Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 7.7e-67 256.9 121 100.0
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 7.7e-67 256.9 121 100.0
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 7.7e-67 256.9 121 100.0
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 2.9e-66 255.0 120 99.2
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 3.8e-66 254.6 121 99.2
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 5.5e-65 250.8 121 97.5
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 2.8e-53 211.8 120 83.3
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 4.8e-53 211.1 122 84.4
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 6.3e-53 210.7 122 82.0
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 1.4e-52 209.5 122 82.0
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 1.8e-52 209.1 122 84.4
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 1.8e-52 209.1 121 83.5
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 2.4e-52 208.8 122 83.6
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 5.3e-52 207.6 122 81.1
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 7.0e-52 207.2 121 83.5
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 9.1e-52 206.8 122 82.0
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 1.2e-51 206.5 121 81.8
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 1.6e-51 206.1 122 82.0
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 1.6e-51 206.1 121 81.8
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 1.6e-51 206.1 122 83.6
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 1.6e-51 206.1 121 82.6
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 2.0e-51 205.7 122 81.1
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 2.0e-51 205.7 122 79.5
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 2.0e-51 205.7 121 82.6
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 2.0e-51 205.7 121 82.6
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 4.5e-51 204.5 122 78.7
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 1.0e-50 203.4 122 78.7
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 1.3e-50 203.0 122 77.9
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 2.2e-50 202.2 122 77.9
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 2.9e-50 201.8 122 78.7
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 2.9e-50 201.8 122 77.9
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 5.0e-50 201.1 122 77.9
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 5.0e-50 201.1 122 79.5
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 6.5e-50 200.7 122 79.5
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 6.5e-50 200.7 122 79.5
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 6.5e-50 200.7 121 80.2
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 8.5e-50 200.3 122 78.7
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 1.1e-49 199.9 122 77.9
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 3.2e-49 198.4 123 78.9
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 4.2e-49 198.0 122 79.5
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 4.2e-49 198.0 122 77.9
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 4.2e-49 198.0 122 77.9
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 5.5e-49 197.6 122 77.9
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 9.4e-49 196.8 129 77.5
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 2.7e-48 195.3 123 78.0
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 2.7e-48 195.3 122 75.4
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 4.7e-48 194.5 122 76.2
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 4.7e-48 194.5 122 77.0
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 6.1e-48 194.1 120 78.3
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 1.4e-47 193.0 122 77.0
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 1.4e-47 193.0 122 75.4
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 1.4e-47 193.0 120 77.5
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 2.3e-47 192.2 120 76.7
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 8.8e-47 190.3 122 74.6
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 3.4e-46 188.3 122 73.8
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 1.3e-45 186.4 122 73.8
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 2.2e-45 185.7 118 75.4
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 6.3e-45 184.1 123 75.6
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 4.1e-44 181.4 136 69.1
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 5.4e-44 181.0 120 75.0
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 9.1e-44 180.3 125 70.4
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 1.2e-43 179.9 118 72.0
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 2.7e-43 178.7 121 72.7
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 3.5e-43 178.3 117 73.5
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 4.5e-43 177.9 118 72.9
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 5.9e-43 177.6 120 70.8
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 5.9e-43 177.6 118 72.9
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 1.0e-42 176.8 122 72.1
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 1.3e-42 176.4 118 72.9
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 1.3e-42 176.4 118 72.9
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 1.3e-42 176.4 118 72.9
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 1.3e-42 176.4 118 72.9
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 2.2e-42 175.6 125 68.8
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 2.9e-42 175.3 118 72.0
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 2.9e-42 175.3 118 72.0
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 8.5e-42 173.7 118 70.3
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 1.1e-41 173.3 118 69.5
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 1.5e-41 172.9 118 71.2
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 1.5e-41 172.9 118 71.2
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 3.2e-41 171.8 118 70.3
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 3.2e-41 171.8 118 70.3
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 3.2e-41 171.8 118 70.3
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 4.4e-38 161.4 132 64.4
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 4.9e-37 157.9 94 78.7
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 8.3e-37 157.1 93 80.6
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 1.1e-36 156.8 117 65.0
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 1.4e-36 156.4 88 81.8
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 2.4e-36 155.6 93 79.6
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 2.4e-36 155.6 121 66.1
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 3.1e-36 155.2 120 65.8
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 3.1e-36 155.2 91 80.2
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 4.1e-36 154.8 88 79.5
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 4.1e-36 154.8 88 79.5
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 4.1e-36 154.8 93 80.6
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 2.0e-35 152.5 90 78.9
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 5.9e-35 151.0 91 79.1
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 5.9e-35 151.0 118 61.9
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 5.9e-35 151.0 93 78.5
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 6.6e-34 147.5 91 80.2
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 1.1e-33 146.7 91 79.1
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 1.1e-33 146.7 102 70.6
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 1.9e-33 146.0 91 76.9
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 1.6e-32 142.9 88 75.0
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 6.1e-32 141.0 91 69.2
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 8.0e-32 140.6 102 66.7
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 1.0e-31 140.2 86 75.6
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 1.8e-31 139.4 75 86.7
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 2.3e-31 139.0 72 88.9
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 2.3e-31 139.0 103 68.0
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 4.0e-31 138.3 100 67.0
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 2.0e-30 136.0 116 60.3
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 2.0e-30 136.0 116 60.3
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 9.8e-30 133.7 91 68.1
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 8.6e-26 120.6 99 63.6
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 1.9e-25 119.4 67 79.1
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 1.2e-24 116.7 89 60.7
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 7.3e-17 90.9 54 77.8
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 8.9e-15 84.0 119 37.8
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 1.5e-14 83.2 111 41.4
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 1.3e-13 80.1 121 41.3
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 4.6e-11 71.6 146 32.9
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 7.8e-11 70.9 117 36.8
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 3.3e-09 65.5 30 90.0
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 4.0e-07 58.5 33 84.8


User provided reference genes

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