Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g14781 Fragaria vesca HOM05D003981 ORTHO05D003666 3.6e-76 288.1 139 100.0
FAN14G1640 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.6e-76 288.1 139 100.0
FAN14G2468 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.6e-76 288.1 139 100.0
FvH4_5g08848 Fragaria vesca HOM05D003981 ORTHO05D003666 3.6e-68 261.5 139 91.4
FAN14G0912 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.0e-54 216.9 139 77.7
FAN04G2735 Fragaria x ananassa HOM05D002662 ORTHO05D002957 1.2e-50 203.4 138 76.8
FAN09G1093 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.6e-50 202.2 125 77.6
FAN18G1682 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.9e-49 198.0 138 74.6
FAN13G2289 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.2e-48 195.3 136 74.3
FvH4_5g07470 Fragaria vesca HOM05D003981 ORTHO05D003666 1.9e-45 186.0 136 68.4
FvH4_5g07350 Fragaria vesca HOM05D003981 ORTHO05D003666 7.3e-45 184.1 126 71.4
FvH4_5g07510 Fragaria vesca HOM05D003981 ORTHO05D003666 7.3e-45 184.1 136 67.6
FvH4_3g13181 Fragaria vesca HOM05D003981 ORTHO05D003666 9.5e-45 183.7 138 70.3
FAN11G0099 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.3e-43 179.1 138 68.8
FAN25G0499 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.6e-39 164.9 126 69.0
FAN18G1224 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.0e-38 162.2 114 69.3
FvH4_6g03511 Fragaria vesca HOM05D003981 ORTHO05D003666 2.5e-37 159.1 91 78.0
FAN18G0802 Fragaria x ananassa HOM05D002662 ORTHO05D003666 1.1e-32 143.7 126 60.3
FAN02G0835 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.1e-31 139.4 127 61.4
FAN16G2707 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.5e-21 105.9 63 76.2
FvH4_3g40671 Fragaria vesca HOM05D003981 ORTHO05D003666 3.3e-21 105.5 129 42.6
FAN16G2079 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.6e-21 104.8 129 42.6
FAN04G1299 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.6e-21 104.0 138 48.6
RcHm_v2.0_Chr3g0480281 Rosa chinensis HOM05D003981 ORTHO05D003666 6.8e-19 97.8 126 45.2
FAN28G1753 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.9e-19 97.4 145 41.4
FvH4_1g00691 Fragaria vesca HOM05D003981 ORTHO05D003666 1.2e-18 97.1 141 41.1
FvH4_5g06780 Fragaria vesca HOM05D003981 ORTHO05D003666 4.9e-17 91.7 121 43.0
FAN08G0901 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.9e-17 91.7 121 43.0
FAN18G0593 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.9e-17 91.7 121 43.0
FAN12G3036 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.4e-17 90.9 131 42.7
RcHm_v2.0_Chr2g0085201 Rosa chinensis HOM05D003981 ORTHO05D003666 1.4e-16 90.1 95 48.4
FvH4_4g34580 Fragaria vesca HOM05D003981 ORTHO05D003666 1.9e-16 89.7 131 42.7
FvH4_4g34520 Fragaria vesca HOM05D003981 ORTHO05D003666 2.4e-16 89.4 131 42.0
FvH4_6g09911 Fragaria vesca HOM05D003981 ORTHO05D003666 2.4e-16 89.4 91 47.3
FAN04G1922 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.2e-16 89.0 121 42.1
FAN17G1570 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.2e-16 89.0 131 42.0
FAN05G2982 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.2e-16 88.6 127 40.2
FAN04G2111 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.4e-16 88.2 129 45.0
FAN07G0986 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.1e-16 87.8 131 42.0
RcHm_v2.0_Chr6g0253541 Rosa chinensis HOM05D003981 ORTHO05D003666 7.1e-16 87.8 128 41.4
MD12G1195000 Malus domestica HOM05D003981 ORTHO05D003666 9.3e-16 87.4 127 38.6
FAN12G2446 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.2e-15 87.0 131 42.0
FvH4_6g09550 Fragaria vesca HOM05D003981 ORTHO05D003666 1.6e-15 86.7 127 38.6
FAN18G2469 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-15 86.7 121 39.7
FAN08G0706 Fragaria x ananassa HOM05D005518 ORTHO05D001269 2.1e-15 86.3 145 37.2
FAN11G1242 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.1e-15 86.3 106 39.6
FAN08G0171 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.0e-14 84.0 130 43.8
FAN26G0221 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.0e-14 84.0 106 43.4
FvH4_1g25190 Fragaria vesca HOM05D003981 ORTHO05D003666 1.3e-14 83.6 128 41.4
FAN20G0367 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.3e-14 83.6 139 36.0
FvH4_2g25871 Fragaria vesca HOM05D003981 ORTHO05D003666 1.1e-13 80.5 125 38.4
Prupe.2G209200 Prunus persica HOM05D003981 ORTHO05D003666 1.9e-13 79.7 131 37.4
RcHm_v2.0_Chr5g0016491 Rosa chinensis HOM05D003981 ORTHO05D003666 1.9e-13 79.7 124 41.1
MD12G1195500 Malus domestica HOM05D003981 ORTHO05D003666 2.5e-13 79.3 133 39.1
FAN15G1118 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.3e-13 79.0 124 36.3
RcHm_v2.0_Chr4g0428611 Rosa chinensis HOM05D003981 ORTHO05D003666 5.6e-13 78.2 121 43.8
FAN13G0559 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.6e-13 77.4 124 38.7
FAN19G2785 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.6e-13 77.4 128 40.6
MD04G1179800 Malus domestica HOM05D003981 ORTHO05D003666 9.6e-13 77.4 127 35.4
FvH4_1g00570 Fragaria vesca HOM05D003981 ORTHO05D003666 1.3e-12 77.0 119 38.7
FvH4_2g04190 Fragaria vesca HOM05D003981 ORTHO05D003666 1.3e-12 77.0 127 38.6
FAN24G2659 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.3e-12 77.0 127 38.6
FvH4_2g20921 Fragaria vesca HOM05D003981 ORTHO05D003666 1.6e-12 76.6 143 35.0
FAN09G1004 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-12 76.6 124 39.5
FAN13G2481 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-12 76.6 121 43.0
FvH4_1g00551 Fragaria vesca HOM05D003981 ORTHO05D003666 2.8e-12 75.9 123 37.4
FAN08G1984 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.6e-12 75.5 122 37.7
FvH4_1g00812 Fragaria vesca HOM05D003981 ORTHO05D003666 1.4e-11 73.6 121 38.8
MD12G1195600 Malus domestica HOM05D003981 ORTHO05D003666 2.4e-11 72.8 131 36.6
RcHm_v2.0_Chr3g0460411 Rosa chinensis HOM05D003981 ORTHO05D003666 2.4e-11 72.8 131 38.9
RcHm_v2.0_Chr3g0449831 Rosa chinensis HOM05D003981 ORTHO05D003666 3.1e-11 72.4 133 36.1
FAN18G0964 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.0e-11 72.0 145 35.2
FAN07G1958 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.3e-11 71.6 127 37.8
Prupe.2G095800 Prunus persica HOM05D003981 ORTHO05D003666 6.9e-11 71.2 130 36.2
FAN15G2324 Fragaria x ananassa HOM05D002345 ORTHO05D002391 9.0e-11 70.9 101 40.6
FvH4_1g20161 Fragaria vesca HOM05D003981 ORTHO05D003666 1.2e-10 70.5 143 33.6
Prupe.7G195400 Prunus persica HOM05D003981 ORTHO05D003666 1.2e-10 70.5 141 36.2
Prupe.7G182200 Prunus persica HOM05D003981 ORTHO05D003666 2.6e-10 69.3 140 34.3
MD11G1006900 Malus domestica HOM05D003981 ORTHO05D003666 3.4e-10 68.9 122 33.6
FAN18G2397 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.8e-10 68.2 136 34.6
FAN08G0629 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.3e-09 67.0 130 36.2
FvH4_5g38320 Fragaria vesca HOM05D003981 ORTHO05D003666 1.7e-09 66.6 142 33.1
FAN08G0796 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.2e-09 66.2 142 33.1
FAN05G1423 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.9e-09 65.1 125 37.6
FAN23G0843 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.9e-09 65.1 77 44.2
FAN27G2648 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.4e-09 64.3 94 39.4
FAN28G0935 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.2e-08 62.0 113 36.3
FAN19G2493 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.4e-08 61.6 117 34.2
FvH4_6g09801 Fragaria vesca HOM05D003981 ORTHO05D003666 7.1e-08 61.2 138 34.8
FAN14G1975 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.1e-07 59.7 132 34.8
Prupe.2G096000 Prunus persica HOM05D003981 ORTHO05D003666 4.6e-07 58.5 135 32.6
Atru.chr5.2443 Acer truncatum HOM05D003981 ORTHO05D003666 6.0e-07 58.2 129 31.8
FvH4_3g01041 Fragaria vesca HOM05D003981 ORTHO05D003666 1.0e-06 57.4 100 39.0
FAN14G3610 Fragaria x ananassa HOM05D024243 ORTHO05D029582 6.6e-06 54.7 79 39.2
FAN14G5461 Fragaria x ananassa HOM05D024243 ORTHO05D029582 6.6e-06 54.7 79 39.2
FAN25G1054 Fragaria x ananassa HOM05D005518 ORTHO05D001269 6.6e-06 54.7 51 47.1


User provided reference genes

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