Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.7e-195 683.3 317 100.0
FvH4_6g38540 Fragaria vesca HOM05D006732 ORTHO05D005682 3.1e-160 568.5 317 86.1
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-153 546.6 287 91.6
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.3e-76 290.8 341 50.7
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.8e-67 260.4 334 47.3
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 6.9e-67 258.5 333 47.4
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-66 257.3 344 46.2
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 7.4e-61 238.4 345 42.9
FvH4_1g03730 Fragaria vesca HOM05D006732 ORTHO05D005682 2.4e-51 206.8 264 45.8
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.9e-49 199.9 341 38.4
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.7e-47 192.6 338 37.0
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.7e-47 192.6 338 37.0
FAN26G1044 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.7e-47 192.6 326 39.0
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.1e-47 192.2 337 37.7
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-46 191.4 339 37.8
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.9e-46 189.5 327 38.2
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 5.2e-46 189.1 345 37.7
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.2e-46 189.1 337 37.7
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 6.7e-46 188.7 341 39.3
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.8e-46 188.3 344 37.5
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-45 187.6 345 37.7
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 4.4e-45 186.0 345 37.1
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.7e-45 185.7 345 37.4
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 9.7e-45 184.9 355 38.0
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 2.2e-44 183.7 344 38.4
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 3.7e-44 183.0 345 37.4
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.3e-44 182.2 335 37.3
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 1.8e-43 180.6 345 37.4
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-42 177.9 255 44.7
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-42 177.6 336 36.9
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 5.9e-42 175.6 346 38.2
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.9e-42 175.6 338 36.4
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-41 174.5 346 37.9
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-41 174.1 348 37.1
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-40 171.0 314 41.7
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 1.9e-40 170.6 345 37.1
FAN19G1213 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-40 170.2 324 37.0
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 4.2e-40 169.5 337 37.1
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.2e-40 168.7 331 39.9
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.2e-40 168.7 331 39.9
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 2.7e-39 166.8 346 36.1
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 2.7e-39 166.8 346 36.7
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-38 164.9 327 40.4
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-38 164.5 331 39.9
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 3.3e-37 159.8 309 37.5
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-35 152.9 320 36.2
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-34 151.4 338 35.2
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-34 151.0 334 34.7
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-33 147.9 336 35.1
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.7e-31 139.4 336 33.3
FAN23G1684 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-30 137.5 180 42.8
FAN23G1741 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.8e-30 135.6 317 34.4
FAN28G1694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.8e-30 135.6 162 49.4
FvH4_1g03530 Fragaria vesca HOM05D006732 ORTHO05D005682 5.7e-29 132.5 161 49.1
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.7e-28 129.8 337 32.3
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 8.3e-28 128.6 258 37.2
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.3e-28 128.6 231 42.0
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.3e-28 128.6 258 37.2
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-27 127.1 133 54.1
FAN19G1906 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.1e-27 125.2 140 50.0
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-26 124.8 258 36.4
FAN26G2691 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.5e-26 123.2 196 36.7
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 6.5e-25 119.0 291 34.4
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-24 117.1 333 30.3
RcHm_v2.0_Chr2g0090141 Rosa chinensis HOM05D006732 ORTHO05D005682 1.0e-22 111.7 160 39.4
FAN28G0011 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.8e-22 109.0 248 34.3
FvH4_5g09163 Fragaria vesca HOM05D006732 ORTHO05D005682 1.2e-21 108.2 231 35.9
FvH4_1g04850 Fragaria vesca HOM05D006732 ORTHO05D005682 3.4e-21 106.7 175 39.4
FAN26G0550 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.5e-21 105.5 188 35.1
FAN12G0204 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-20 103.6 101 53.5
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 6.3e-20 102.4 286 31.5
FAN23G0993 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-19 100.9 160 35.6
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 3.1e-19 100.1 130 46.9
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-18 97.8 257 33.9
FAN26G3385 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.5e-18 96.3 141 44.7
RcHm_v2.0_Chr2g0089871 Rosa chinensis HOM05D006732 ORTHO05D005682 1.7e-17 94.4 124 40.3
FvH4_1g04991 Fragaria vesca HOM05D006732 ORTHO05D005682 2.9e-17 93.6 91 56.0
RcHm_v2.0_Chr1g0380941 Rosa chinensis HOM05D006732 ORTHO05D005682 2.9e-17 93.6 353 29.2
FvH4_4g06201 Fragaria vesca HOM05D006732 ORTHO05D005682 1.5e-16 91.3 100 53.0
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 3.3e-16 90.1 206 36.4
FvH4_3g44180 Fragaria vesca HOM05D031336 ORTHO05D029596 3.6e-15 86.7 365 26.8
FAN11G3653 Fragaria x ananassa HOM05D031336 ORTHO05D029596 3.6e-15 86.7 365 26.8
FAN28G2349 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.7e-15 86.3 115 50.4
FAN28G2648 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.7e-15 86.3 115 50.4
FAN19G1354 Fragaria x ananassa HOM05D006732 ORTHO05D035266 8.9e-14 82.0 109 48.6
FvH4_1g07301 Fragaria vesca HOM05D006732 ORTHO05D005682 1.5e-13 81.3 102 38.2
RcHm_v2.0_Chr1g0379901 Rosa chinensis HOM05D008398 ORTHO05D005682 2.0e-13 80.9 274 32.1
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 1.7e-12 77.8 258 28.7
RcHm_v2.0_Chr1g0379941 Rosa chinensis HOM05D008398 ORTHO05D005682 2.9e-12 77.0 276 31.2
RcHm_v2.0_Chr1g0337131 Rosa chinensis HOM05D006732 ORTHO05D012678 4.9e-12 76.3 204 30.4
FvH4_7g31670 Fragaria vesca HOM05D010677 ORTHO05D012678 8.3e-12 75.5 287 28.2
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 8.3e-12 75.5 215 32.6
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 4.1e-11 73.2 266 28.9
FvH4_7g31682 Fragaria vesca HOM05D010677 ORTHO05D012678 5.4e-11 72.8 288 28.5
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.0e-11 72.4 211 32.7
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-10 70.9 142 38.0
FAN26G3406 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.8e-10 68.9 202 28.2
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 1.0e-09 68.6 120 38.3
FAN03G1932 Fragaria x ananassa HOM05D018501 ORTHO05D020617 2.3e-09 67.4 329 27.1
FvH4_4g06202 Fragaria vesca HOM05D006732 ORTHO05D005682 3.0e-09 67.0 55 56.4
FAN23G1373 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.0e-09 67.0 86 41.9
RcHm_v2.0_Chr5g0043731 Rosa chinensis HOM05D018501 ORTHO05D020617 1.1e-08 65.1 286 27.3
Dinv24224 Davidia involucrata HOM05D015193 ORTHO05D005682 1.5e-08 64.7 128 38.3
FAN08G2174 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-08 64.7 97 36.1
FAN23G2570 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-08 64.3 75 38.7
FAN03G3389 Fragaria x ananassa HOM05D010677 ORTHO05D012678 3.3e-08 63.5 294 25.5
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 4.3e-08 63.2 154 33.8
FAN23G1506 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.6e-08 62.8 73 38.4
FAN05G1573 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.6e-07 61.2 200 31.0
FvH4_6g28610 Fragaria vesca HOM05D008398 ORTHO05D005682 2.8e-07 60.5 183 31.7
FAN03G0822 Fragaria x ananassa HOM05D010677 ORTHO05D012678 6.2e-07 59.3 157 29.3
FAN21G2564 Fragaria x ananassa HOM05D031336 ORTHO05D029596 6.2e-07 59.3 304 25.0
Dinv24217 Davidia involucrata HOM05D003963 ORTHO05D004558 1.1e-06 58.5 117 36.8
FvH4_1g04520 Fragaria vesca HOM05D006732 ORTHO05D005682 2.3e-06 57.4 85 41.2
FAN28G1562 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.9e-06 55.5 65 38.5


User provided reference genes

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