Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.1e-82 308.9 146 100.0
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 5.6e-80 300.8 146 96.6
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 3.6e-79 298.1 146 96.6
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.4e-78 296.2 146 95.2
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 6.2e-71 270.8 146 89.0
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 9.3e-67 256.9 146 84.9
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 1.4e-59 233.0 143 72.7
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 6.7e-57 224.2 143 71.3
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 4.0e-46 188.3 152 63.2
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 2.9e-44 182.2 138 63.8
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 4.9e-44 181.4 147 61.2
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 8.4e-44 180.6 137 65.7
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 2.5e-43 179.1 152 61.2
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 9.3e-43 177.2 156 60.3
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 1.2e-42 176.8 100 81.0
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 7.9e-42 174.1 137 64.2
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 7.9e-42 174.1 141 62.4
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 7.9e-42 174.1 151 61.6
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 1.8e-41 172.9 150 60.7
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 2.3e-41 172.6 141 61.7
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 3.9e-41 171.8 151 60.3
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 3.9e-41 171.8 157 58.0
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 3.9e-41 171.8 146 60.3
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 6.7e-41 171.0 96 79.2
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 8.7e-41 170.6 131 63.4
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 1.1e-40 170.2 142 61.3
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 1.1e-40 170.2 147 60.5
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 1.5e-40 169.9 143 61.5
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 1.5e-40 169.9 138 62.3
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 1.9e-40 169.5 138 60.1
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 1.9e-40 169.5 144 56.9
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 1.9e-40 169.5 134 62.7
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 1.9e-40 169.5 142 59.2
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 1.9e-40 169.5 153 56.9
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 4.3e-40 168.3 133 61.7
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 7.4e-40 167.5 148 57.4
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 1.6e-39 166.4 141 60.3
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 2.8e-39 165.6 151 57.6
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 4.8e-39 164.9 92 79.3
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 4.8e-39 164.9 150 54.7
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 4.8e-39 164.9 140 58.6
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 6.3e-39 164.5 132 59.1
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 8.2e-39 164.1 141 58.9
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 8.2e-39 164.1 150 57.3
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 1.1e-38 163.7 150 56.7
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 1.1e-38 163.7 150 56.7
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 1.1e-38 163.7 142 60.6
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 1.4e-38 163.3 98 73.5
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 1.4e-38 163.3 142 62.0
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 2.4e-38 162.5 144 55.6
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 2.4e-38 162.5 125 63.2
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 2.4e-38 162.5 88 78.4
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 3.1e-38 162.2 127 59.8
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 4.1e-38 161.8 142 57.7
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 6.9e-38 161.0 148 54.1
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 6.9e-38 161.0 120 64.2
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 2.0e-37 159.5 80 87.5
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 2.6e-37 159.1 142 61.3
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 4.5e-37 158.3 155 56.1
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 4.5e-37 158.3 130 60.0
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 7.7e-37 157.5 93 74.2
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.0e-36 157.1 87 80.5
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 1.0e-36 157.1 123 59.3
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 1.7e-36 156.4 81 84.0
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 3.8e-36 155.2 107 66.4
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 6.5e-36 154.5 84 77.4
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 1.4e-35 153.3 85 76.5
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 4.2e-35 151.8 139 61.2
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 7.2e-35 151.0 73 89.0
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 1.2e-34 150.2 81 80.2
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 1.2e-34 150.2 140 56.4
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 1.6e-34 149.8 92 68.5
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 2.7e-34 149.1 96 71.9
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 7.9e-34 147.5 125 62.4
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 7.9e-34 147.5 144 52.8
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 1.0e-33 147.1 120 61.7
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 1.0e-33 147.1 142 55.6
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 1.0e-33 147.1 143 51.7
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 3.0e-33 145.6 71 85.9
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 6.7e-33 144.4 83 73.5
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 6.7e-33 144.4 73 83.6
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 8.8e-33 144.1 151 54.3
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 2.2e-31 139.4 105 57.1
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 3.7e-31 138.7 95 65.3
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 1.4e-30 136.7 116 61.2
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 1.8e-30 136.3 89 65.2
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.2e-29 133.7 66 83.3
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 2.0e-29 132.9 69 85.5
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 1.0e-28 130.6 72 81.9
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 1.3e-28 130.2 68 85.3
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 2.9e-28 129.0 70 80.0
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 5.0e-28 128.3 75 77.3
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 6.5e-28 127.9 130 54.6
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 6.5e-28 127.9 67 86.6
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 2.3e-25 119.4 72 68.1
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 2.8e-23 112.5 74 68.9
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 9.1e-22 107.5 106 54.7
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 1.2e-21 107.1 65 69.2
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 9.4e-19 97.4 69 65.2
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 1.6e-18 96.7 63 57.1
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 1.7e-07 60.1 37 67.6
Psat7g235560 Pisum sativum HOM05D007483 ORTHO05D009133 1.8e-06 56.6 85 42.4


User provided reference genes

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