Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G1904 Fragaria x ananassa HOM05D016995 ORTHO05D020620 3.3e-46 188.0 91 100.0
FvH4_6g33604 Fragaria vesca HOM05D016995 ORTHO05D020620 1.3e-37 159.5 78 98.7
FvH4_3g24801 Fragaria vesca HOM05D016995 ORTHO05D020620 3.7e-37 157.9 78 97.4
FvH4_4g22472 Fragaria vesca HOM05D016995 ORTHO05D020620 2.6e-35 151.8 78 94.9
FvH4_3g20431 Fragaria vesca HOM05D000017 ORTHO05D000013 8.4e-26 120.2 60 91.7
FvH4_6g25412 Fragaria vesca HOM05D000017 ORTHO05D000013 1.6e-16 89.4 60 71.7
RcHm_v2.0_Chr7g0223891 Rosa chinensis HOM05D000017 ORTHO05D000013 3.9e-15 84.7 60 63.3
RcHm_v2.0_Chr1g0352511 Rosa chinensis HOM05D000017 ORTHO05D000013 6.7e-15 84.0 52 73.1
RcHm_v2.0_Chr5g0079641 Rosa chinensis HOM05D000017 ORTHO05D000013 8.8e-15 83.6 52 71.2
FvH4_1g28543 Fragaria vesca HOM05D000017 ORTHO05D000013 3.3e-14 81.6 60 60.0
FvH4_4g05150 Fragaria vesca HOM05D008813 ORTHO05D010456 3.7e-13 78.2 59 61.0
FvH4_1g09981 Fragaria vesca HOM05D000017 ORTHO05D010456 6.3e-13 77.4 59 57.6
FvH4_6g32522 Fragaria vesca HOM05D000017 ORTHO05D000013 9.1e-12 73.6 52 65.4
RcHm_v2.0_Chr2g0150401 Rosa chinensis HOM05D000017 ORTHO05D000013 2.0e-11 72.4 55 58.2
RcHm_v2.0_Chr6g0266931 Rosa chinensis HOM05D000017 ORTHO05D000013 4.5e-11 71.2 52 59.6
FvH4_4g08122 Fragaria vesca HOM05D016995 ORTHO05D020620 6.1e-08 60.8 36 75.0
Hma1.2p1_0439F.1_g153240 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.0e-07 58.5 52 53.8
ECA236G3400 Erigeron canadensis HOM05D010435 ORTHO05D002071 8.8e-07 57.0 55 47.3
CAN.G1273.35 Capsicum annuum HOM05D003329 ORTHO05D006664 1.1e-06 56.6 58 43.1
Hma1.2p1_0787F.1_g217970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-06 56.2 51 45.1
Hma1.2p1_1793F.1_g302600 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-06 56.2 51 45.1
TWI56G0654 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.5e-06 56.2 52 48.1
ECA247G1352 Erigeron canadensis HOM05D000017 ORTHO05D000013 2.0e-06 55.8 54 48.1
HanXRQChr16g0514791 Helianthus annuus HOM05D000017 ORTHO05D000013 2.0e-06 55.8 55 49.1
Hma1.2p1_0580F.1_g182840 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.0e-06 55.8 53 47.2
Ca_26785_v3 Cicer arietinum L. HOM05D000017 ORTHO05D011894 3.3e-06 55.1 59 45.8
ECA248G0790 Erigeron canadensis HOM05D000038 ORTHO05D000143 3.3e-06 55.1 66 43.9
TWI12G0251 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.3e-06 55.1 52 48.1
ECA240G1572 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.4e-06 54.7 54 46.3
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 4.4e-06 54.7 57 49.1
Ca_31024_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 5.7e-06 54.3 59 42.4
Ca_12200_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 7.4e-06 53.9 59 42.4
ECA246G3136 Erigeron canadensis HOM05D000017 ORTHO05D000013 7.4e-06 53.9 55 45.5
FAN19G1088 Fragaria x ananassa HOM05D016995 ORTHO05D020620 7.4e-06 53.9 36 58.3
HanXRQChr05g0162391 Helianthus annuus HOM05D000017 ORTHO05D000013 9.7e-06 53.5 55 47.3


User provided reference genes

Program Settings