Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G2093 Fragaria x ananassa HOM05D009605 ORTHO05D011175 6.8e-87 323.9 160 100.0
FvH4_6g05281 Fragaria vesca HOM05D009605 ORTHO05D011175 1.5e-86 322.8 160 99.4
FAN09G3077 Fragaria x ananassa HOM05D009605 ORTHO05D011175 5.4e-68 261.2 160 88.1
RcHm_v2.0_Chr3g0454021 Rosa chinensis HOM05D009605 ORTHO05D011175 7.3e-65 250.8 162 81.5
Prupe.6G330800 Prunus persica HOM05D009605 ORTHO05D011175 3.9e-26 122.1 153 51.0
Lj5g0016252 Lotus japonicus HOM05D009605 ORTHO05D011175 3.4e-14 82.4 175 37.7
AUR62005114 Chenopodium quinoa HOM05D021873 ORTHO05D011175 5.8e-14 81.6 169 37.9
AUR62000860 Chenopodium quinoa HOM05D021873 ORTHO05D011175 1.7e-13 80.1 169 39.1
Lalb_Chr02g0148421 Lupinus albus HOM05D009605 ORTHO05D011175 2.5e-12 76.3 126 38.9
Cfa006540 Carpinus fangiana HOM05D025019 ORTHO05D011175 5.5e-12 75.1 181 34.3
Medtr1g082370 Medicago truncatula HOM05D009605 ORTHO05D011175 7.1e-12 74.7 153 41.2
TPR.G2714 Trifolium pratense HOM05D009605 ORTHO05D011175 2.7e-11 72.8 151 37.7
Lj1g0007950 Lotus japonicus HOM05D009605 ORTHO05D011175 4.6e-11 72.0 144 36.8
Psat6g148720 Pisum sativum HOM05D009605 ORTHO05D011175 1.0e-10 70.9 153 39.9
CiPaw.08G167200 Carya illinoinensis HOM05D025019 ORTHO05D011175 6.7e-10 68.2 179 31.3
GSVIVG01022057001 Vitis vinifera HOM05D009605 ORTHO05D011175 8.7e-10 67.8 143 37.1
Glyma.03G240500 Glycine max HOM05D009605 ORTHO05D011175 1.5e-09 67.0 158 36.7
Manes.08G123350 Manihot esculenta HOM05D009605 ORTHO05D011175 1.9e-09 66.6 200 35.0
Dinv22906 Davidia involucrata HOM05D009605 ORTHO05D011175 5.7e-09 65.1 146 32.2
Sc16g0008320 Simmondsia chinensis HOM05D021873 ORTHO05D015553 7.4e-09 64.7 197 31.5
Gohir.A11G262600 Gossypium hirsutum HOM05D031076 ORTHO05D015553 9.7e-09 64.3 165 35.2
Gohir.D11G272600 Gossypium hirsutum HOM05D031076 ORTHO05D015553 2.2e-08 63.2 165 34.5
Gorai.007G293900 Gossypium raimondii HOM05D031076 ORTHO05D015553 2.2e-08 63.2 165 34.5
Aa31LG2G11420 Aethionema arabicum HOM05D013516 ORTHO05D015268 2.8e-08 62.8 143 30.1
Glyma.20G231300 Glycine max HOM05D009605 ORTHO05D011175 3.7e-08 62.4 186 33.9
Potri.005G038200 Populus trichocarpa HOM05D009605 ORTHO05D011175 6.3e-08 61.6 183 32.2
Nitab4.5_0015025g0010 Nicotiana tabacum HOM05D020669 ORTHO05D015553 8.2e-08 61.2 168 32.1
Cpa.g.sc48.5 Carica papaya HOM05D003767 ORTHO05D004507 1.4e-07 60.5 176 30.7
arahy.Tifrunner.gnm1.ann1.JJSD05 Arachis hypogaea HOM05D009605 ORTHO05D011175 1.8e-07 60.1 102 41.2
TWI12G0964 Tripterygium wilfordii HOM05D009605 ORTHO05D011175 1.8e-07 60.1 171 31.6
Nitab4.5_0004940g0120 Nicotiana tabacum HOM05D020669 ORTHO05D015553 4.1e-07 58.9 169 32.5
BcaC06g31775 Brassica carinata HOM05D013516 ORTHO05D015268 6.9e-07 58.2 142 33.1
CAN.G1134.16 Capsicum annuum HOM05D020669 ORTHO05D015553 9.0e-07 57.8 157 33.1
C04p27050 Brassica napus HOM05D013516 ORTHO05D015268 3.4e-06 55.8 134 33.6
BolC4t24088H Brassica oleracea HOM05D013516 ORTHO05D015268 3.4e-06 55.8 134 33.6
CiPaw.07G014300 Carya illinoinensis HOM05D025019 ORTHO05D011175 3.4e-06 55.8 182 31.9
Ah.06g190160 Amaranthus hybridus HOM05D021873 ORTHO05D011175 4.5e-06 55.5 154 34.4
Manes.09G163000 Manihot esculenta HOM05D009605 ORTHO05D011175 4.5e-06 55.5 145 31.0
Phvul.007G182700 Phaseolus vulgaris HOM05D009605 ORTHO05D011175 4.5e-06 55.5 180 28.3
Glyma.10G157400 Glycine max HOM05D009605 ORTHO05D011175 5.9e-06 55.1 188 32.4


User provided reference genes

Program Settings