPaw.03G028700 Carya illinoinensis HOM05D000314 ORTHO05D000189 5.4e-19 97.8 117 49.6
Ah.10g031410 Amaranthus hybridus HOM05D000314 ORTHO05D000189 7.0e-19 97.4 122 47.5
EL10Ac2g02956 Beta vulgaris HOM05D000314 ORTHO05D000189 7.0e-19 97.4 116 50.9
MD17G1049100 Malus domestica HOM05D000314 ORTHO05D000189 7.0e-19 97.4 107 56.1
TWI34G0382 Tripterygium wilfordii HOM05D000314 ORTHO05D000189 2.0e-18 95.9 113 60.2
CANSAT64G0283 Cannabis sativa HOM05D000314 ORTHO05D000189 2.7e-18 95.5 107 55.1
CANSAT64G0890 Cannabis sativa HOM05D000314 ORTHO05D000189 2.7e-18 95.5 107 55.1
DCAR_006727 Daucus carota HOM05D000314 ORTHO05D000189 2.7e-18 95.5 108 49.1
QL02p081436 Quercus lobata HOM05D000314 ORTHO05D000189 2.7e-18 95.5 118 52.5
TWI32G0863 Tripterygium wilfordii HOM05D000314 ORTHO05D000189 5.9e-18 94.4 120 51.7
Hma1.2p1_1733F.1_g299840 Hydrangea macrophylla HOM05D000314 ORTHO05D000189 1.7e-17 92.8 108 47.2
HanXRQChr14g0449891 Helianthus annuus HOM05D000314 ORTHO05D000189 6.6e-17 90.9 108 47.2
Migut.H00907 Erythranthe guttata HOM05D000314 ORTHO05D000189 8.6e-17 90.5 113 48.7
Manes.15G174900 Manihot esculenta HOM05D000314 ORTHO05D000189 8.6e-17 90.5 117 49.6
VMungo1383G0922 Vigna mungo HOM05D000314 ORTHO05D000189 1.5e-16 89.7 128 46.1
Atru.chr8.197 Acer truncatum HOM05D000314 ORTHO05D000189 1.9e-16 89.4 112 50.0
ECA238G4510 Erigeron canadensis HOM05D000314 ORTHO05D000189 2.5e-16 89.0 113 45.1
Psat3g196440 Pisum sativum HOM05D000314 ORTHO05D000189 2.5e-16 89.0 127 50.4
TAR622G0623 Trochodendron aralioides HOM05D000314 ORTHO05D000189 2.5e-16 89.0 107 58.9
Phvul.008G042100 Phaseolus vulgaris HOM05D000314 ORTHO05D000189 3.3e-16 88.6 127 44.1
Ciclev10011708m.g Citrus clementina HOM05D000314 ORTHO05D000189 5.6e-16 87.8 119 47.9
Eucgr.J01217 Eucalyptus grandis HOM05D000314 ORTHO05D000189 9.5e-16 87.0 115 50.4
Dinv33742 Davidia involucrata HOM05D000314 ORTHO05D000189 1.2e-15 86.7 113 54.0
Medtr7g010090 Medicago truncatula HOM05D000314 ORTHO05D000189 1.2e-15 86.7 140 50.7
CARHR262320 Cardamine hirsuta HOM05D000314 ORTHO05D000189 1.6e-15 86.3 119 43.7
Lsat_1_v5_gn_2_88900 Lactuca sativa HOM05D000314 ORTHO05D000189 1.6e-15 86.3 116 45.7
Glyma.18G258500 Glycine max HOM05D000314 ORTHO05D000189 2.1e-15 85.9 129 44.2
GSVIVG01011378001 Vitis vinifera HOM05D000314 ORTHO05D000189 2.1e-15 85.9 83 59.0
THA.LOC104823941 Tarenaya hassleriana HOM05D000314 ORTHO05D000189 2.8e-15 85.5 123 43.1
Dinv06529 Davidia involucrata HOM05D000314 ORTHO05D000189 3.6e-15 85.1 110 50.0
Cc07_g03220 Coffea canephora HOM05D000314 ORTHO05D000189 8.0e-15 84.0 115 47.8
Glyma.09G239300 Glycine max HOM05D000314 ORTHO05D000189 8.0e-15 84.0 129 43.4
Thecc.04G078500 Theobroma cacao HOM05D000314 ORTHO05D000189 8.0e-15 84.0 116 49.1
AT5G39865 Arabidopsis thaliana HOM05D000314 ORTHO05D000189 1.0e-14 83.6 117 44.4
Duzib264G0035 Durio zibethinus HOM05D000314 ORTHO05D000189 1.4e-14 83.2 110 47.3
Thhalv10028210m.g Eutrema salsugineum HOM05D000314 ORTHO05D000189 1.4e-14 83.2 81 55.6
Lju41C23T7 Lonicera japonica HOM05D000314 ORTHO05D000189 1.8e-14 82.8 109 48.6
Actinidia36022 Actinidia chinensis HOM05D000314 ORTHO05D000189 2.3e-14 82.4 108 45.4
Gohir.A05G364900 Gossypium hirsutum HOM05D000314 ORTHO05D000189 2.3e-14 82.4 115 49.6
Gorai.012G055300 Gossypium raimondii HOM05D000314 ORTHO05D000189 2.3e-14 82.4 115 49.6
Gohir.D04G049900 Gossypium hirsutum HOM05D000314 ORTHO05D000189 3.0e-14 82.0 115 49.6
A04p12620 Brassica napus HOM05D000314 ORTHO05D000189 4.0e-14 81.6 117 42.7
BraA04t16919Z Brassica rapa HOM05D000314 ORTHO05D000189 4.0e-14 81.6 117 42.7
Lj1g0008622 Lotus japonicus HOM05D000314 ORTHO05D000189 4.0e-14 81.6 139 42.4
MSTRG.23950 Avicennia marina HOM05D000314 ORTHO05D000189 5.2e-14 81.3 115 48.7
MELO3C009882.2 Cucumis melo HOM05D000314 ORTHO05D000189 5.2e-14 81.3 107 48.6
Potri.017G081600 Populus trichocarpa HOM05D000314 ORTHO05D000189 5.2e-14 81.3 121 44.6
Sp7g02180 Schrenkiella parvula HOM05D000314 ORTHO05D000189 5.2e-14 81.3 81 55.6
TPR.G10373 Trifolium pratense HOM05D000314 ORTHO05D000189 5.2e-14 81.3 117 43.6
Actinidia23564 Actinidia chinensis HOM05D000314 ORTHO05D000189 6.8e-14 80.9 108 44.4
Sed0016083 Sechium edule HOM05D000314 ORTHO05D000189 6.8e-14 80.9 107 50.5
TAR374G1658 Trochodendron aralioides HOM05D000314 ORTHO05D000189 6.8e-14 80.9 110 47.3
AL7G50280 Arabidopsis lyrata HOM05D000314 ORTHO05D000189 8.9e-14 80.5 81 53.1
AUR62031608 Chenopodium quinoa HOM05D000314 ORTHO05D000189 1.2e-13 80.1 88 48.9
CsaV3_3G041570 Cucumis sativus L. HOM05D000314 ORTHO05D000189 1.2e-13 80.1 107 49.5
DCAR_011143 Daucus carota HOM05D000314 ORTHO05D000189 1.5e-13 79.7 109 45.9
AUR62034387 Chenopodium quinoa HOM05D000314 ORTHO05D000189 2.0e-13 79.3 90 47.8
Carub.0007s3586 Capsella rubella HOM05D000314 ORTHO05D000189 2.6e-13 79.0 107 45.8
ClCG10G014950 Citrullus lanatus HOM05D000314 ORTHO05D000189 2.6e-13 79.0 107 51.4
Duzib147G1228 Durio zibethinus HOM05D000314 ORTHO05D000189 2.6e-13 79.0 110 45.5
TPR.G23843 Trifolium pratense HOM05D000314 ORTHO05D000189 2.6e-13 79.0 139 44.6
arahy.Tifrunner.gnm1.ann1.G540IJ Arachis hypogaea HOM05D000314 ORTHO05D000189 3.4e-13 78.6 59 69.5
Aa31LG2G4370 Aethionema arabicum HOM05D000314 ORTHO05D000189 4.4e-13 78.2 56 66.1
Cpa.g.sc14.17 Carica papaya HOM05D000314 ORTHO05D000189 4.4e-13 78.2 56 75.0
Gohir.A09G019300 Gossypium hirsutum HOM05D000314 ORTHO05D000189 5.8e-13 77.8 117 45.3
Gohir.D09G018700 Gossypium hirsutum HOM05D000314 ORTHO05D000189 7.5e-13 77.4 115 46.1
Gorai.006G022000 Gossypium raimondii HOM05D000314 ORTHO05D000189 7.5e-13 77.4 115 46.1
BcaB06g27385 Brassica carinata HOM05D000314 ORTHO05D000189 1.3e-12 76.6 57 64.9
Sed0001624 Sechium edule HOM05D000314 ORTHO05D000189 1.3e-12 76.6 107 47.7
COL.COLO4_05130 Corchorus olitorius HOM05D000314 ORTHO05D000189 2.9e-12 75.5 56 73.2
Glyma.19G021300 Glycine max HOM05D000314 ORTHO05D000189 3.7e-12 75.1 61 63.9
C04p46340 Brassica napus HOM05D000314 ORTHO05D000189 4.9e-12 74.7 117 41.0
BolC4t26220H Brassica oleracea HOM05D000314 ORTHO05D000189 4.9e-12 74.7 117 41.0
Actinidia17539 Actinidia chinensis HOM05D000314 ORTHO05D000189 8.3e-12 73.9 146 38.4
PSO063G4172 Papaver somniferum HOM05D000314 ORTHO05D000189 8.3e-12 73.9 110 40.9
PSO832G3624 Papaver somniferum HOM05D000314 ORTHO05D000189 8.3e-12 73.9 110 40.9
Aqoxy3G03330 Aquilegia oxysepala HOM05D000314 ORTHO05D000189 1.1e-11 73.6 112 44.6
DCAR_025370 Daucus carota HOM05D000314 ORTHO05D000189 1.1e-11 73.6 80 52.5
THA.LOC104808024 Tarenaya hassleriana HOM05D000314 ORTHO05D000189 1.1e-11 73.6 56 66.1
Aa31LG9G16310 Aethionema arabicum HOM05D000314 ORTHO05D000189 1.4e-11 73.2 116 42.2
CSS0049990 Camellia sinensis var. sinensis HOM05D000314 ORTHO05D000189 4.1e-11 71.6 121 44.6
Eucgr.I01935 Eucalyptus grandis HOM05D000314 ORTHO05D000189 4.1e-11 71.6 57 68.4
vmacro05718 Vaccinium macrocarpon HOM05D000314 ORTHO05D000189 4.1e-11 71.6 112 44.6
Phvul.004G027600 Phaseolus vulgaris HOM05D000314 ORTHO05D000189 5.4e-11 71.2 59 66.1
VMungo0464G0385 Vigna mungo HOM05D000314 ORTHO05D000189 5.4e-11 71.2 59 66.1
CsaV3_5G037930 Cucumis sativus L. HOM05D000314 ORTHO05D000189 7.0e-11 70.9 107 38.3
TAR371G1000 Trochodendron aralioides HOM05D000314 ORTHO05D000189 7.0e-11 70.9 109 45.0
CSS0006151 Camellia sinensis var. sinensis HOM05D000314 ORTHO05D000189 9.2e-11 70.5 124 43.5
Ca_02741_v3 Cicer arietinum L. HOM05D000314 ORTHO05D000189 9.2e-11 70.5 131 48.1
Lj2g0002877 Lotus japonicus HOM05D000314 ORTHO05D000189 1.2e-10 70.1 57 66.7
Oeu062120.1 Olea europaea HOM05D000314 ORTHO05D000189 2.7e-10 68.9 56 71.4
Oeu062122.1 Olea europaea HOM05D000314 ORTHO05D000189 2.7e-10 68.9 56 71.4
MELO3C021979.2 Cucumis melo HOM05D000314 ORTHO05D000189 3.5e-10 68.6 108 38.9
Lalb_Chr02g0159631 Lupinus albus HOM05D000314 ORTHO05D000189 6.0e-10 67.8 56 64.3
Ca_04274_v3 Cicer arietinum L. HOM05D000314 ORTHO05D000189 7.8e-10 67.4 67 53.7
Rhsim10G0041100 Rhododendron simsii HOM05D000314 ORTHO05D000189 7.8e-10 67.4 113 44.2
Oeu060934.1 Olea europaea HOM05D000314 ORTHO05D000189 1.0e-09 67.0 88 52.3
Oeu060935.1 Olea europaea HOM05D000314 ORTHO05D000189 1.0e-09 67.0 88 52.3
CARHR151840 Cardamine hirsuta HOM05D000314 ORTHO05D000189 2.3e-09 65.9 56 62.5
Thhalv10004235m.g Eutrema salsugineum HOM05D000314 ORTHO05D000189 2.3e-09 65.9 56 62.5
Rhsim08G0068300 Rhododendron simsii HOM05D000314 ORTHO05D000189 3.0e-09 65.5 109 48.6
ClCG09G018350 Citrullus lanatus HOM05D000314 ORTHO05D000189 3.9e-09 65.1 111 41.4
Manes.17G025635 Manihot esculenta HOM05D000314 ORTHO05D000189 5.0e-09 64.7 118 39.0
Actinidia02711 Actinidia chinensis HOM05D000314 ORTHO05D000189 6.6e-09 64.3 58 55.2
HanXRQChr15g0474081 Helianthus annuus HOM05D000314 ORTHO05D000189 6.6e-09 64.3 111 42.3
Nn3g17173 Nelumbo nucifera HOM05D000314 ORTHO05D000189 1.5e-08 63.2 129 41.9
Sp2g17470 Schrenkiella parvula HOM05D000314 ORTHO05D000189 1.9e-08 62.8 128 36.7
Lalb_Chr06g0175421 Lupinus albus HOM05D000314 ORTHO05D000189 2.5e-08 62.4 112 41.1
PGR083G2079 Punica granatum HOM05D000314 ORTHO05D000189 2.5e-08 62.4 120 42.5
AT3G28850 Arabidopsis thaliana HOM05D000314 ORTHO05D000189 4.3e-08 61.6 123 39.8
Oeu027779.1 Olea europaea HOM05D000314 ORTHO05D000189 5.6e-08 61.2 110 42.7
Sabra17G0072800 Salix brachista HOM05D000314 ORTHO05D000189 5.6e-08 61.2 86 45.3
AL5G18600 Arabidopsis lyrata HOM05D000314 ORTHO05D000189 1.2e-07 60.1 57 59.6
Carub.0005s0739 Capsella rubella HOM05D000314 ORTHO05D000189 1.2e-07 60.1 123 39.8
Medtr6g011640 Medicago truncatula HOM05D000314 ORTHO05D000189 6.2e-07 57.8 27 92.6
CAN.G179.2 Capsicum annuum HOM05D000314 ORTHO05D000189 8.0e-07 57.4 108 42.6
PGR142G1567 Punica granatum HOM05D000314 ORTHO05D000189 1.1e-06 57.0 112 38.4
Lalb_Chr10g0093301 Lupinus albus HOM05D000314 ORTHO05D000189 1.4e-06 56.6 108 39.8
Oeu050218.1 Olea europaea HOM05D000314 ORTHO05D000189 1.4e-06 56.6 121 38.8
Nitab4.5_0000564g0160 Nicotiana tabacum HOM05D000314 ORTHO05D000189 1.8e-06 56.2 109 43.1
CAN.G206.139 Capsicum annuum HOM05D000314 ORTHO05D000189 2.3e-06 55.8 108 42.6
Lsat_1_v5_gn_3_100480 Lactuca sativa HOM05D000314 ORTHO05D000189 2.3e-06 55.8 112 42.0
Peaxi162Scf00129g00313 Petunia axillaris HOM05D000314 ORTHO05D000189 2.3e-06 55.8 108 42.6
SEGI_13927 Sequoiadendron giganteum HOM05D000314 ORTHO05D000189 2.3e-06 55.8 73 47.9
CSS0026367 Camellia sinensis var. sinensis HOM05D000314 ORTHO05D000189 4.0e-06 55.1 109 38.5
Sopen02g032570 Solanum pennellii HOM05D000314 ORTHO05D000189 4.0e-06 55.1 108 40.7
PGSC0003DMG400001319 Solanum tuberosum HOM05D000314 ORTHO05D000189 4.0e-06 55.1 108 40.7
BcaB07g30113 Brassica carinata HOM05D000314 ORTHO05D000189 5.2e-06 54.7 117 34.2
A06p40320 Brassica napus HOM05D000314 ORTHO05D000189 5.2e-06 54.7 56 53.6
BraA06t26949Z Brassica rapa HOM05D000314 ORTHO05D000189 5.2e-06 54.7 56 53.6
Psat1g074680 Pisum sativum HOM05D000314 ORTHO05D000189 5.2e-06 54.7 27 85.2
BcaC06g33644 Brassica carinata HOM05D000314 ORTHO05D000189 6.8e-06 54.3 119 38.7
C07p37730 Brassica napus HOM05D000314 ORTHO05D000189 6.8e-06 54.3 119 38.7
BolC7t44291H Brassica oleracea HOM05D000314 ORTHO05D000189 6.8e-06 54.3 119 38.7
MBI05_g00388_MAGBIO Magnolia biondii HOM05D000314 ORTHO05D000189 6.8e-06 54.3 85 41.2
Nitab4.5_0003081g0030 Nicotiana tabacum HOM05D000314 ORTHO05D000189 8.9e-06 53.9 108 39.8
PGSC0003DMG400006934 Solanum tuberosum HOM05D000314 ORTHO05D000189 8.9e-06 53.9 108 37.0


User provided reference genes

Program Settings