Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 0.0e+00 1890.9 971 100.0
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 0.0e+00 1855.1 971 98.1
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 0.0e+00 1787.3 971 95.8
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 0.0e+00 1706.4 988 91.1
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 0.0e+00 1659.4 1008 87.9
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 0.0e+00 1657.1 946 92.5
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 0.0e+00 1612.4 987 87.9
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 0.0e+00 1221.8 898 75.5
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 1.9e-285 986.1 1080 55.3
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 1.6e-255 886.7 1078 52.5
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 3.3e-253 879.0 1084 52.2
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 5.4e-179 632.5 1100 41.3
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 1.3e-172 611.3 1103 40.3
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 9.0e-158 562.0 1044 39.5
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 3.9e-137 493.4 1038 38.6
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 2.8e-135 487.3 1029 37.1
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 6.9e-134 482.6 1062 36.3
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 1.2e-133 481.9 1065 36.7
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 1.5e-133 481.5 1090 36.1
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 6.5e-132 476.1 1008 38.0
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 8.4e-132 475.7 1061 36.5
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 3.2e-131 473.8 1052 36.2
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 3.5e-130 470.3 1028 38.3
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 8.7e-129 465.7 1018 36.8
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 5.7e-128 463.0 1042 35.8
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 1.3e-127 461.8 1041 35.7
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 1.4e-123 448.4 1076 35.0
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 1.4e-123 448.4 1053 36.1
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 5.1e-121 439.9 1028 35.4
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 2.2e-119 434.5 994 35.5
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 3.7e-119 433.7 1102 34.2
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 3.1e-118 430.6 1045 34.2
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 2.6e-117 427.6 1038 34.8
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 4.5e-117 426.8 1039 34.3
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 1.0e-116 425.6 572 44.6
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 2.9e-116 424.1 1006 35.0
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 4.4e-112 410.2 1048 34.0
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 1.1e-110 405.6 1033 33.4
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 2.1e-106 391.3 1118 33.4
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 1.4e-105 388.7 1001 34.2
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 6.7e-105 386.3 1049 33.0
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 8.8e-105 386.0 1028 33.1
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 1.1e-104 385.6 1028 32.4
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 1.5e-104 385.2 1126 32.9
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 7.4e-104 382.9 1097 32.4
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 1.3e-103 382.1 1116 32.8
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 4.1e-102 377.1 1077 33.0
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 7.0e-102 376.3 1035 32.1
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 1.3e-100 372.1 933 33.7
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 1.7e-100 371.7 1032 32.7
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 3.8e-100 370.5 1036 32.7
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 5.0e-100 370.2 1096 31.9
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 6.1e-98 363.2 1078 32.1
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 4.0e-97 360.5 1041 32.0
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 1.2e-96 359.0 998 31.9
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 2.0e-96 358.2 1030 31.7
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 2.2e-95 354.8 651 37.9
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 1.2e-93 349.0 1046 30.6
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 2.7e-93 347.8 884 33.5
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 2.7e-93 347.8 1155 30.6
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 1.3e-92 345.5 1063 32.2
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 9.4e-91 339.3 994 31.9
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 4.0e-89 334.0 976 32.0
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 7.5e-88 329.7 1029 31.4
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 2.2e-87 328.2 1069 30.0
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 8.3e-87 326.2 944 30.0
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 2.0e-85 321.6 928 30.9
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 5.0e-84 317.0 582 36.8
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 1.1e-83 315.8 906 32.3
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 3.6e-82 310.8 1017 30.2
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 4.7e-82 310.5 1036 30.4
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 1.4e-81 308.9 1020 30.5
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 8.9e-81 306.2 1003 29.2
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 5.7e-80 303.5 540 38.7
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 7.8e-77 293.1 660 33.5
vmacro05021 Vaccinium macrocarpon HOM05D006048 ORTHO05D007642 7.8e-77 293.1 1053 29.9
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 1.0e-76 292.7 1001 30.1
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 7.3e-75 286.6 1061 29.3
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 6.1e-74 283.5 639 32.6
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 8.0e-74 283.1 811 30.8
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 1.0e-73 282.7 518 36.5
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 7.5e-72 276.6 590 33.9
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 3.7e-71 274.2 368 42.7
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 4.9e-71 273.9 1068 29.1
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 1.4e-70 272.3 653 32.6
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 2.4e-70 271.6 1021 28.3
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 5.4e-70 270.4 1020 28.0
FvH4_3g29010 Fragaria vesca HOM05D006048 ORTHO05D035641 2.7e-69 268.1 159 91.2
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 1.0e-68 266.2 368 41.8
CiPaw.07G016800 Carya illinoinensis HOM05D006048 ORTHO05D007642 2.3e-68 265.0 854 32.0
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 3.0e-68 264.6 1022 28.6
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 3.0e-68 264.6 1017 29.4
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 3.9e-68 264.2 1068 27.9
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 6.6e-68 263.5 1019 28.0
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 1.1e-65 256.1 1029 27.8
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 1.1e-65 256.1 1030 27.2
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 1.3e-63 249.2 1014 26.8
ATR0626G180 Amborella trichopoda HOM05D006048 ORTHO05D007642 1.4e-57 229.2 370 39.5
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 1.8e-57 228.8 925 28.4
CDE05G2441 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 3.2e-54 218.0 377 36.3
Atru.chr2.428 Acer truncatum HOM05D006048 ORTHO05D007642 2.5e-51 208.4 180 53.3
Os11g0148400 Oryza sativa ssp. japonica HOM05D006048 ORTHO05D007642 1.7e-44 185.7 351 33.0
Manes.08G121600 Manihot esculenta HOM05D006048 ORTHO05D007642 1.1e-43 183.0 734 31.3
Psat7g077840 Pisum sativum HOM05D006048 ORTHO05D007642 4.8e-42 177.6 176 47.7
SEGI_14627 Sequoiadendron giganteum HOM05D006048 ORTHO05D007642 8.1e-42 176.8 553 28.2
FvH4_3g17890 Fragaria vesca HOM05D006048 ORTHO05D035641 6.0e-37 160.6 150 68.0
Atru.chr2.429 Acer truncatum HOM05D006048 ORTHO05D007642 1.6e-34 152.5 218 46.8
CDE05G0200 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 2.1e-34 152.1 284 35.2
Lj9A18T10 Lonicera japonica HOM05D006048 ORTHO05D007642 4.5e-32 144.4 301 39.2
Lj9A29T9 Lonicera japonica HOM05D006048 ORTHO05D007642 7.6e-32 143.7 301 39.2
HPP92_011281 Vanilla planifolia HOM05D006048 ORTHO05D007642 1.1e-30 139.8 378 28.8
HPP92_011303 Vanilla planifolia HOM05D006048 ORTHO05D007642 1.1e-30 139.8 379 28.8
Mapoly0011s0030 Marchantia polymorpha HOM05D006048 ORTHO05D007642 8.7e-28 130.2 237 31.6
FAN11G2287 Fragaria x ananassa HOM05D006048 ORTHO05D035641 1.2e-24 119.8 75 82.7
MBI19_g40207_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 3.4e-24 118.2 256 35.2
AagrBONN_evm.TU.Sc2ySwM_344.3982 Anthoceros agrestis HOM05D006048 ORTHO05D007642 4.9e-23 114.4 340 26.8
FAN18G2849 Fragaria x ananassa HOM05D006048 ORTHO05D007642 8.7e-20 103.6 61 91.8
CiPaw.08G165600 Carya illinoinensis HOM05D006048 ORTHO05D007642 1.0e-15 90.1 502 28.1
CiPaw.08G165500 Carya illinoinensis HOM05D006048 ORTHO05D007642 1.4e-14 86.3 93 47.3
SMO203G0156 Selaginella moellendorffii HOM05D006048 ORTHO05D007642 1.2e-13 83.2 199 30.2
Actinidia01443 Actinidia chinensis HOM05D006048 ORTHO05D007642 3.5e-13 81.6 119 42.0
Atru.chr2.430 Acer truncatum HOM05D006048 ORTHO05D007642 5.9e-08 64.3 122 36.9
Atru.chr2.431 Acer truncatum HOM05D006048 ORTHO05D007642 5.0e-07 61.2 183 33.3


User provided reference genes

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