Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 9.4e-124 447.2 284 100.0
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.0e-109 400.6 284 78.9
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 1.8e-90 336.7 284 83.8
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.0e-81 306.6 228 77.2
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 6.8e-66 255.0 241 73.4
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 1.2e-54 217.6 276 48.9
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 1.4e-50 204.1 280 46.1
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 1.8e-45 187.2 282 42.9
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 3.9e-45 186.0 226 69.5
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 1.9e-44 183.7 281 57.3
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 1.3e-43 181.0 280 41.8
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 1.4e-42 177.6 226 64.2
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 7.6e-41 171.8 300 44.3
FAN05G0748 Fragaria x ananassa HOM05D007214 ORTHO05D008907 4.9e-40 169.1 113 85.0
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 6.5e-40 168.7 306 43.5
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 1.1e-39 167.9 225 48.4
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 3.5e-38 162.9 233 42.9
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 5.1e-37 159.1 223 54.7
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 4.3e-36 156.0 284 36.6
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 6.3e-35 152.1 288 42.7
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 2.4e-34 150.2 295 35.3
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 5.9e-33 145.6 225 58.2
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 1.6e-30 137.5 282 43.3
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 1.6e-30 137.5 280 35.4
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 2.1e-30 137.1 227 52.9
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 3.6e-30 136.3 282 43.3
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 7.9e-30 135.2 282 41.8
BcaC06g30923 Brassica carinata HOM05D007214 ORTHO05D008907 1.8e-29 134.0 281 48.4
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 3.9e-29 132.9 227 41.4
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 6.7e-29 132.1 223 40.8
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 1.5e-28 131.0 235 40.4
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 2.5e-28 130.2 224 40.2
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 7.4e-28 128.6 281 40.9
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 7.4e-28 128.6 223 40.4
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 1.6e-27 127.5 232 38.4
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 2.2e-27 127.1 274 31.4
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 3.7e-27 126.3 280 38.2
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 6.3e-27 125.6 224 41.5
THA.LOC104805424 Tarenaya hassleriana HOM05D007214 ORTHO05D008907 1.1e-26 124.8 282 46.5
BolC7t44250H Brassica oleracea HOM05D007214 ORTHO05D008907 1.8e-26 124.0 287 40.4
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 9.0e-26 121.7 223 48.9
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 1.5e-25 120.9 234 54.3
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 1.5e-25 120.9 231 45.9
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 1.5e-25 120.9 243 49.8
Migut.H00870 Erythranthe guttata HOM05D007214 ORTHO05D008907 4.5e-25 119.4 281 45.9
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 7.7e-25 118.6 223 42.2
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 1.0e-24 118.2 233 38.6
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 2.2e-24 117.1 223 42.6
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 5.0e-24 115.9 262 34.0
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 6.5e-24 115.5 117 56.4
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 8.5e-24 115.2 225 52.4
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 1.9e-23 114.0 223 49.8
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 2.5e-23 113.6 231 39.0
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 3.2e-23 113.2 223 37.7
ECA232G1410 Erigeron canadensis HOM05D007214 ORTHO05D008907 7.2e-23 112.1 286 43.7
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 1.6e-22 110.9 281 31.7
Gohir.D07G223900 Gossypium hirsutum HOM05D007214 ORTHO05D008907 1.6e-22 110.9 191 58.1
SGA_v2.0_scaffold205G41734 Striga asiatica HOM05D007214 ORTHO05D008907 1.6e-22 110.9 274 47.1
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 6.1e-22 109.0 224 34.8
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 1.0e-21 108.2 124 50.8
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 1.0e-21 108.2 262 47.7
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 3.9e-21 106.3 226 47.3
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 6.7e-21 105.5 223 50.2
RhsimUnG0169100 Rhododendron simsii HOM05D007214 ORTHO05D008907 2.6e-20 103.6 224 49.1
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 2.8e-19 100.1 225 33.3
Dinv35004 Davidia involucrata HOM05D007214 ORTHO05D008907 9.1e-18 95.1 202 54.0
Thecc.04G070100 Theobroma cacao HOM05D007214 ORTHO05D008907 3.4e-17 93.2 191 52.4
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 4.5e-17 92.8 128 60.9
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 7.7e-17 92.0 226 48.2
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 1.0e-16 91.7 223 44.8
Sed0019253 Sechium edule HOM05D007214 ORTHO05D008907 1.0e-16 91.7 240 47.5
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 3.8e-16 89.7 194 45.9
COL.COLO4_36999 Corchorus olitorius HOM05D007214 ORTHO05D008907 8.5e-16 88.6 205 52.2
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 2.5e-15 87.0 147 37.4
Lsat_1_v5_gn_4_180400 Lactuca sativa HOM05D007214 ORTHO05D008907 2.1e-14 84.0 207 47.8
Psat3g176600 Pisum sativum HOM05D007214 ORTHO05D008907 2.7e-14 83.6 129 41.1
Cc07_g02800 Coffea canephora HOM05D007214 ORTHO05D008907 3.6e-14 83.2 225 48.0
Oeu060587.1 Olea europaea HOM05D007214 ORTHO05D008907 4.7e-14 82.8 122 41.0
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 4.7e-14 82.8 123 40.7
Rhsim10G0029100 Rhododendron simsii HOM05D007214 ORTHO05D008907 6.1e-14 82.4 279 29.7
HPP92_010494 Vanilla planifolia HOM05D007214 ORTHO05D008907 1.0e-13 81.6 238 31.9
Carub.0005s0686 Capsella rubella HOM05D007214 ORTHO05D008907 1.8e-13 80.9 221 43.0
Sabra17G0063300 Salix brachista HOM05D007214 ORTHO05D008907 8.8e-13 78.6 86 48.8
Thhalv10004882m.g Eutrema salsugineum HOM05D007214 ORTHO05D008907 1.1e-12 78.2 224 48.2
Sabra07G0063000 Salix brachista HOM05D007214 ORTHO05D008907 5.7e-12 75.9 124 40.3
Eucgr.J02159 Eucalyptus grandis HOM05D007214 ORTHO05D008907 7.4e-12 75.5 62 66.1
Aa31LG2G4670 Aethionema arabicum HOM05D007214 ORTHO05D008907 1.3e-11 74.7 224 41.1
DCAR_011179 Daucus carota HOM05D007214 ORTHO05D008907 1.8e-10 70.9 200 33.5
BraA06t26977Z Brassica rapa HOM05D007214 ORTHO05D008907 2.0e-09 67.4 226 45.6
PGSC0003DMG400001300 Solanum tuberosum HOM05D007214 ORTHO05D008907 3.5e-09 66.6 281 28.8
TAR629G0039 Trochodendron aralioides HOM05D000068 ORTHO05D008907 3.5e-09 66.6 62 53.2
TPR.G39060 Trifolium pratense HOM05D007214 ORTHO05D008907 5.9e-09 65.9 146 37.0
MBI15_g38192_MAGBIO Magnolia biondii HOM05D007214 ORTHO05D008907 1.3e-08 64.7 62 56.5
CsaV3_3G041890 Cucumis sativus L. HOM05D062301 ORTHO05D008907 1.7e-08 64.3 219 39.7
GSVIVG01032574001 Vitis vinifera HOM05D007214 ORTHO05D008907 1.5e-07 61.2 44 65.9
TPR.G39121 Trifolium pratense HOM05D007214 ORTHO05D008907 7.2e-07 58.9 245 26.1
unitig_746.g26578 Utricularia gibba HOM05D007214 ORTHO05D008907 7.2e-07 58.9 52 61.5
Sabra17G0065100 Salix brachista HOM05D007214 ORTHO05D008907 1.6e-06 57.8 97 37.1
MSTRG.23970 Avicennia marina HOM05D007214 ORTHO05D008907 2.7e-06 57.0 43 65.1
Oeu060589.1 Olea europaea HOM05D007214 ORTHO05D008907 2.7e-06 57.0 40 70.0
Hund13295 Selenicereus undatus HOM05D007214 ORTHO05D008907 6.1e-06 55.8 144 29.9


User provided reference genes

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