Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G2238 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.6e-68 262.7 139 100.0
FvH4_6g40672 Fragaria vesca HOM05D003121 ORTHO05D003535 5.4e-56 221.1 139 88.5
FvH4_6g40673 Fragaria vesca HOM05D003121 ORTHO05D003535 5.1e-30 134.8 102 72.5
FAN14G5171 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.1e-29 133.7 102 71.6
FvH4_2g26761 Fragaria vesca HOM05D003121 ORTHO05D003535 9.5e-29 130.6 87 74.7
FAN05G2449 Fragaria x ananassa HOM05D003121 ORTHO05D210508 3.6e-28 128.6 110 65.5
FvH4_3g23920 Fragaria vesca HOM05D003121 ORTHO05D003535 8.4e-25 117.5 106 65.1
FAN11G2297 Fragaria x ananassa HOM05D003121 ORTHO05D003535 8.4e-25 117.5 106 65.1
FAN02G1177 Fragaria x ananassa HOM05D003121 ORTHO05D003535 2.1e-12 76.3 95 50.5
FAN09G3405 Fragaria x ananassa HOM05D003121 ORTHO05D003535 2.8e-12 75.9 69 63.8
FvH4_6g03710 Fragaria vesca HOM05D003121 ORTHO05D003535 3.6e-12 75.5 69 62.3
FvH4_6g03220 Fragaria vesca HOM05D003121 ORTHO05D003535 4.8e-12 75.1 66 60.6
FAN05G0168 Fragaria x ananassa HOM05D003121 ORTHO05D003535 8.1e-12 74.3 69 62.3
EL10Ac6g13967 Beta vulgaris HOM05D003121 ORTHO05D003535 5.3e-11 71.6 65 58.5
FvH4_6g03780 Fragaria vesca HOM05D003121 ORTHO05D003535 5.3e-11 71.6 69 59.4
FAN14G4574 Fragaria x ananassa HOM05D003121 ORTHO05D003535 5.3e-11 71.6 69 59.4
FAN05G5388 Fragaria x ananassa HOM05D003121 ORTHO05D003535 6.9e-11 71.2 69 59.4
AUR62010012 Chenopodium quinoa HOM05D003121 ORTHO05D003535 9.0e-11 70.9 65 55.4
AUR62013002 Chenopodium quinoa HOM05D003121 ORTHO05D003535 9.0e-11 70.9 65 55.4
AUR62015153 Chenopodium quinoa HOM05D003121 ORTHO05D003535 9.0e-11 70.9 65 55.4
FvH4_3g06550 Fragaria vesca HOM05D003121 ORTHO05D003535 2.6e-10 69.3 99 45.5
FAN09G3057 Fragaria x ananassa HOM05D003121 ORTHO05D003535 2.6e-10 69.3 69 58.0
FAN11G3129 Fragaria x ananassa HOM05D003121 ORTHO05D003535 2.6e-10 69.3 66 57.6
TAR376G0768 Trochodendron aralioides HOM05D003121 ORTHO05D003535 2.6e-10 69.3 65 55.4
EL10Ac9g21341 Beta vulgaris HOM05D003121 ORTHO05D003535 4.4e-10 68.6 65 56.9
PGR042G3155 Punica granatum HOM05D003121 ORTHO05D003535 5.8e-10 68.2 65 56.9
TAR625G0403 Trochodendron aralioides HOM05D003121 ORTHO05D003535 5.8e-10 68.2 65 55.4
FAN21G0422 Fragaria x ananassa HOM05D003121 ORTHO05D003535 9.9e-10 67.4 66 56.1
Eucgr.G01791 Eucalyptus grandis HOM05D003121 ORTHO05D003535 1.3e-09 67.0 82 48.8
PSO541G2003 Papaver somniferum HOM05D003121 ORTHO05D003535 1.7e-09 66.6 65 55.4
PSO675G0341 Papaver somniferum HOM05D003121 ORTHO05D003535 1.7e-09 66.6 65 55.4
RcHm_v2.0_Chr6g0278841 Rosa chinensis HOM05D003121 ORTHO05D003535 2.9e-09 65.9 65 58.5
GSVIVG01037045001 Vitis vinifera HOM05D003121 ORTHO05D003535 2.9e-09 65.9 65 55.4
Ah.01g023230 Amaranthus hybridus HOM05D003121 ORTHO05D003535 3.8e-09 65.5 64 56.2
Nn5g27768 Nelumbo nucifera HOM05D003121 ORTHO05D003535 3.8e-09 65.5 65 53.8
CDE09G1210 Ceratophyllum demersum HOM05D003121 ORTHO05D003535 4.9e-09 65.1 65 53.8
Lj5P177T42 Lonicera japonica HOM05D003121 ORTHO05D003535 4.9e-09 65.1 65 52.3
AUR62010208 Chenopodium quinoa HOM05D003121 ORTHO05D003535 6.4e-09 64.7 61 55.7
Dinv41919 Davidia involucrata HOM05D003121 ORTHO05D003535 6.4e-09 64.7 65 53.8
FAN14G3468 Fragaria x ananassa HOM05D003121 ORTHO05D003535 6.4e-09 64.7 68 58.8
Hund00013 Selenicereus undatus HOM05D003121 ORTHO05D003535 6.4e-09 64.7 65 55.4
ClCG02G003910 Citrullus lanatus HOM05D003121 ORTHO05D003535 8.4e-09 64.3 65 53.8
MELO3C013333.2 Cucumis melo HOM05D003121 ORTHO05D003535 8.4e-09 64.3 65 53.8
CsaV3_7G001220 Cucumis sativus L. HOM05D003121 ORTHO05D003535 8.4e-09 64.3 65 53.8
Sed0021457 Sechium edule HOM05D003121 ORTHO05D003535 8.4e-09 64.3 65 55.4
VMungo0720G1452 Vigna mungo HOM05D003121 ORTHO05D003535 8.4e-09 64.3 65 55.4
CANSAT78G0282 Cannabis sativa HOM05D003121 ORTHO05D003535 1.1e-08 63.9 80 46.2
Sed0012540 Sechium edule HOM05D003121 ORTHO05D003535 1.1e-08 63.9 65 55.4
CANSAT25G2722 Cannabis sativa HOM05D003121 ORTHO05D003535 1.4e-08 63.5 80 46.2
CDE02G2638 Ceratophyllum demersum HOM05D003121 ORTHO05D003535 1.4e-08 63.5 65 52.3
FAN07G2467 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.4e-08 63.5 59 62.7
Glyma.20G106400 Glycine max HOM05D003121 ORTHO05D003535 1.4e-08 63.5 80 47.5
Hma1.2p1_0032F.1_g019220 Hydrangea macrophylla HOM05D003121 ORTHO05D003535 1.4e-08 63.5 66 53.0
Lsat_1_v5_gn_4_72000 Lactuca sativa HOM05D003121 ORTHO05D003535 1.4e-08 63.5 78 46.2
PSO210G5475 Papaver somniferum HOM05D003121 ORTHO05D003535 1.4e-08 63.5 69 52.2
Sc14g0002330 Simmondsia chinensis HOM05D003121 ORTHO05D003535 1.4e-08 63.5 65 53.8
THA.LOC104819658 Tarenaya hassleriana HOM05D003121 ORTHO05D003535 1.4e-08 63.5 65 53.8
ECA234G0462 Erigeron canadensis HOM05D003121 ORTHO05D003535 1.9e-08 63.2 77 48.1
Thhalv10004704m.g Eutrema salsugineum HOM05D003121 ORTHO05D003535 1.9e-08 63.2 65 53.8
AT5G23590 Arabidopsis thaliana HOM05D003121 ORTHO05D003535 2.4e-08 62.8 65 53.8
Cpa.g.sc14.232 Carica papaya HOM05D003121 ORTHO05D003535 2.4e-08 62.8 65 52.3
DCAR_022799 Daucus carota HOM05D003121 ORTHO05D003535 2.4e-08 62.8 65 52.3
A06p34540 Brassica napus HOM05D000059 ORTHO05D003535 3.2e-08 62.4 65 52.3
BraA06t26383Z Brassica rapa HOM05D003121 ORTHO05D003535 3.2e-08 62.4 65 52.3
Ciclev10030221m.g Citrus clementina HOM05D003121 ORTHO05D003535 3.2e-08 62.4 65 53.8
PSO732G0110 Papaver somniferum HOM05D003121 ORTHO05D003535 3.2e-08 62.4 66 56.1
C07p43950 Brassica napus HOM05D003121 ORTHO05D003535 4.2e-08 62.0 65 52.3
BolC7t44923H Brassica oleracea HOM05D003121 ORTHO05D003535 4.2e-08 62.0 65 52.3
Cc09_g10310 Coffea canephora HOM05D003121 ORTHO05D003535 5.4e-08 61.6 65 52.3
PSO675G3506 Papaver somniferum HOM05D003121 ORTHO05D003535 5.4e-08 61.6 66 56.1
Phvul.007G017900 Phaseolus vulgaris HOM05D003121 ORTHO05D003535 5.4e-08 61.6 65 52.3
Sp2g23600 Schrenkiella parvula HOM05D003121 ORTHO05D003535 7.1e-08 61.2 65 52.3
TWI60G0855 Tripterygium wilfordii HOM05D003121 ORTHO05D003535 7.1e-08 61.2 65 50.8
PSO223G0054 Papaver somniferum HOM05D003121 ORTHO05D003535 9.3e-08 60.8 65 52.3
arahy.Tifrunner.gnm1.ann1.LP37DI Arachis hypogaea HOM05D003121 ORTHO05D003535 1.2e-07 60.5 65 52.3
arahy.Tifrunner.gnm1.ann1.TJ1SRC Arachis hypogaea HOM05D003121 ORTHO05D003535 1.2e-07 60.5 65 52.3
HanXRQChr10g0298091 Helianthus annuus HOM05D003121 ORTHO05D003535 1.2e-07 60.5 78 44.9
Medtr1g112910 Medicago truncatula HOM05D003121 ORTHO05D003535 1.2e-07 60.5 65 49.2
Peaxi162Scf00793g00345 Petunia axillaris HOM05D003121 ORTHO05D003535 1.2e-07 60.5 65 50.8
MSTRG.27630 Avicennia marina HOM05D003121 ORTHO05D003535 1.6e-07 60.1 65 49.2
ECA236G3931 Erigeron canadensis HOM05D003121 ORTHO05D003535 1.6e-07 60.1 63 52.4
FAN13G2513 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.6e-07 60.1 67 49.3
PSO223G0083 Papaver somniferum HOM05D003121 ORTHO05D003535 1.6e-07 60.1 65 52.3
Solyc01g088730.3 Solanum lycopersicum HOM05D003121 ORTHO05D003535 1.6e-07 60.1 64 50.0
SGA_v2.0_scaffold195G40810 Striga asiatica HOM05D003121 ORTHO05D003535 1.6e-07 60.1 65 47.7
Hma1.2p1_0163F.1_g072700 Hydrangea macrophylla HOM05D003121 ORTHO05D003535 2.1e-07 59.7 65 52.3
CANSAT80G1118 Cannabis sativa HOM05D003121 ORTHO05D003535 2.7e-07 59.3 69 50.7
DCAR_029118 Daucus carota HOM05D003121 ORTHO05D003535 2.7e-07 59.3 64 51.6
Manes.15G059200 Manihot esculenta HOM05D003121 ORTHO05D003535 2.7e-07 59.3 65 50.8
AL6G34890 Arabidopsis lyrata HOM05D003121 ORTHO05D003535 3.5e-07 58.9 65 50.8
Carub.0006s2137 Capsella rubella HOM05D003121 ORTHO05D003535 3.5e-07 58.9 65 50.8
CAN.G756.31 Capsicum annuum HOM05D003121 ORTHO05D003535 3.5e-07 58.9 65 50.8
Haze_00809 Corylus avellana HOM05D003121 ORTHO05D003535 3.5e-07 58.9 65 55.4
FAN09G1988 Fragaria x ananassa HOM05D003121 ORTHO05D003535 3.5e-07 58.9 68 57.4
Glyma.10G283300 Glycine max HOM05D003121 ORTHO05D003535 3.5e-07 58.9 65 50.8
Nitab4.5_0000563g0090 Nicotiana tabacum HOM05D003121 ORTHO05D003535 3.5e-07 58.9 65 49.2
Nitab4.5_0002341g0030 Nicotiana tabacum HOM05D003121 ORTHO05D003535 3.5e-07 58.9 65 49.2
PSO135G0399 Papaver somniferum HOM05D003121 ORTHO05D003535 3.5e-07 58.9 64 51.6
Potri.009G138100 Populus trichocarpa HOM05D003121 ORTHO05D003535 3.5e-07 58.9 65 50.8
Sopen01g035570 Solanum pennellii HOM05D003121 ORTHO05D003535 3.5e-07 58.9 64 50.0
PGSC0003DMG401001724 Solanum tuberosum HOM05D003121 ORTHO05D003535 3.5e-07 58.9 64 50.0
Aa31LG10G14410 Aethionema arabicum HOM05D003121 ORTHO05D003535 4.6e-07 58.5 65 49.2
Lalb_Chr06g0163731 Lupinus albus HOM05D003121 ORTHO05D003535 4.6e-07 58.5 65 50.8
MD05G1124900 Malus domestica HOM05D003121 ORTHO05D003535 4.6e-07 58.5 65 53.8
SHI04584 Sapria himalayana HOM05D003121 ORTHO05D003535 6.0e-07 58.2 65 49.2
CiPaw.02G071300 Carya illinoinensis HOM05D003121 ORTHO05D003535 1.0e-06 57.4 78 46.2
DCAR_020020 Daucus carota HOM05D003121 ORTHO05D003535 1.0e-06 57.4 65 49.2
FvH4_3g08280 Fragaria vesca HOM05D003121 ORTHO05D003535 1.0e-06 57.4 64 51.6
FAN11G1820 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.0e-06 57.4 64 51.6
FAN16G1234 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.0e-06 57.4 64 51.6
C02p60790 Brassica napus HOM05D003121 ORTHO05D003535 1.3e-06 57.0 68 48.5
CSS0021302 Camellia sinensis var. sinensis HOM05D003121 ORTHO05D003535 1.3e-06 57.0 65 50.8
Migut.N01332 Erythranthe guttata HOM05D003121 ORTHO05D003535 1.3e-06 57.0 65 46.2
FvH4_1g17321 Fragaria vesca HOM05D003121 ORTHO05D003535 1.3e-06 57.0 64 51.6
FAN19G1977 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.3e-06 57.0 64 51.6
Sabra09G0107000 Salix brachista HOM05D003121 ORTHO05D003535 1.3e-06 57.0 65 49.2
COL.COLO4_17374 Corchorus olitorius HOM05D003121 ORTHO05D003535 1.7e-06 56.6 65 49.2
FvH4_2g15640 Fragaria vesca HOM05D003121 ORTHO05D003535 1.7e-06 56.6 65 50.8
FAN20G1288 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.7e-06 56.6 65 50.8
FAN24G0024 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.7e-06 56.6 65 50.8
FAN28G1504 Fragaria x ananassa HOM05D003121 ORTHO05D003535 1.7e-06 56.6 97 37.1
PSO223G0032 Papaver somniferum HOM05D003121 ORTHO05D003535 1.7e-06 56.6 65 49.2
QL11p052350 Quercus lobata HOM05D003121 ORTHO05D003535 1.7e-06 56.6 65 49.2
Solyc04g015090.3 Solanum lycopersicum HOM05D003121 ORTHO05D003535 1.7e-06 56.6 65 55.4
Sopen04g007110 Solanum pennellii HOM05D003121 ORTHO05D003535 1.7e-06 56.6 65 55.4
SGA_v2.0_scaffold207G41938 Striga asiatica HOM05D003121 ORTHO05D003535 1.7e-06 56.6 65 47.7
FAN23G2561 Fragaria x ananassa HOM05D003121 ORTHO05D003535 2.3e-06 56.2 105 37.1
Gohir.A01G170400 Gossypium hirsutum HOM05D003121 ORTHO05D003535 2.3e-06 56.2 65 49.2
Gohir.D01G161400 Gossypium hirsutum HOM05D003121 ORTHO05D003535 2.3e-06 56.2 65 49.2
Gorai.002G200100 Gossypium raimondii HOM05D003121 ORTHO05D003535 2.3e-06 56.2 65 49.2
SEGI_06864 Sequoiadendron giganteum HOM05D003121 ORTHO05D003535 2.3e-06 56.2 65 44.6
PGSC0003DMG400015012 Solanum tuberosum HOM05D003121 ORTHO05D003535 2.3e-06 56.2 65 53.8
CSS0049142 Camellia sinensis var. sinensis HOM05D003121 ORTHO05D003535 3.9e-06 55.5 65 47.7
PSO339G5273 Papaver somniferum HOM05D003121 ORTHO05D003535 3.9e-06 55.5 65 47.7
PGSC0003DMG400009335 Solanum tuberosum HOM05D003121 ORTHO05D003535 3.9e-06 55.5 66 45.5
CAN.G475.3 Capsicum annuum HOM05D003121 ORTHO05D003535 5.1e-06 55.1 65 46.2
Thecc.02G055800 Theobroma cacao HOM05D003121 ORTHO05D003535 5.1e-06 55.1 65 49.2
unitig_746.g26872 Utricularia gibba HOM05D003121 ORTHO05D003535 5.1e-06 55.1 65 46.2
FAN26G0110 Fragaria x ananassa HOM05D003121 ORTHO05D003535 6.6e-06 54.7 66 47.0
Duzib052G0361 Durio zibethinus HOM05D003121 ORTHO05D003535 8.7e-06 54.3 65 49.2
FAN21G2867 Fragaria x ananassa HOM05D003121 ORTHO05D003535 8.7e-06 54.3 94 44.7
FAN26G1946 Fragaria x ananassa HOM05D003121 ORTHO05D003535 8.7e-06 54.3 64 50.0


User provided reference genes

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