Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G1695 Fragaria x ananassa HOM05D008333 ORTHO05D010371 5.5e-116 421.0 215 100.0
FAN14G3781 Fragaria x ananassa HOM05D000349 ORTHO05D001782 4.2e-92 341.7 173 100.0
FvH4_6g49300 Fragaria vesca HOM05D008333 ORTHO05D010371 7.9e-91 337.4 174 98.9
FvH4_6g49320 Fragaria vesca HOM05D008333 ORTHO05D010371 4.8e-88 328.2 174 96.0
FAN14G5614 Fragaria x ananassa HOM05D008333 ORTHO05D010371 4.8e-88 328.2 174 96.0
RcHm_v2.0_Chr2g0169181 Rosa chinensis HOM05D008333 ORTHO05D010371 1.7e-61 240.0 174 75.3
RcHm_v2.0_Chr2g0169171 Rosa chinensis HOM05D008333 ORTHO05D010371 5.6e-60 235.0 174 72.4
FAN02G4458 Fragaria x ananassa HOM05D008333 ORTHO05D010371 1.6e-59 233.4 174 73.0
Prupe.3G272200 Prunus persica HOM05D008333 ORTHO05D010371 4.7e-35 152.1 186 48.4
Potri.017G077100 Populus trichocarpa HOM05D008333 ORTHO05D010371 4.7e-27 125.6 160 43.8
Cfa021167 Carpinus fangiana HOM05D008333 ORTHO05D010371 3.9e-21 105.9 115 45.2
Haze_14585 Corylus avellana HOM05D008333 ORTHO05D010371 5.1e-21 105.5 115 46.1
QL02p080535 Quercus lobata HOM05D008333 ORTHO05D010371 1.9e-20 103.6 133 39.8
COL.COLO4_25183 Corchorus olitorius HOM05D008333 ORTHO05D010371 2.8e-19 99.8 137 36.5
CiPaw.03G030300 Carya illinoinensis HOM05D008333 ORTHO05D010371 6.2e-19 98.6 141 39.0
Cfa007508 Carpinus fangiana HOM05D008333 ORTHO05D010371 2.0e-17 93.6 160 36.2
Duzib147G0630 Durio zibethinus HOM05D008333 ORTHO05D010371 1.7e-16 90.5 122 34.4
Manes.17G020900 Manihot esculenta HOM05D008333 ORTHO05D010371 6.4e-16 88.6 122 41.0
Gohir.A09G021000 Gossypium hirsutum HOM05D008333 ORTHO05D010371 3.5e-14 82.8 136 33.1
Thecc.04G074300 Theobroma cacao HOM05D008333 ORTHO05D010371 6.0e-14 82.0 108 38.0
CSS0029447 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 7.9e-14 81.6 133 33.1
CSS0048142 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 7.9e-14 81.6 133 33.1
Gorai.006G023800 Gossypium raimondii HOM05D008333 ORTHO05D010371 1.8e-13 80.5 117 35.9
Gorai.006G024100 Gossypium raimondii HOM05D008333 ORTHO05D010371 1.8e-13 80.5 129 32.6
Glyma.18G255500 Glycine max HOM05D008333 ORTHO05D010371 3.9e-13 79.3 128 32.8
Actinidia38746 Actinidia chinensis HOM05D008333 ORTHO05D010371 5.1e-13 79.0 134 32.1
Gohir.D09G020400 Gossypium hirsutum HOM05D008333 ORTHO05D010371 6.7e-13 78.6 129 34.1
Lj7P401T71 Lonicera japonica HOM05D008333 ORTHO05D010371 1.9e-12 77.0 128 31.2
CSS0005469 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 2.5e-12 76.6 150 32.7
TAR481G0008 Trochodendron aralioides HOM05D008333 ORTHO05D010371 2.5e-12 76.6 130 32.3
Phvul.004G025900 Phaseolus vulgaris HOM05D008333 ORTHO05D010371 3.3e-12 76.3 123 31.7
TAR481G0013 Trochodendron aralioides HOM05D008333 ORTHO05D010371 4.3e-12 75.9 130 32.3
VMungo0464G0738 Vigna mungo HOM05D008333 ORTHO05D010371 5.6e-12 75.5 142 33.8
Rhsim08G0065700 Rhododendron simsii HOM05D008333 ORTHO05D010371 9.6e-12 74.7 144 29.9
TPR.G7262 Trifolium pratense HOM05D008333 ORTHO05D010371 1.3e-11 74.3 169 32.0
Rhsim08G0065300 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.6e-11 73.9 142 29.6
Rhsim08G0065100 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.1e-11 73.6 167 28.1
Gohir.D11G275775 Gossypium hirsutum HOM05D008333 ORTHO05D010371 4.8e-11 72.4 113 35.4
Gorai.007G297900 Gossypium raimondii HOM05D008333 ORTHO05D010371 4.8e-11 72.4 113 35.4
Sopen04g006510 Solanum pennellii HOM05D008333 ORTHO05D010371 6.2e-11 72.0 101 35.6
CSS0007512 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 1.4e-10 70.9 145 33.1
Gohir.D09G020550 Gossypium hirsutum HOM05D008333 ORTHO05D010371 3.1e-10 69.7 113 37.2
Rhsim08G0065000 Rhododendron simsii HOM05D008333 ORTHO05D010371 9.0e-10 68.2 139 30.9
PGSC0003DMG400016257 Solanum tuberosum HOM05D008333 ORTHO05D010371 9.0e-10 68.2 138 32.6
Eucgr.I01914 Eucalyptus grandis HOM05D008333 ORTHO05D010371 1.5e-09 67.4 114 30.7
Rhsim08G0065600 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.5e-09 67.4 139 30.2
TAR371G0090 Trochodendron aralioides HOM05D008333 ORTHO05D010371 2.0e-09 67.0 104 33.7
Eucgr.L02760 Eucalyptus grandis HOM05D008333 ORTHO05D010371 2.6e-09 66.6 114 30.7
Rhsim08G0065200 Rhododendron simsii HOM05D008333 ORTHO05D010371 9.9e-09 64.7 139 29.5
Rhsim08G0065800 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.7e-08 63.9 129 30.2
Nn4g23042 Nelumbo nucifera HOM05D008333 ORTHO05D010371 2.2e-08 63.5 107 32.7
Eucgr.I01916 Eucalyptus grandis HOM05D008333 ORTHO05D010371 2.9e-08 63.2 112 30.4
Rhsim08G0065400 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.9e-08 63.2 121 30.6
Gohir.A11G265601 Gossypium hirsutum HOM05D008333 ORTHO05D010371 1.4e-07 60.8 85 40.0
Rhsim08G0066000 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.4e-07 60.8 140 27.9
MBI03_g32214_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 2.4e-07 60.1 131 34.4
Nn3g17126 Nelumbo nucifera HOM05D008333 ORTHO05D010371 2.4e-07 60.1 96 32.3
Lsat_1_v5_gn_4_179800 Lactuca sativa HOM05D019919 ORTHO05D010371 4.2e-07 59.3 109 30.3
MBI03_g35364_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 7.1e-07 58.5 142 34.5
Rhsim08G0065500 Rhododendron simsii HOM05D008333 ORTHO05D010371 9.3e-07 58.2 136 27.2
Rhsim08G0065900 Rhododendron simsii HOM05D008333 ORTHO05D010371 9.3e-07 58.2 136 27.2


User provided reference genes

Program Settings