Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G2282 Fragaria x ananassa HOM05D003589 ORTHO05D005170 5.3e-203 711.1 431 100.0
FvH4_6g09850 Fragaria vesca HOM05D003589 ORTHO05D005170 1.0e-198 696.8 431 98.1
FAN09G1607 Fragaria x ananassa HOM05D003589 ORTHO05D005170 2.3e-158 562.8 443 79.0
FAN05G0190 Fragaria x ananassa HOM05D003589 ORTHO05D005170 8.9e-158 560.8 443 84.0
FAN05G1200 Fragaria x ananassa HOM05D003589 ORTHO05D005170 8.9e-158 560.8 443 84.0
FAN05G4521 Fragaria x ananassa HOM05D003589 ORTHO05D005170 8.9e-158 560.8 443 84.0
FAN02G1320 Fragaria x ananassa HOM05D003589 ORTHO05D005170 9.2e-147 524.2 675 53.3
RcHm_v2.0_Chr3g0460451 Rosa chinensis HOM05D003589 ORTHO05D005170 8.4e-116 421.4 415 70.1
Prupe.6G293800 Prunus persica HOM05D003589 ORTHO05D005170 1.1e-75 288.1 428 53.5
MD04G1174800 Malus domestica HOM05D003589 ORTHO05D005170 4.7e-66 256.1 406 48.5
Thecc.04G151400 Theobroma cacao HOM05D003589 ORTHO05D005170 2.6e-56 223.8 218 56.9
Manes.09G118000 Manihot esculenta HOM05D003589 ORTHO05D005170 1.2e-53 214.9 307 46.3
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 4.5e-53 213.0 224 54.9
Dinv16976 Davidia involucrata HOM05D003589 ORTHO05D005170 1.1e-51 208.4 312 45.8
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 3.2e-51 206.8 312 45.2
Gorai.011G127100 Gossypium raimondii HOM05D003589 ORTHO05D005170 1.4e-49 201.4 415 37.8
Gohir.D10G115400 Gossypium hirsutum HOM05D003589 ORTHO05D005170 3.0e-49 200.3 416 37.7
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 3.4e-48 196.8 220 52.3
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 4.4e-48 196.4 232 52.2
TAR633G1241 Trochodendron aralioides HOM05D003589 ORTHO05D005170 1.3e-47 194.9 275 46.9
Actinidia20793 Actinidia chinensis HOM05D003589 ORTHO05D005170 1.7e-47 194.5 244 48.0
Gohir.D02G003600 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.7e-47 194.5 240 49.2
Gorai.005G004100 Gossypium raimondii HOM05D003589 ORTHO05D005170 1.7e-47 194.5 240 49.2
EL10Ac7g17103 Beta vulgaris HOM05D003589 ORTHO05D005170 1.8e-46 191.0 228 50.9
TWI77G0120 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 9.1e-46 188.7 304 43.8
Psat3g118720 Pisum sativum HOM05D003589 ORTHO05D005170 1.6e-45 188.0 256 44.1
TWI74G0182 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 2.0e-45 187.6 307 42.0
Gohir.A10G150900 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.7e-45 187.2 426 38.3
MD12G1188500 Malus domestica HOM05D003589 ORTHO05D005170 7.7e-45 185.7 419 37.9
Gohir.A02G003200 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.9e-44 183.7 315 42.5
Potri.016G136900 Populus trichocarpa HOM05D003589 ORTHO05D005170 6.6e-44 182.6 255 42.4
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 2.5e-43 180.6 224 48.7
Potri.006G108400 Populus trichocarpa HOM05D003589 ORTHO05D005170 7.2e-43 179.1 247 43.3
QL07p032102 Quercus lobata HOM05D003589 ORTHO05D005170 1.2e-42 178.3 429 37.5
Nitab4.5_0004433g0040 Nicotiana tabacum HOM05D003589 ORTHO05D005170 2.1e-42 177.6 251 45.0
Lj1g0021012 Lotus japonicus HOM05D003589 ORTHO05D005170 2.8e-42 177.2 232 47.4
THA.LOC104806162 Tarenaya hassleriana HOM05D003589 ORTHO05D005170 3.6e-42 176.8 372 39.8
DCAR_028921 Daucus carota HOM05D003589 ORTHO05D005170 1.0e-41 175.3 219 50.2
Sopen09g009460 Solanum pennellii HOM05D003589 ORTHO05D005170 1.4e-41 174.9 257 43.6
ClCG10G022760 Citrullus lanatus HOM05D003589 ORTHO05D005170 1.8e-41 174.5 242 49.2
Cfa017032 Carpinus fangiana HOM05D003589 ORTHO05D005170 2.3e-41 174.1 258 48.1
PGR031G3776 Punica granatum HOM05D003589 ORTHO05D005170 3.0e-41 173.7 222 48.2
Eucgr.A00727 Eucalyptus grandis HOM05D003589 ORTHO05D005170 4.0e-41 173.3 263 43.3
TAR369G0333 Trochodendron aralioides HOM05D003589 ORTHO05D005170 4.0e-41 173.3 270 40.7
PGSC0003DMG400026790 Solanum tuberosum HOM05D003589 ORTHO05D005170 8.9e-41 172.2 256 44.1
Phvul.008G082600 Phaseolus vulgaris HOM05D003589 ORTHO05D005170 1.2e-40 171.8 240 45.4
Carub.0005s1794 Capsella rubella HOM05D003589 ORTHO05D005170 2.0e-40 171.0 268 45.9
Nitab4.5_0000048g0030 Nicotiana tabacum HOM05D003589 ORTHO05D005170 2.0e-40 171.0 222 46.4
Haze_21177 Corylus avellana HOM05D003589 ORTHO05D005170 3.4e-40 170.2 194 56.7
Sed0028030 Sechium edule HOM05D003589 ORTHO05D005170 4.4e-40 169.9 140 65.7
Peaxi162Scf00732g00259 Petunia axillaris HOM05D003589 ORTHO05D005170 7.5e-40 169.1 213 48.4
COL.COLO4_06483 Corchorus olitorius HOM05D003589 ORTHO05D005170 1.3e-39 168.3 192 52.6
Solyc09g015530.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 1.3e-39 168.3 257 43.6
Medtr7g073280 Medicago truncatula HOM05D003589 ORTHO05D005170 1.7e-39 167.9 238 46.6
AT3G51580 Arabidopsis thaliana HOM05D003589 ORTHO05D005170 2.9e-39 167.2 415 34.5
Sc20g0006980 Simmondsia chinensis HOM05D003589 ORTHO05D005170 2.9e-39 167.2 223 45.7
GSVIVG01030180001 Vitis vinifera HOM05D003589 ORTHO05D005170 4.9e-39 166.4 254 42.9
Cpa.g.sc86.55 Carica papaya HOM05D003589 ORTHO05D005170 8.3e-39 165.6 186 51.6
Lalb_Chr01g0023761 Lupinus albus HOM05D003589 ORTHO05D005170 8.3e-39 165.6 209 47.4
C07p46370 Brassica napus HOM05D003589 ORTHO05D005170 1.1e-38 165.2 263 44.1
TPR.G14123 Trifolium pratense HOM05D003589 ORTHO05D005170 1.1e-38 165.2 193 50.8
arahy.Tifrunner.gnm1.ann1.IRJT2S Arachis hypogaea HOM05D003589 ORTHO05D005170 1.8e-38 164.5 200 47.5
arahy.Tifrunner.gnm1.ann1.US8I5D Arachis hypogaea HOM05D003589 ORTHO05D005170 1.8e-38 164.5 242 43.4
Glyma.18G213700 Glycine max HOM05D003589 ORTHO05D005170 4.1e-38 163.3 313 42.5
AL5G32020 Arabidopsis lyrata HOM05D003589 ORTHO05D005170 7.0e-38 162.5 406 36.2
Glyma.09G274700 Glycine max HOM05D003589 ORTHO05D005170 9.2e-38 162.2 232 44.8
A03p48340 Brassica napus HOM05D003589 ORTHO05D005170 1.2e-37 161.8 293 39.9
Ah.15g090010 Amaranthus hybridus HOM05D003589 ORTHO05D005170 1.6e-37 161.4 225 46.7
vmacro08941 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 1.6e-37 161.4 264 42.4
CARHR161170 Cardamine hirsuta HOM05D003589 ORTHO05D005170 2.7e-37 160.6 226 45.1
MSTRG.5498 Avicennia marina HOM05D003589 ORTHO05D005170 3.5e-37 160.2 252 39.3
CiPaw.09G221500 Carya illinoinensis HOM05D003589 ORTHO05D005170 3.5e-37 160.2 209 49.8
Hund03699 Selenicereus undatus HOM05D003589 ORTHO05D005170 3.5e-37 160.2 365 36.2
Thhalv10010441m.g Eutrema salsugineum HOM05D003589 ORTHO05D005170 4.6e-37 159.8 420 35.7
BolC7t45155H Brassica oleracea HOM05D003589 ORTHO05D005170 3.9e-36 156.8 265 43.4
Ca_02266_v3 Cicer arietinum L. HOM05D003589 ORTHO05D005170 1.1e-35 155.2 164 54.3
Rhsim04G0121600 Rhododendron simsii HOM05D003589 ORTHO05D005170 1.1e-35 155.2 184 48.4
Nn5g26845 Nelumbo nucifera HOM05D003589 ORTHO05D005170 1.9e-35 154.5 282 42.2
Migut.J00036 Erythranthe guttata HOM05D003589 ORTHO05D005170 2.5e-35 154.1 264 39.4
Dinv34487 Davidia involucrata HOM05D003589 ORTHO05D005170 5.6e-35 152.9 265 43.4
AUR62006418 Chenopodium quinoa HOM05D003589 ORTHO05D005170 7.3e-35 152.5 332 36.7
SalBow5G3966 Salvia bowleyana HOM05D003589 ORTHO05D005170 4.7e-34 149.8 255 40.8
MBI15_g01602_MAGBIO Magnolia biondii HOM05D003589 ORTHO05D005170 6.2e-34 149.4 331 35.3
VMungo1383G2329 Vigna mungo HOM05D003589 ORTHO05D005170 1.4e-33 148.3 297 37.4
BraA03t13942Z Brassica rapa HOM05D003589 ORTHO05D005170 1.8e-33 147.9 252 42.1
Sabra06G0084600 Salix brachista HOM05D003589 ORTHO05D005170 1.8e-33 147.9 142 54.2
Sabra04G0153600 Salix brachista HOM05D003589 ORTHO05D005170 4.0e-33 146.7 184 46.2
BcaC06g33027 Brassica carinata HOM05D003589 ORTHO05D005170 1.2e-32 145.2 253 41.5
CSS0028706 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 3.4e-32 143.7 195 46.7
PSO170G6362 Papaver somniferum HOM05D003589 ORTHO05D005170 4.4e-32 143.3 230 43.0
AUR62029766 Chenopodium quinoa HOM05D003589 ORTHO05D005170 9.8e-32 142.1 284 38.0
Aa31LG1G13800 Aethionema arabicum HOM05D003589 ORTHO05D005170 4.9e-31 139.8 306 36.3
CANSAT56G1879 Cannabis sativa HOM05D003589 ORTHO05D005170 3.2e-30 137.1 281 34.9
Sp5g10690 Schrenkiella parvula HOM05D003589 ORTHO05D005170 9.2e-30 135.6 401 38.2
Oeu057998.1 Olea europaea HOM05D003589 ORTHO05D005170 2.0e-29 134.4 150 48.0
Manes.08G171100 Manihot esculenta HOM05D003589 ORTHO05D005170 2.7e-29 134.0 238 37.8
Ciclev10032400m.g Citrus clementina HOM05D003589 ORTHO05D005170 4.6e-29 133.3 242 38.4
Actinidia31628 Actinidia chinensis HOM05D003589 ORTHO05D005170 3.0e-28 130.6 231 38.5
CSS0030619 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 3.9e-28 130.2 193 45.1
ECA247G3378 Erigeron canadensis HOM05D000259 ORTHO05D000155 3.3e-27 127.1 130 52.3
HPP92_015592 Vanilla planifolia HOM05D003589 ORTHO05D005170 4.3e-27 126.7 321 32.4
Eucgr.G03139 Eucalyptus grandis HOM05D003589 ORTHO05D005170 1.6e-26 124.8 260 35.4
Hma1.2p1_0264F.1_g106130 Hydrangea macrophylla HOM05D003589 ORTHO05D005170 6.2e-26 122.9 247 40.5
SGA_v2.0_scaffold85G26610 Striga asiatica HOM05D003589 ORTHO05D005170 8.1e-26 122.5 312 30.1
CsaV3_6G002320 Cucumis sativus L. HOM05D003589 ORTHO05D005170 1.8e-25 121.3 217 34.1
Manes.10G001600 Manihot esculenta HOM05D003589 ORTHO05D005170 2.3e-25 120.9 223 34.5
MELO3C020009.2 Cucumis melo HOM05D003589 ORTHO05D005170 8.9e-25 119.0 254 30.3
Sed0000653 Sechium edule HOM05D003589 ORTHO05D005170 2.6e-24 117.5 262 30.9
ClCG11G005660 Citrullus lanatus HOM05D003589 ORTHO05D005170 8.3e-23 112.5 219 32.0
vmacro06893 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 8.3e-23 112.5 243 34.6
PGR142G3587 Punica granatum HOM05D003589 ORTHO05D005170 1.1e-22 112.1 245 37.6
HanXRQChr10g0287531 Helianthus annuus HOM05D003589 ORTHO05D005170 1.9e-22 111.3 397 27.7
Lj8A54T74 Lonicera japonica HOM05D003589 ORTHO05D005170 2.4e-22 110.9 231 38.1
Duzib114G0452 Durio zibethinus HOM05D003589 ORTHO05D005170 3.2e-22 110.5 218 35.3
Cc02_g05350 Coffea canephora HOM05D003589 ORTHO05D005170 1.2e-21 108.6 222 38.7
Rhsim03G0152700 Rhododendron simsii HOM05D003589 ORTHO05D005170 2.1e-21 107.8 182 40.7
Peaxi162Scf00167g01218 Petunia axillaris HOM05D003589 ORTHO05D005170 3.5e-21 107.1 234 34.6
Rhsim03G0152300 Rhododendron simsii HOM05D003589 ORTHO05D005170 4.6e-21 106.7 182 40.7
GSVIVG01032671001 Vitis vinifera HOM05D003589 ORTHO05D005170 1.3e-20 105.1 262 32.4
Migut.F01242 Erythranthe guttata HOM05D003589 ORTHO05D005170 1.7e-20 104.8 234 32.5
ATR1127G101 Amborella trichopoda HOM05D003589 ORTHO05D005170 3.0e-20 104.0 229 32.8
Cpa.g.sc19.55 Carica papaya HOM05D003589 ORTHO05D005170 3.9e-20 103.6 200 35.5
Nitab4.5_0002279g0060 Nicotiana tabacum HOM05D003589 ORTHO05D005170 1.5e-19 101.7 237 35.9
Lsat_1_v5_gn_9_38921 Lactuca sativa HOM05D003589 ORTHO05D005170 4.3e-19 100.1 116 46.6
Sopen05g030750 Solanum pennellii HOM05D003589 ORTHO05D005170 4.3e-19 100.1 203 37.4
PGSC0003DMG400011643 Solanum tuberosum HOM05D003589 ORTHO05D005170 9.5e-19 99.0 203 36.9
MSTRG.169 Avicennia marina HOM05D003589 ORTHO05D005170 1.6e-18 98.2 235 34.5
Potri.019G058400 Populus trichocarpa HOM05D003589 ORTHO05D005170 2.8e-18 97.4 206 35.9
Nitab4.5_0000375g0230 Nicotiana tabacum HOM05D003589 ORTHO05D005170 4.7e-18 96.7 235 34.9
Solyc05g052210.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 8.1e-18 95.9 196 37.2
Thecc.10G179400 Theobroma cacao HOM05D003589 ORTHO05D005170 1.4e-17 95.1 177 34.5
DCAR_018039 Daucus carota HOM05D003589 ORTHO05D005170 4.0e-17 93.6 241 30.3
Oeu006056.1 Olea europaea HOM05D003589 ORTHO05D005170 2.9e-15 87.4 180 37.8
CiPaw.12G083800 Carya illinoinensis HOM05D007666 ORTHO05D009567 4.9e-15 86.7 268 29.1
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 1.9e-14 84.7 198 33.3
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 1.9e-14 84.7 232 28.9
Potri.001G092300 Populus trichocarpa HOM05D007666 ORTHO05D009567 9.2e-14 82.4 224 32.6
Gohir.A05G402800 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.1e-13 81.3 212 30.2
Oeu060212.1 Olea europaea HOM05D003589 ORTHO05D005170 2.1e-13 81.3 101 48.5
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 3.5e-13 80.5 225 29.3
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 4.6e-13 80.1 255 26.7
MSTRG.25667 Avicennia marina HOM05D007666 ORTHO05D009567 1.3e-12 78.6 236 28.0
unitig_578.g15914 Utricularia gibba HOM05D003589 ORTHO05D005170 1.3e-12 78.6 294 26.5
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 2.3e-12 77.8 256 32.4
CDE04G2629 Ceratophyllum demersum HOM05D003589 ORTHO05D005170 2.3e-12 77.8 320 29.4
COL.COLO4_19418 Corchorus olitorius HOM05D003589 ORTHO05D005170 3.9e-12 77.0 177 31.1
ECA238G2532 Erigeron canadensis HOM05D003589 ORTHO05D005170 6.6e-12 76.3 220 31.4
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 1.5e-11 75.1 244 26.6
Lsat_1_v5_gn_2_126280 Lactuca sativa HOM05D003589 ORTHO05D005170 2.5e-11 74.3 223 27.8
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 2.5e-11 74.3 241 24.9
Sabra19G0073800 Salix brachista HOM05D003589 ORTHO05D005170 2.5e-11 74.3 208 33.2
PSO384G2287 Papaver somniferum HOM05D007666 ORTHO05D009567 3.3e-11 73.9 250 26.8
Nitab4.5_0005537g0030 Nicotiana tabacum HOM05D007666 ORTHO05D009567 9.6e-11 72.4 219 28.3
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 1.6e-10 71.6 223 30.0
Nitab4.5_0001231g0060 Nicotiana tabacum HOM05D007666 ORTHO05D009567 1.6e-10 71.6 219 27.9
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 2.8e-10 70.9 241 26.1
HanXRQChr07g0204121 Helianthus annuus HOM05D003589 ORTHO05D005170 6.2e-10 69.7 229 31.0
CiPaw.11G122000 Carya illinoinensis HOM05D007666 ORTHO05D009567 8.1e-10 69.3 217 27.2
Oeu044185.1 Olea europaea HOM05D003589 ORTHO05D005170 1.1e-09 68.9 99 38.4
Pp3c1_25250 Physcomitrium patens HOM05D029953 ORTHO05D005170 2.6e-08 64.3 272 23.9
CDE04G3060 Ceratophyllum demersum HOM05D003589 ORTHO05D005170 7.6e-08 62.8 323 27.2
MD06G1105600 Malus domestica HOM05D007666 ORTHO05D009567 3.8e-07 60.5 316 25.3
ECA246G0366 Erigeron canadensis HOM05D007666 ORTHO05D009567 1.1e-06 58.9 315 27.6
C01p29000 Brassica napus HOM05D003589 ORTHO05D005170 5.4e-06 56.6 118 40.7
BolC1t02831H Brassica oleracea HOM05D003589 ORTHO05D005170 5.4e-06 56.6 118 40.7


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