Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G3475 Fragaria x ananassa HOM05D006899 ORTHO05D008566 1.1e-75 286.6 152 100.0
FAN14G2046 Fragaria x ananassa HOM05D006899 ORTHO05D008566 1.1e-75 286.6 152 100.0
FvH4_6g38570 Fragaria vesca HOM05D006899 ORTHO05D008566 5.1e-60 234.6 127 98.4
FAN09G4704 Fragaria x ananassa HOM05D006899 ORTHO05D008566 1.1e-59 233.4 127 98.4
FAN05G4631 Fragaria x ananassa HOM05D006899 ORTHO05D008566 3.3e-59 231.9 127 97.6
RcHm_v2.0_Chr2g0151981 Rosa chinensis HOM05D006899 ORTHO05D008566 1.8e-57 226.1 127 94.5
Prupe.3G176400 Prunus persica HOM05D006899 ORTHO05D008566 2.4e-49 199.1 124 83.9
MD17G1136600 Malus domestica HOM05D006899 ORTHO05D008566 5.3e-49 198.0 146 76.0
MD09G1149700 Malus domestica HOM05D006899 ORTHO05D008566 1.0e-47 193.7 146 74.0
Gorai.001G092300 Gossypium raimondii HOM05D006899 ORTHO05D008566 4.2e-46 188.3 125 80.8
Gohir.D07G086300 Gossypium hirsutum HOM05D006899 ORTHO05D008566 5.5e-46 188.0 125 80.0
Thecc.01G170200 Theobroma cacao HOM05D006899 ORTHO05D008566 9.4e-46 187.2 125 80.0
Rhsim04G0081600 Rhododendron simsii HOM05D006899 ORTHO05D008566 1.2e-45 186.8 125 79.2
COL.COLO4_08896 Corchorus olitorius HOM05D006899 ORTHO05D008566 2.1e-45 186.0 125 81.6
Gohir.A07G080700 Gossypium hirsutum HOM05D006899 ORTHO05D008566 2.1e-45 186.0 125 79.2
TWI59G0652 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 2.1e-45 186.0 126 78.6
GSVIVG01020847001 Vitis vinifera HOM05D006899 ORTHO05D008566 4.7e-45 184.9 124 75.8
Nitab4.5_0002251g0050 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.0e-44 183.7 126 78.6
Nitab4.5_0001883g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.3e-44 182.6 126 77.8
QL08p044873 Quercus lobata HOM05D006899 ORTHO05D008566 3.9e-44 181.8 122 78.7
VMungo0647G1903 Vigna mungo HOM05D006899 ORTHO05D008566 6.7e-44 181.0 121 79.3
Ciclev10032884m.g Citrus clementina HOM05D006899 ORTHO05D008566 8.8e-44 180.6 117 79.5
PGSC0003DMG400017304 Solanum tuberosum HOM05D006899 ORTHO05D008566 1.1e-43 180.3 126 77.0
vmacro09192 Vaccinium macrocarpon HOM05D006899 ORTHO05D008566 1.1e-43 180.3 121 78.5
Nn4g26539 Nelumbo nucifera HOM05D006899 ORTHO05D008566 2.0e-43 179.5 125 78.4
Oeu020934.1 Olea europaea HOM05D006899 ORTHO05D008566 3.3e-43 178.7 125 76.8
Haze_13530 Corylus avellana HOM05D006899 ORTHO05D008566 4.4e-43 178.3 120 79.2
Peaxi162Scf00111g00221 Petunia axillaris HOM05D006899 ORTHO05D008566 4.4e-43 178.3 122 78.7
Duzib138G0065 Durio zibethinus HOM05D006899 ORTHO05D008566 5.7e-43 177.9 118 79.7
Oeu013822.1 Olea europaea HOM05D006899 ORTHO05D008566 5.7e-43 177.9 125 76.0
Glyma.02G285100 Glycine max HOM05D006899 ORTHO05D008566 7.4e-43 177.6 124 76.6
Medtr5g091190 Medicago truncatula HOM05D006899 ORTHO05D008566 9.7e-43 177.2 121 77.7
Cpa.g.sc50.104 Carica papaya HOM05D006899 ORTHO05D008566 1.3e-42 176.8 122 77.0
Solyc07g056240.3 Solanum lycopersicum HOM05D006899 ORTHO05D008566 1.7e-42 176.4 126 74.6
Atru.chr6.2058 Acer truncatum HOM05D006899 ORTHO05D008566 2.2e-42 176.0 116 79.3
Cfa023072 Carpinus fangiana HOM05D006899 ORTHO05D008566 2.8e-42 175.6 123 77.2
Phvul.008G193700 Phaseolus vulgaris HOM05D006899 ORTHO05D008566 2.8e-42 175.6 121 77.7
PGR042G1005 Punica granatum HOM05D006899 ORTHO05D008566 2.8e-42 175.6 121 76.9
Sopen07g029600 Solanum pennellii HOM05D006899 ORTHO05D008566 2.8e-42 175.6 122 77.9
TPR.G12679 Trifolium pratense HOM05D006899 ORTHO05D008566 2.8e-42 175.6 121 76.0
Potri.005G204200 Populus trichocarpa HOM05D006899 ORTHO05D008566 4.8e-42 174.9 126 76.2
arahy.Tifrunner.gnm1.ann1.226PX6 Arachis hypogaea HOM05D006899 ORTHO05D008566 1.1e-41 173.7 123 77.2
Actinidia03641 Actinidia chinensis HOM05D006899 ORTHO05D008566 1.8e-41 172.9 123 75.6
CiPaw.04G138700 Carya illinoinensis HOM05D006899 ORTHO05D008566 2.4e-41 172.6 124 71.8
CsaV3_4G031920 Cucumis sativus L. HOM05D006899 ORTHO05D008566 2.4e-41 172.6 122 75.4
Sabra02G0047300 Salix brachista HOM05D006899 ORTHO05D008566 2.4e-41 172.6 126 75.4
arahy.Tifrunner.gnm1.ann1.SNQ1P9 Arachis hypogaea HOM05D006899 ORTHO05D008566 3.1e-41 172.2 123 76.4
Potri.002G058000 Populus trichocarpa HOM05D006899 ORTHO05D008566 5.3e-41 171.4 123 75.6
MELO3C026968.2 Cucumis melo HOM05D006899 ORTHO05D008566 7.0e-41 171.0 122 74.6
TAR627G0648 Trochodendron aralioides HOM05D006899 ORTHO05D008566 9.1e-41 170.6 125 70.4
Glyma.14G029700 Glycine max HOM05D006899 ORTHO05D008566 1.6e-40 169.9 124 75.8
Migut.E01772 Erythranthe guttata HOM05D006899 ORTHO05D008566 2.0e-40 169.5 128 71.9
Cc05_g09700 Coffea canephora HOM05D006899 ORTHO05D008566 3.5e-40 168.7 125 73.6
Aa31LG1G24750 Aethionema arabicum HOM05D006899 ORTHO05D008566 4.5e-40 168.3 120 75.8
LjContig00049g0021241 Lotus japonicus HOM05D006899 ORTHO05D008566 7.7e-40 167.5 122 73.8
Manes.10G088300 Manihot esculenta HOM05D006899 ORTHO05D008566 1.0e-39 167.2 125 74.4
Sed0025977 Sechium edule HOM05D006899 ORTHO05D008566 1.0e-39 167.2 122 72.1
CANSAT64G2357 Cannabis sativa HOM05D006899 ORTHO05D008566 1.3e-39 166.8 122 70.5
MSTRG.12841 Avicennia marina HOM05D006899 ORTHO05D008566 2.2e-39 166.0 122 73.0
Hund24233 Selenicereus undatus HOM05D006899 ORTHO05D008566 2.2e-39 166.0 151 63.6
Sp4g25100 Schrenkiella parvula HOM05D006899 ORTHO05D008566 2.9e-39 165.6 120 74.2
Eucgr.A02015 Eucalyptus grandis HOM05D006899 ORTHO05D008566 3.8e-39 165.2 124 72.6
ClCG11G016470 Citrullus lanatus HOM05D006899 ORTHO05D008566 6.5e-39 164.5 116 74.1
SGA_v2.0_scaffold4G02123 Striga asiatica HOM05D006899 ORTHO05D008566 6.5e-39 164.5 125 69.6
BcaB06g29274 Brassica carinata HOM05D006899 ORTHO05D008566 1.1e-38 163.7 118 73.7
AL4G41610 Arabidopsis lyrata HOM05D006899 ORTHO05D008566 1.5e-38 163.3 118 76.3
SalBow7G1887 Salvia bowleyana HOM05D006899 ORTHO05D008566 1.9e-38 162.9 146 62.3
AT2G42975 Arabidopsis thaliana HOM05D006899 ORTHO05D008566 3.2e-38 162.2 117 74.4
BcaC02g07213 Brassica carinata HOM05D006899 ORTHO05D008566 4.2e-38 161.8 121 72.7
C04p70000 Brassica napus HOM05D006899 ORTHO05D008566 4.2e-38 161.8 121 72.7
BolC4t28500H Brassica oleracea HOM05D006899 ORTHO05D008566 4.2e-38 161.8 121 72.7
BraA04t18701Z Brassica rapa HOM05D006899 ORTHO05D008566 4.2e-38 161.8 147 64.6
CSS0032532 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 1.2e-37 160.2 125 70.4
CARHR138030 Cardamine hirsuta HOM05D006899 ORTHO05D008566 1.6e-37 159.8 128 70.3
Carub.0004s2544 Capsella rubella HOM05D006899 ORTHO05D008566 2.7e-37 159.1 120 74.2
Sc13g0007020 Simmondsia chinensis HOM05D006899 ORTHO05D008566 2.7e-37 159.1 120 70.8
MBI10_g21113_MAGBIO Magnolia biondii HOM05D006899 ORTHO05D008566 3.6e-37 158.7 125 71.2
BNapus_Darmor_BZH_scaffold_64p00160 Brassica napus HOM05D006899 ORTHO05D008566 4.7e-37 158.3 119 73.9
THA.LOC104802283 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 4.7e-37 158.3 127 66.9
Thhalv10017256m.g Eutrema salsugineum HOM05D006899 ORTHO05D008566 6.1e-37 157.9 116 72.4
ECA233G0523 Erigeron canadensis HOM05D006899 ORTHO05D008566 3.0e-36 155.6 138 65.9
EL10Ac9g22843 Beta vulgaris HOM05D006899 ORTHO05D008566 1.2e-35 153.7 123 72.4
AUR62015134 Chenopodium quinoa HOM05D006899 ORTHO05D008566 3.3e-35 152.1 123 70.7
AUR62017595 Chenopodium quinoa HOM05D006899 ORTHO05D008566 3.3e-35 152.1 123 69.9
HanXRQChr17g0554721 Helianthus annuus HOM05D006899 ORTHO05D008566 9.7e-35 150.6 137 63.5
THA.LOC104803370 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 9.7e-35 150.6 124 66.1
Dinv09142 Davidia involucrata HOM05D006899 ORTHO05D008566 1.3e-34 150.2 102 77.5
Ah.01g013620 Amaranthus hybridus HOM05D006899 ORTHO05D008566 6.3e-34 147.9 99 76.8
Aqoxy1G02918 Aquilegia oxysepala HOM05D006899 ORTHO05D008566 8.2e-34 147.5 122 65.6
Lj1P601T16 Lonicera japonica HOM05D006899 ORTHO05D008566 1.8e-33 146.4 85 87.1
Lsat_1_v5_gn_8_137860 Lactuca sativa HOM05D006899 ORTHO05D008566 9.1e-33 144.1 135 60.0
Lalb_Chr04g0248871 Lupinus albus HOM05D006899 ORTHO05D008566 9.1e-33 144.1 95 75.8
Duzib133G1045 Durio zibethinus HOM05D006899 ORTHO05D008566 2.0e-32 142.9 94 73.4
CSS0025344 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 2.2e-31 139.4 125 61.6
Os01g0666600 Oryza sativa ssp. japonica HOM05D006899 ORTHO05D008566 7.2e-30 134.4 131 61.8
CDE05G0801 Ceratophyllum demersum HOM05D006899 ORTHO05D008566 2.7e-29 132.5 123 60.2
ATR0585G139 Amborella trichopoda HOM05D006899 ORTHO05D008566 1.2e-27 127.1 121 62.0
PSO675G8667 Papaver somniferum HOM05D006899 ORTHO05D008566 7.5e-27 124.4 134 57.5
unitig_60.g25592 Utricularia gibba HOM05D006899 ORTHO05D008566 2.2e-26 122.9 124 61.3
HPP92_010055 Vanilla planifolia HOM05D006899 ORTHO05D008566 2.8e-26 122.5 120 57.5
PSO478G1301 Papaver somniferum HOM05D006899 ORTHO05D008566 3.7e-26 122.1 134 56.7
Zm00001eb157430 Zea mays HOM05D006899 ORTHO05D008566 8.3e-26 120.9 127 53.5
Hund24244 Selenicereus undatus HOM05D006899 ORTHO05D008566 7.0e-25 117.9 97 68.0
PSO541G6147 Papaver somniferum HOM05D006899 ORTHO05D008566 1.2e-24 117.1 122 59.8
Nitab4.5_0004243g0030 Nicotiana tabacum HOM05D006899 ORTHO05D008566 8.5e-23 110.9 83 72.3
Nitab4.5_0004950g0010 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.4e-20 103.6 81 71.6
Nitab4.5_0009604g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.4e-20 103.6 81 71.6
Pp3c13_6560 Physcomitrium patens HOM05D006899 ORTHO05D008566 1.4e-20 103.6 122 47.5
Mapoly0120s0054 Marchantia polymorpha HOM05D006899 ORTHO05D008566 9.8e-19 97.4 146 43.8
Nitab4.5_0002251g0080 Nicotiana tabacum HOM05D006899 ORTHO05D008566 7.0e-17 91.3 94 55.3
TWI23G0441 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 1.6e-16 90.1 68 72.1
AagrBONN_evm.TU.Sc2ySwM_368.298 Anthoceros agrestis HOM05D006899 ORTHO05D008566 1.3e-15 87.0 120 42.5
Medtr5g016040 Medicago truncatula HOM05D006899 ORTHO05D008566 3.8e-15 85.5 80 60.0
SMO353G0201 Selaginella moellendorffii HOM05D006899 ORTHO05D008566 6.8e-12 74.7 88 51.1
Medtr7g035145 Medicago truncatula HOM05D006899 ORTHO05D008566 1.6e-08 63.5 60 48.3


User provided reference genes

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