Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G1765 Fragaria x ananassa HOM05D032511 ORTHO05D000039 5.5e-86 320.9 155 100.0
FAN05G2801 Fragaria x ananassa HOM05D032511 ORTHO05D000039 1.3e-34 150.2 83 90.4
FAN02G2676 Fragaria x ananassa HOM05D032511 ORTHO05D205212 1.1e-22 110.5 54 96.3
FAN04G2331 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.1e-12 75.5 172 39.0
Haze_13252 Corylus avellana HOM05D000007 ORTHO05D000039 1.2e-11 73.9 164 36.6
FAN04G2450 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.2e-11 73.9 172 37.2
Haze_13248 Corylus avellana HOM05D000029 ORTHO05D001395 4.5e-11 72.0 162 34.0
FvH4_5g33960 Fragaria vesca HOM05D000007 ORTHO05D000039 4.5e-11 72.0 172 36.0
FAN08G3168 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.5e-11 72.0 172 36.0
FAN18G4160 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.5e-11 72.0 172 36.0
Haze_13253 Corylus avellana HOM05D000007 ORTHO05D000039 2.2e-10 69.7 161 35.4
FAN02G4094 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.2e-09 65.5 59 64.4
FAN09G0182 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.5e-09 65.1 57 63.2
QL08p040393 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-08 63.5 67 47.8
Manes.07G011100 Manihot esculenta HOM05D000007 ORTHO05D000039 4.6e-08 62.0 60 51.7
CiPaw.03G182200 Carya illinoinensis HOM05D000007 ORTHO05D000039 6.1e-08 61.6 77 44.2
RcHm_v2.0_Chr2g0131341 Rosa chinensis HOM05D000007 ORTHO05D000039 7.9e-08 61.2 157 30.6
Haze_13301 Corylus avellana HOM05D000007 ORTHO05D000039 1.4e-07 60.5 167 32.3
Haze_15767 Corylus avellana HOM05D000007 ORTHO05D000039 1.4e-07 60.5 46 54.3
Dinv21276 Davidia involucrata HOM05D000007 ORTHO05D000039 1.8e-07 60.1 158 29.7
Haze_13298 Corylus avellana HOM05D000007 ORTHO05D000039 2.3e-07 59.7 66 47.0
Dinv12702 Davidia involucrata HOM05D000007 ORTHO05D000039 3.0e-07 59.3 62 45.2
Manes.07G010000 Manihot esculenta HOM05D000007 ORTHO05D000039 3.0e-07 59.3 69 50.7
Dinv12703 Davidia involucrata HOM05D000007 ORTHO05D000039 3.9e-07 58.9 62 48.4
Manes.07G011000 Manihot esculenta HOM05D000007 ORTHO05D000039 3.9e-07 58.9 60 48.3
QL08p040450 Quercus lobata HOM05D000007 ORTHO05D000039 3.9e-07 58.9 70 47.1
MD09G1091100 Malus domestica HOM05D000007 ORTHO05D000039 5.1e-07 58.5 59 45.8
Actinidia29354 Actinidia chinensis HOM05D000007 ORTHO05D000039 6.7e-07 58.2 58 48.3
QL08p040468 Quercus lobata HOM05D000007 ORTHO05D000039 6.7e-07 58.2 70 45.7
Manes.07G010100 Manihot esculenta HOM05D000007 ORTHO05D000039 8.8e-07 57.8 60 48.3
Prupe.5G081900 Prunus persica HOM05D000007 ORTHO05D000039 8.8e-07 57.8 66 43.9
QL04p019545 Quercus lobata HOM05D000007 ORTHO05D000039 8.8e-07 57.8 44 52.3
Haze_13295 Corylus avellana HOM05D000007 ORTHO05D000039 1.5e-06 57.0 71 42.3
Potri.001G262900 Populus trichocarpa HOM05D000007 ORTHO05D000039 1.5e-06 57.0 58 53.4
Hma1.2p1_0178F.1_g078390 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 2.0e-06 56.6 65 38.5
Haze_12717 Corylus avellana HOM05D000007 ORTHO05D000039 2.5e-06 56.2 167 28.1
QL04p019108 Quercus lobata HOM05D000007 ORTHO05D000039 2.5e-06 56.2 49 46.9
QL08p040501 Quercus lobata HOM05D000007 ORTHO05D000039 2.5e-06 56.2 70 41.4
Dinv19778 Davidia involucrata HOM05D000007 ORTHO05D000039 4.3e-06 55.5 54 48.1
Gohir.D11G296400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.3e-06 55.5 45 51.1
Gorai.007G319500 Gossypium raimondii HOM05D000007 ORTHO05D000039 4.3e-06 55.5 45 51.1
QL08p040430 Quercus lobata HOM05D000007 ORTHO05D000039 5.7e-06 55.1 71 47.9
Rhsim04G0065500 Rhododendron simsii HOM05D000007 ORTHO05D000039 5.7e-06 55.1 74 36.5
Cfa007491 Carpinus fangiana HOM05D000007 ORTHO05D000039 7.4e-06 54.7 162 27.8
Cc05_g08680 Coffea canephora HOM05D000007 ORTHO05D000039 7.4e-06 54.7 81 34.6
Haze_13541 Corylus avellana HOM05D000007 ORTHO05D000039 7.4e-06 54.7 62 48.4
Oeu028657.1 Olea europaea HOM05D000007 ORTHO05D000039 7.4e-06 54.7 55 41.8
Haze_08568 Corylus avellana HOM05D000007 ORTHO05D000039 9.7e-06 54.3 60 45.0
Dinv23704 Davidia involucrata HOM05D000007 ORTHO05D000039 9.7e-06 54.3 175 25.7
Prupe.5G081800 Prunus persica HOM05D000007 ORTHO05D000039 9.7e-06 54.3 47 51.1


User provided reference genes

Program Settings