Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.9e-116 422.5 217 100.0
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 4.4e-113 411.4 213 99.1
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 3.7e-112 408.3 213 98.6
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 3.7e-104 381.7 213 92.0
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 5.0e-93 344.7 213 85.9
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 7.3e-84 314.3 213 79.8
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 5.8e-73 278.1 213 72.8
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 6.4e-72 274.6 204 75.0
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 3.4e-57 225.7 207 61.4
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 7.6e-57 224.6 215 60.0
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.9e-55 219.9 154 72.7
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 4.2e-55 218.8 207 60.4
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 5.4e-55 218.4 141 78.0
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 7.1e-55 218.0 154 72.1
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 7.1e-55 218.0 154 72.1
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 9.3e-55 217.6 199 63.3
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 3.5e-54 215.7 213 59.2
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 3.5e-54 215.7 180 65.6
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 3.0e-53 212.6 176 67.0
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 3.0e-53 212.6 187 62.6
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 3.9e-53 212.2 169 68.0
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 5.1e-53 211.8 174 67.8
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 1.1e-52 210.7 173 62.4
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 1.1e-52 210.7 209 58.9
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 1.5e-52 210.3 139 77.0
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 1.9e-52 209.9 167 67.1
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 2.5e-52 209.5 186 61.8
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 4.3e-52 208.8 208 57.7
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 5.6e-52 208.4 167 69.5
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 7.3e-52 208.0 165 69.7
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 9.6e-52 207.6 176 63.6
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 9.6e-52 207.6 154 71.4
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 2.1e-51 206.5 207 59.4
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 6.2e-51 204.9 167 63.5
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 6.2e-51 204.9 209 58.9
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 6.2e-51 204.9 172 63.4
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 1.4e-50 203.8 154 71.4
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 1.4e-50 203.8 172 64.0
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 1.8e-50 203.4 156 70.5
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 2.4e-50 203.0 208 57.2
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 3.1e-50 202.6 198 58.1
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 5.3e-50 201.8 153 66.7
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 6.9e-50 201.4 146 69.2
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 1.2e-49 200.7 161 65.8
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 1.5e-49 200.3 213 54.5
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 1.5e-49 200.3 155 67.1
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 1.5e-49 200.3 212 57.1
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 3.4e-49 199.1 164 64.0
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 3.4e-49 199.1 129 74.4
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 5.8e-49 198.4 127 77.2
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 7.6e-49 198.0 127 76.4
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 1.3e-48 197.2 160 64.4
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 1.7e-48 196.8 172 64.0
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 1.7e-48 196.8 154 68.8
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 2.2e-48 196.4 153 69.3
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 2.9e-48 196.1 168 62.5
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 2.9e-48 196.1 207 56.5
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 3.8e-48 195.7 123 79.7
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 3.8e-48 195.7 133 72.2
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 1.4e-47 193.7 161 63.4
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 1.4e-47 193.7 170 65.3
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 3.2e-47 192.6 126 75.4
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 3.2e-47 192.6 190 57.9
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 7.1e-47 191.4 229 51.1
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 9.3e-47 191.0 128 74.2
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 3.5e-46 189.1 168 60.1
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 6.0e-46 188.3 159 64.2
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 3.0e-45 186.0 145 66.9
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 5.1e-45 185.3 160 60.6
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 5.1e-45 185.3 113 80.5
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 3.3e-44 182.6 143 65.7
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 1.3e-43 180.6 126 73.8
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 1.6e-43 180.3 174 58.0
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 6.2e-43 178.3 114 74.6
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 1.4e-42 177.2 147 61.9
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 2.9e-40 169.5 151 60.3
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 1.9e-39 166.8 127 66.9
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 9.3e-39 164.5 130 63.1
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 2.7e-38 162.9 129 63.6
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 6.0e-38 161.8 130 66.2
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 2.3e-37 159.8 152 58.6
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 8.7e-37 157.9 186 49.5
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 8.1e-35 151.4 122 61.5
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 1.4e-34 150.6 122 63.1
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 1.8e-34 150.2 170 50.6
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 2.0e-33 146.7 97 75.3
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 1.0e-32 144.4 85 82.4
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 1.0e-32 144.4 92 77.2
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 3.2e-31 139.4 101 74.3
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.1e-30 136.7 83 84.3
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 2.7e-30 136.3 123 59.3
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 3.0e-29 132.9 121 57.0
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.9e-29 132.5 94 74.5
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 6.7e-29 131.7 83 78.3
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 9.6e-28 127.9 154 50.0
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 4.1e-26 122.5 71 78.9
Sed0014969 Sechium edule HOM05D007159 ORTHO05D009068 5.0e-24 115.5 140 51.4
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 2.5e-23 113.2 80 70.0
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 6.3e-19 98.6 92 58.7
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 6.9e-18 95.1 49 91.8
Sed0016161 Sechium edule HOM05D007159 ORTHO05D009068 9.1e-18 94.7 70 70.0
CANSAT78G1490 Cannabis sativa HOM05D007159 ORTHO05D009068 3.8e-16 89.4 128 46.1
PRCOL_00002415 Prasinoderma coloniale HOM05D007159 ORTHO05D009068 9.4e-15 84.7 123 43.1
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 1.6e-14 84.0 64 62.5
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 4.4e-12 75.9 91 52.7
MCO13G186 Micromonas commoda HOM05D007159 ORTHO05D009068 2.8e-11 73.2 162 34.6
Ciclev10012634m.g Citrus clementina HOM05D009116 ORTHO05D011299 2.4e-10 70.1 119 33.6
COL.COLO4_34141 Corchorus olitorius HOM05D009116 ORTHO05D011299 3.1e-10 69.7 174 31.6
Os04g0600100 Oryza sativa ssp. japonica HOM05D009116 ORTHO05D011299 4.5e-09 65.9 125 32.8
unitig_52.g17699 Utricularia gibba HOM05D009116 ORTHO05D011299 7.7e-09 65.1 111 33.3
MSTRG.26944 Avicennia marina HOM05D009116 ORTHO05D011299 2.2e-08 63.5 205 27.8
Migut.F00112 Erythranthe guttata HOM05D009116 ORTHO05D011299 1.1e-07 61.2 142 30.3
Hund27206 Selenicereus undatus HOM05D009116 ORTHO05D011299 1.9e-07 60.5 156 30.8
Sopen06g029290 Solanum pennellii HOM05D009116 ORTHO05D011299 1.9e-07 60.5 192 27.6
Oeu038114.2 Olea europaea HOM05D002675 ORTHO05D003322 2.5e-07 60.1 152 29.6
Rhsim03G0219300 Rhododendron simsii HOM05D009116 ORTHO05D011299 2.5e-07 60.1 143 30.1
Nitab4.5_0000115g0230 Nicotiana tabacum HOM05D009116 ORTHO05D011299 4.2e-07 59.3 178 28.7
Eucgr.H00677 Eucalyptus grandis HOM05D009116 ORTHO05D011299 5.5e-07 58.9 167 28.7
Solyc06g072930.4 Solanum lycopersicum HOM05D009116 ORTHO05D011299 5.5e-07 58.9 194 27.3
PGR031G3920 Punica granatum HOM05D009116 ORTHO05D011299 7.2e-07 58.5 196 28.6
Nitab4.5_0003012g0090 Nicotiana tabacum HOM05D009116 ORTHO05D011299 9.4e-07 58.2 178 29.2
QL04p022221 Quercus lobata HOM05D000002 ORTHO05D000001 9.4e-07 58.2 96 44.8
EL10Ac1g00288 Beta vulgaris HOM05D009116 ORTHO05D011299 1.2e-06 57.8 143 30.8
CDE02G3635 Ceratophyllum demersum HOM05D009116 ORTHO05D011299 2.7e-06 56.6 115 34.8


User provided reference genes

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