Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G2526 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.8e-154 549.3 290 100.0
FvH4_6g05320 Fragaria vesca HOM05D006416 ORTHO05D008054 8.9e-154 547.0 290 99.7
FAN14G3791 Fragaria x ananassa HOM05D006416 ORTHO05D008054 2.6e-153 545.4 290 99.3
FAN02G3793 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.7e-152 542.7 290 99.0
FAN05G2936 Fragaria x ananassa HOM05D006416 ORTHO05D008054 4.9e-152 541.2 290 98.3
FAN05G0060 Fragaria x ananassa HOM05D006416 ORTHO05D008054 8.3e-152 540.4 290 98.3
FAN09G2836 Fragaria x ananassa HOM05D006416 ORTHO05D008054 5.1e-149 531.2 290 97.6
RcHm_v2.0_Chr3g0454061 Rosa chinensis HOM05D006416 ORTHO05D008054 6.8e-146 520.8 290 94.1
Prupe.6G330400 Prunus persica HOM05D006416 ORTHO05D008054 9.6e-132 473.8 298 85.2
MD04G1209400 Malus domestica HOM05D006416 ORTHO05D008054 1.2e-129 466.8 293 84.3
QL03p004338 Quercus lobata HOM05D006416 ORTHO05D008054 1.3e-128 463.4 296 82.8
MD12G1224000 Malus domestica HOM05D006416 ORTHO05D008054 2.9e-128 462.2 293 83.6
Haze_04238 Corylus avellana HOM05D006416 ORTHO05D008054 1.5e-124 449.9 299 80.3
Manes.09G163500 Manihot esculenta HOM05D006416 ORTHO05D008054 1.5e-124 449.9 298 80.2
Ciclev10002001m.g Citrus clementina HOM05D006416 ORTHO05D008054 1.4e-122 443.4 302 79.1
Cfa006543 Carpinus fangiana HOM05D006416 ORTHO05D008054 1.8e-122 443.0 300 79.0
EL10Ac4g09303 Beta vulgaris HOM05D006416 ORTHO05D008054 2.6e-121 439.1 298 78.5
CiPaw.08G166800 Carya illinoinensis HOM05D006416 ORTHO05D008054 3.8e-120 435.3 298 77.2
Potri.013G026400 Populus trichocarpa HOM05D006416 ORTHO05D008054 3.8e-120 435.3 298 78.5
Gohir.A11G262900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 1.1e-119 433.7 298 77.5
COL.COLO4_13518 Corchorus olitorius HOM05D006416 ORTHO05D008054 1.4e-119 433.3 299 75.6
Duzib128G1696 Durio zibethinus HOM05D006416 ORTHO05D008054 2.4e-119 432.6 298 77.5
Potri.005G038700 Populus trichocarpa HOM05D006416 ORTHO05D008054 2.4e-119 432.6 298 76.8
Sabra05G0037800 Salix brachista HOM05D006416 ORTHO05D008054 5.5e-119 431.4 298 76.5
Gohir.D11G272900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 7.1e-119 431.0 298 77.2
Glyma.10G157100 Glycine max HOM05D006416 ORTHO05D008054 1.2e-118 430.3 298 77.2
CANSAT54G1414 Cannabis sativa HOM05D006416 ORTHO05D008054 2.1e-118 429.5 299 76.3
Rhsim07G0179600 Rhododendron simsii HOM05D006416 ORTHO05D008054 2.1e-118 429.5 298 77.5
Cpa.g.sc48.9 Carica papaya HOM05D006416 ORTHO05D008054 4.6e-118 428.3 300 77.0
Glyma.20G231600 Glycine max HOM05D006416 ORTHO05D008054 7.9e-118 427.6 298 76.8
Gorai.007G294200 Gossypium raimondii HOM05D006416 ORTHO05D008054 1.0e-117 427.2 298 76.8
Sed0000831 Sechium edule HOM05D006416 ORTHO05D008054 1.0e-117 427.2 290 78.3
Phvul.007G182400 Phaseolus vulgaris HOM05D006416 ORTHO05D008054 1.3e-117 426.8 298 76.8
Thecc.05G308500 Theobroma cacao HOM05D006416 ORTHO05D008054 1.3e-117 426.8 298 76.5
ClCG02G016070 Citrullus lanatus HOM05D006416 ORTHO05D008054 1.8e-117 426.4 299 75.6
Duzib177G0710 Durio zibethinus HOM05D006416 ORTHO05D008054 1.8e-117 426.4 298 77.2
Lalb_Chr06g0167821 Lupinus albus HOM05D006416 ORTHO05D008054 2.3e-117 426.0 296 77.7
Atru.chr2.491 Acer truncatum HOM05D006416 ORTHO05D008054 5.1e-117 424.9 304 77.6
Actinidia23608 Actinidia chinensis HOM05D006416 ORTHO05D008054 6.7e-117 424.5 298 75.5
Ah.06g190130 Amaranthus hybridus HOM05D006416 ORTHO05D008054 8.7e-117 424.1 298 77.5
MELO3C004307.2 Cucumis melo HOM05D006416 ORTHO05D008054 1.1e-116 423.7 298 75.2
Nn4g26146 Nelumbo nucifera HOM05D006416 ORTHO05D008054 1.9e-116 422.9 298 76.5
Lj9A681T37 Lonicera japonica HOM05D006416 ORTHO05D008054 2.5e-116 422.5 300 77.3
GSVIVG01000004001 Vitis vinifera HOM05D006416 ORTHO05D008054 3.3e-116 422.2 298 75.8
Ca_10088_v3 Cicer arietinum L. HOM05D006416 ORTHO05D008054 4.3e-116 421.8 292 76.4
Nitab4.5_0007238g0010 Nicotiana tabacum HOM05D006416 ORTHO05D008054 4.3e-116 421.8 299 75.6
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea HOM05D006416 ORTHO05D008054 5.6e-116 421.4 286 78.0
PGR031G2709 Punica granatum HOM05D006416 ORTHO05D008054 1.3e-115 420.2 290 77.6
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea HOM05D006416 ORTHO05D008054 1.6e-115 419.9 286 77.3
CAN.G1134.18 Capsicum annuum HOM05D006416 ORTHO05D008054 1.6e-115 419.9 295 76.6
Psat6g148880 Pisum sativum HOM05D006416 ORTHO05D008054 1.6e-115 419.9 292 76.7
Eucgr.H04456 Eucalyptus grandis HOM05D006416 ORTHO05D008054 4.8e-115 418.3 294 76.5
TWI12G1406 Tripterygium wilfordii HOM05D006416 ORTHO05D008054 4.8e-115 418.3 298 75.8
TPR.G2722 Trifolium pratense HOM05D006416 ORTHO05D008054 2.4e-114 416.0 288 76.0
Medtr1g082420 Medicago truncatula HOM05D006416 ORTHO05D008054 5.3e-114 414.8 293 76.1
Sopen01g042190 Solanum pennellii HOM05D006416 ORTHO05D008054 5.3e-114 414.8 293 75.4
SpUn0002_0460 Schrenkiella parvula HOM05D006416 ORTHO05D008054 6.9e-114 414.5 294 77.2
Peaxi162Scf00434g00329 Petunia axillaris HOM05D006416 ORTHO05D008054 1.2e-113 413.7 292 74.7
PGSC0003DMG402028574 Solanum tuberosum HOM05D006416 ORTHO05D008054 1.2e-113 413.7 293 75.4
Lj5g0006935 Lotus japonicus HOM05D006416 ORTHO05D008054 1.5e-113 413.3 290 74.8
Nitab4.5_0004940g0060 Nicotiana tabacum HOM05D006416 ORTHO05D008054 3.4e-113 412.1 299 73.6
Nn1g02093 Nelumbo nucifera HOM05D006416 ORTHO05D008054 1.3e-112 410.2 306 73.5
Solyc01g098640.3 Solanum lycopersicum HOM05D006416 ORTHO05D008054 1.7e-112 409.8 292 74.7
THA.LOC104823736 Tarenaya hassleriana HOM05D006416 ORTHO05D008054 2.9e-112 409.1 298 76.2
TAR362G1050 Trochodendron aralioides HOM05D006416 ORTHO05D008054 3.8e-112 408.7 298 73.8
Sc16g0008340 Simmondsia chinensis HOM05D006416 ORTHO05D008054 7.1e-111 404.4 290 75.5
BcaB04g20144 Brassica carinata HOM05D006416 ORTHO05D008054 1.2e-110 403.7 295 74.9
Cc02_g32670 Coffea canephora HOM05D006416 ORTHO05D008054 2.7e-110 402.5 295 73.9
CsaV3_2G004910 Cucumis sativus L. HOM05D006416 ORTHO05D008054 4.6e-110 401.7 313 69.3
AL1G65240 Arabidopsis lyrata HOM05D006416 ORTHO05D008054 6.0e-110 401.4 293 74.1
Thhalv10023632m.g Eutrema salsugineum HOM05D006416 ORTHO05D008054 6.0e-110 401.4 291 74.9
BcaC09g49606 Brassica carinata HOM05D006416 ORTHO05D008054 7.9e-110 401.0 294 74.8
A01p27150 Brassica napus HOM05D006416 ORTHO05D008054 7.9e-110 401.0 293 74.7
C01p34560 Brassica napus HOM05D006416 ORTHO05D008054 7.9e-110 401.0 294 74.8
BolC1t03427H Brassica oleracea HOM05D006416 ORTHO05D008054 7.9e-110 401.0 294 74.8
BraA01t02850Z Brassica rapa HOM05D006416 ORTHO05D008054 7.9e-110 401.0 293 74.7
Carub.0002s0864 Capsella rubella HOM05D006416 ORTHO05D008054 7.9e-110 401.0 293 75.4
AT1G54780 Arabidopsis thaliana HOM05D006416 ORTHO05D008054 1.0e-109 400.6 293 74.4
Aa31LG2G11890 Aethionema arabicum HOM05D006416 ORTHO05D008054 1.8e-109 399.8 294 73.8
MBI19_g27532_MAGBIO Magnolia biondii HOM05D006416 ORTHO05D008054 6.7e-109 397.9 303 70.6
CARHR055910 Cardamine hirsuta HOM05D006416 ORTHO05D008054 2.5e-108 396.0 293 74.4
Lsat_1_v5_gn_8_116020 Lactuca sativa HOM05D006416 ORTHO05D008054 3.3e-108 395.6 297 71.7
Oeu043843.1 Olea europaea HOM05D006416 ORTHO05D008054 4.3e-108 395.2 291 72.9
ATR0626G312 Amborella trichopoda HOM05D006416 ORTHO05D008054 7.4e-108 394.4 299 72.9
PSO170G0754 Papaver somniferum HOM05D006416 ORTHO05D008054 4.8e-107 391.7 292 73.6
Oeu032896.2 Olea europaea HOM05D006416 ORTHO05D008054 1.1e-106 390.6 292 72.3
PSO407G0317 Papaver somniferum HOM05D006416 ORTHO05D008054 3.1e-106 389.0 293 72.0
DCAR_029435 Daucus carota HOM05D006416 ORTHO05D008054 4.1e-106 388.7 242 83.9
Aqoxy2G03216 Aquilegia oxysepala HOM05D006416 ORTHO05D008054 1.2e-105 387.1 300 68.3
Dinv22903 Davidia involucrata HOM05D006416 ORTHO05D008054 3.4e-105 385.6 229 83.8
SGA_v2.0_scaffold204G41638 Striga asiatica HOM05D006416 ORTHO05D008054 1.3e-104 383.6 290 70.0
MSTRG.2929 Avicennia marina HOM05D006416 ORTHO05D008054 2.9e-104 382.5 290 70.3
Migut.H00517 Erythranthe guttata HOM05D006416 ORTHO05D008054 6.5e-104 381.3 293 70.0
CSS0022908 Camellia sinensis var. sinensis HOM05D006416 ORTHO05D008054 7.2e-103 377.9 295 70.8
ECA232G3707 Erigeron canadensis HOM05D006416 ORTHO05D008054 1.2e-102 377.1 236 80.1
HanXRQChr09g0258731 Helianthus annuus HOM05D006416 ORTHO05D008054 2.1e-102 376.3 295 70.5
HanXRQChr15g0486581 Helianthus annuus HOM05D006416 ORTHO05D008054 2.7e-102 375.9 290 69.3
CDE08G0960 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 6.1e-102 374.8 301 69.1
CDE02G0677 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 1.5e-100 370.2 301 67.4
unitig_899.g15132 Utricularia gibba HOM05D000909 ORTHO05D000928 7.4e-100 367.9 272 70.6
HPP92_006953 Vanilla planifolia HOM05D006416 ORTHO05D008054 9.7e-100 367.5 292 67.8
SalBow1G1453 Salvia bowleyana HOM05D006416 ORTHO05D008054 1.8e-98 363.2 225 82.2
Os05g0401100 Oryza sativa ssp. japonica HOM05D006416 ORTHO05D008054 1.0e-96 357.5 234 78.2
Zm00001eb346800 Zea mays HOM05D006416 ORTHO05D008054 2.2e-96 356.3 294 68.0
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.3e-91 340.5 253 70.8
Pp3c11_19220 Physcomitrium patens HOM05D006416 ORTHO05D008054 7.7e-89 331.3 279 64.2
Migut.C00218 Erythranthe guttata HOM05D006416 ORTHO05D008054 6.5e-88 328.2 205 78.5
Pp3c7_6980 Physcomitrium patens HOM05D006416 ORTHO05D008054 6.5e-88 328.2 285 62.1
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 4.2e-87 325.5 223 75.3
SEGI_37406 Sequoiadendron giganteum HOM05D006416 ORTHO05D008054 1.0e-85 320.9 298 59.7
SMO329G0005 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 7.0e-82 308.1 236 67.8
Mapoly0079s0006 Marchantia polymorpha HOM05D006416 ORTHO05D008054 1.6e-81 307.0 232 68.5
CBR_g30711 Chara braunii HOM05D006416 ORTHO05D008054 1.6e-73 280.4 226 63.3
Lalb_Chr02g0148391 Lupinus albus HOM05D006416 ORTHO05D008054 7.7e-73 278.1 214 72.0
SMO353G0282 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 2.2e-72 276.6 203 66.5
Aa31LG1G5580 Aethionema arabicum HOM05D006416 ORTHO05D008054 2.8e-62 243.0 137 86.9
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 2.0e-57 226.9 146 77.4
Cre03.g182150 Chlamydomonas reinhardtii HOM05D006416 ORTHO05D008054 2.4e-50 203.4 225 44.9
MCO01G659 Micromonas commoda HOM05D006416 ORTHO05D008054 4.3e-47 192.6 210 47.6
PRCOL_00003436 Prasinoderma coloniale HOM05D006416 ORTHO05D008054 9.5e-39 164.9 222 41.4
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea HOM05D006416 ORTHO05D008054 1.3e-35 154.5 86 86.0
Dinv23978 Davidia involucrata HOM05D006416 ORTHO05D008054 2.2e-35 153.7 89 87.6
Lalb_Chr02g0148401 Lupinus albus HOM05D006416 ORTHO05D008054 2.3e-32 143.7 83 85.5
Haze_01725 Corylus avellana HOM05D006416 ORTHO05D008054 3.2e-26 123.2 64 89.1
AUR62000865 Chenopodium quinoa HOM05D006416 ORTHO05D008054 3.4e-12 76.6 79 60.8


User provided reference genes

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