Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.2e-67 258.8 134 100.0
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.1e-66 256.5 134 99.3
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 9.4e-58 226.9 134 89.6
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.2e-57 226.5 134 89.6
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.2e-57 226.5 134 89.6
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.2e-57 226.5 134 89.6
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 2.7e-57 225.3 134 88.8
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.7e-57 225.3 134 88.8
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.7e-57 225.3 134 88.8
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.7e-57 224.6 134 88.8
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.7e-57 224.6 134 88.8
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 6.1e-57 224.2 134 88.8
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 5.2e-48 194.5 134 74.6
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 6.8e-48 194.1 134 75.4
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 1.2e-47 193.4 122 82.8
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 1.3e-46 189.9 138 77.5
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 2.8e-46 188.7 135 76.3
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 4.9e-46 188.0 134 75.4
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 6.3e-46 187.6 137 76.6
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 6.3e-46 187.6 134 74.6
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.1e-45 186.8 105 87.6
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.4e-45 186.4 134 74.6
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 1.8e-45 186.0 137 75.2
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 2.4e-45 185.7 135 74.8
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 3.1e-45 185.3 134 73.9
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 3.1e-45 185.3 137 73.7
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 3.1e-45 185.3 137 73.0
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 4.1e-45 184.9 138 72.5
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 7.0e-45 184.1 137 72.3
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 7.0e-45 184.1 138 73.2
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 9.1e-45 183.7 135 72.6
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 1.2e-44 183.3 135 71.9
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 2.7e-44 182.2 135 73.3
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 4.5e-44 181.4 134 73.1
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 4.5e-44 181.4 135 72.6
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 5.9e-44 181.0 134 70.1
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 5.9e-44 181.0 136 75.0
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 5.9e-44 181.0 136 72.1
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 5.9e-44 181.0 138 74.6
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 7.7e-44 180.6 134 71.6
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 7.7e-44 180.6 134 73.1
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 1.0e-43 180.3 135 73.3
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 1.0e-43 180.3 135 71.9
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 1.0e-43 180.3 135 72.6
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 1.3e-43 179.9 134 72.4
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 1.3e-43 179.9 135 72.6
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 1.7e-43 179.5 138 72.5
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 1.7e-43 179.5 134 71.6
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 1.7e-43 179.5 135 70.4
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 2.3e-43 179.1 135 73.3
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 2.3e-43 179.1 135 71.1
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 2.9e-43 178.7 138 73.9
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 2.9e-43 178.7 136 71.3
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 1.1e-42 176.8 136 72.8
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 1.5e-42 176.4 116 81.9
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 4.2e-42 174.9 138 69.6
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 4.2e-42 174.9 133 72.2
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 5.6e-42 174.5 137 70.8
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 5.6e-42 174.5 135 69.6
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 5.6e-42 174.5 136 71.3
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 5.6e-42 174.5 105 82.9
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 7.2e-42 174.1 105 87.6
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 7.2e-42 174.1 134 70.9
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 9.5e-42 173.7 135 68.1
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 1.2e-41 173.3 135 70.4
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 2.1e-41 172.6 136 70.6
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 3.6e-41 171.8 135 71.1
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 6.1e-41 171.0 138 68.8
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 6.1e-41 171.0 113 77.0
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 8.0e-41 170.6 117 76.1
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 8.0e-41 170.6 135 68.9
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 8.0e-41 170.6 135 70.4
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 8.0e-41 170.6 135 70.4
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 8.0e-41 170.6 136 69.1
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 1.8e-40 169.5 134 67.2
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 1.8e-40 169.5 134 67.2
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 4.0e-40 168.3 106 79.2
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 8.9e-40 167.2 135 68.1
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 8.9e-40 167.2 135 67.4
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 8.9e-40 167.2 138 68.1
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 1.2e-39 166.8 136 69.9
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 1.2e-39 166.8 136 71.3
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 1.5e-39 166.4 105 77.1
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 1.5e-39 166.4 105 77.1
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 1.5e-39 166.4 105 77.1
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 1.5e-39 166.4 105 77.1
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 1.5e-39 166.4 135 65.9
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 2.0e-39 166.0 137 69.3
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 2.6e-39 165.6 135 67.4
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 3.4e-39 165.2 111 73.9
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 4.4e-39 164.9 135 66.7
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 5.7e-39 164.5 101 83.2
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 9.8e-39 163.7 128 67.2
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 2.2e-38 162.5 135 65.9
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 2.9e-38 162.2 135 68.1
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 3.7e-38 161.8 135 65.9
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 8.3e-38 160.6 93 81.7
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 8.3e-38 160.6 129 66.7
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.1e-37 160.2 135 65.2
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 1.4e-37 159.8 133 64.7
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 1.8e-37 159.5 139 64.0
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 2.4e-37 159.1 90 84.4
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 2.4e-37 159.1 106 77.4
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 5.4e-37 157.9 92 82.6
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 7.0e-37 157.5 135 65.2
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 9.2e-37 157.1 104 76.9
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.2e-36 156.8 114 71.9
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 1.6e-36 156.4 106 75.5
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 2.7e-36 155.6 106 75.5
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 2.7e-36 155.6 134 64.2
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 5.9e-36 154.5 135 63.0
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 1.7e-35 152.9 97 78.4
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 1.7e-35 152.9 92 79.3
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 5.0e-35 151.4 92 78.3
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 1.9e-34 149.4 135 60.7
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.9e-34 149.4 92 78.3
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 2.5e-34 149.1 100 75.0
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 4.3e-34 148.3 124 67.7
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 5.6e-34 147.9 138 63.8
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 2.8e-33 145.6 104 71.2
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 8.0e-33 144.1 120 62.5
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 1.8e-32 142.9 135 60.7
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.5e-31 139.8 137 56.9
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 2.9e-30 135.6 90 74.4
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.0e-28 129.4 134 60.4
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 2.7e-28 129.0 107 62.6
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 1.1e-26 123.6 123 61.8
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 8.1e-25 117.5 93 66.7
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 6.4e-22 107.8 118 49.2
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 7.1e-21 104.4 120 45.8
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 1.2e-20 103.6 92 56.5
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 1.5e-18 96.7 91 51.6
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 1.2e-17 93.6 105 47.6
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 6.8e-16 87.8 51 78.4
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 4.6e-12 75.1 98 43.9
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 1.0e-11 73.9 62 61.3
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 1.5e-10 70.1 117 34.2
Dinv24762 Davidia involucrata HOM05D003270 ORTHO05D003662 2.4e-08 62.8 107 44.9
PRCOL_00001894 Prasinoderma coloniale HOM05D005499 ORTHO05D006666 2.2e-06 56.2 95 34.7
Actinidia36173 Actinidia chinensis HOM05D005499 ORTHO05D006666 2.9e-06 55.8 83 49.4


User provided reference genes

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