Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G1402 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.4e-217 757.3 362 100.0
FvH4_6g47170 Fragaria vesca HOM05D006368 ORTHO05D006739 6.5e-186 654.1 384 85.9
FAN09G4055 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-142 510.4 385 70.1
FAN14G3911 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.3e-129 464.5 374 68.4
FAN10G0746 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.1e-128 463.0 374 68.2
FAN05G3822 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.8e-119 431.4 349 67.9
FvH4_6g47190 Fragaria vesca HOM05D006368 ORTHO05D006739 7.3e-113 411.4 375 62.4
FAN02G2985 Fragaria x ananassa HOM05D002060 ORTHO05D002098 1.9e-100 370.2 362 58.6
FAN09G1584 Fragaria x ananassa HOM05D006368 ORTHO05D035370 3.0e-66 256.5 357 45.7
RcHm_v2.0_Chr2g0166171 Rosa chinensis HOM05D006368 ORTHO05D006739 1.3e-58 231.1 405 40.0
FAN14G1492 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.4e-55 221.1 395 39.7
RcHm_v2.0_Chr2g0166201 Rosa chinensis HOM05D006368 ORTHO05D006739 1.4e-55 221.1 433 38.1
FvH4_6g47130 Fragaria vesca HOM05D006368 ORTHO05D006739 9.1e-55 218.4 395 39.5
FAN14G5568 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.2e-53 213.8 423 36.6
FvH4_6g47140 Fragaria vesca HOM05D006368 ORTHO05D006739 2.9e-53 213.4 423 36.6
FvH4_6g47161 Fragaria vesca HOM05D006368 ORTHO05D035370 5.7e-49 199.1 349 41.3
FAN02G3903 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.5e-36 157.1 417 30.5
FvH4_6g37591 Fragaria vesca HOM05D006368 ORTHO05D006739 7.2e-36 155.6 403 30.5
FvH4_6g47002 Fragaria vesca HOM05D006368 ORTHO05D006739 1.6e-35 154.5 423 31.2
FAN14G0640 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.6e-35 154.5 423 31.2
Prupe.3G239100 Prunus persica HOM05D006368 ORTHO05D006739 6.1e-35 152.5 457 29.8
FvH4_6g37552 Fragaria vesca HOM05D006368 ORTHO05D006739 1.8e-34 151.0 400 32.0
FAN08G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-33 148.3 395 32.2
FvH4_6g47001 Fragaria vesca HOM05D006368 ORTHO05D006739 2.0e-33 147.5 437 29.5
FAN02G0373 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.7e-33 145.2 422 30.8
FAN13G2475 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.7e-32 144.4 396 32.3
FAN18G3544 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.2e-32 144.1 395 31.9
RcHm_v2.0_Chr2g0153831 Rosa chinensis HOM05D006368 ORTHO05D006739 2.8e-32 143.7 402 30.3
FvH4_6g49281 Fragaria vesca HOM05D006368 ORTHO05D006739 4.1e-31 139.8 400 32.5
FvH4_5g02330 Fragaria vesca HOM05D006368 ORTHO05D006739 2.7e-30 137.1 371 31.0
FAN05G1932 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.7e-30 135.6 373 29.5
RcHm_v2.0_Chr5g0067081 Rosa chinensis HOM05D006368 ORTHO05D006739 1.3e-29 134.8 450 27.6
FAN05G4829 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.0e-29 132.9 361 31.6
RcHm_v2.0_Chr4g0430971 Rosa chinensis HOM05D006368 ORTHO05D006739 3.2e-28 130.2 452 25.7
FAN14G2751 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.5e-28 129.4 384 29.4
FAN09G3687 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-27 128.3 404 30.2
FvH4_6g49120 Fragaria vesca HOM05D006368 ORTHO05D006739 1.6e-27 127.9 397 30.7
RcHm_v2.0_Chr7g0197821 Rosa chinensis HOM05D006368 ORTHO05D006739 6.8e-26 122.5 357 29.7
FvH4_6g36920 Fragaria vesca HOM05D006368 ORTHO05D006739 1.2e-25 121.7 375 30.7
FAN14G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.5e-25 121.3 369 32.0
FAN02G2153 Fragaria x ananassa HOM05D006186 ORTHO05D009138 3.4e-25 120.2 88 69.3
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.8e-23 114.4 371 28.3
FAN04G2785 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.4e-23 112.8 365 31.0
FAN14G2825 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-21 108.2 80 70.0
FAN05G5450 Fragaria x ananassa HOM05D006368 ORTHO05D035370 2.3e-21 107.5 65 80.0
FAN05G3646 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.9e-21 107.1 233 36.1
MD03G1085600 Malus domestica HOM05D006368 ORTHO05D006739 1.5e-20 104.8 362 29.8
FAN09G0854 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.2e-20 102.4 248 31.9
Prupe.3G291200 Prunus persica HOM05D006368 ORTHO05D006739 3.6e-19 100.1 469 24.9
FAN02G1443 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.7e-19 99.8 99 53.5
FAN05G1788 Fragaria x ananassa HOM05D006368 ORTHO05D025547 1.0e-18 98.6 382 27.7
FvH4_6g46020 Fragaria vesca HOM05D006368 ORTHO05D025547 4.0e-18 96.7 387 27.1
FAN14G1520 Fragaria x ananassa HOM05D006368 ORTHO05D025547 4.0e-18 96.7 387 27.1
FAN14G5490 Fragaria x ananassa HOM05D006368 ORTHO05D025547 4.0e-18 96.7 387 27.1
FAN14G0979 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.2e-18 96.3 279 27.6
FAN02G0248 Fragaria x ananassa HOM05D006368 ORTHO05D025547 6.8e-18 95.9 375 27.5
FAN09G0606 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.0e-17 94.4 170 37.1
FvH4_3g37301 Fragaria vesca HOM05D006368 ORTHO05D006739 2.6e-17 94.0 219 30.6
FAN02G0769 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.8e-17 92.0 363 25.3
FvH4_3g30930 Fragaria vesca HOM05D006368 ORTHO05D006739 2.8e-16 90.5 314 28.7
FAN16G0274 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.9e-16 89.7 220 31.4
FAN09G3725 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.4e-15 87.4 219 33.8
FAN02G3800 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.6e-14 84.7 103 45.6
FAN14G3251 Fragaria x ananassa HOM05D006368 ORTHO05D201493 2.0e-14 84.3 84 53.6
Lalb_Chr19g0133241 Lupinus albus HOM05D006368 ORTHO05D006739 2.0e-14 84.3 418 23.7
FAN24G2342 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.7e-14 84.0 298 28.2
FvH4_3g37281 Fragaria vesca HOM05D006368 ORTHO05D006739 2.9e-13 80.5 216 29.2
FvH4_6g49280 Fragaria vesca HOM05D006368 ORTHO05D006739 3.8e-13 80.1 200 30.5
FAN14G0584 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.8e-13 80.1 357 28.0
FAN14G2798 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.8e-13 80.1 357 28.0
FAN15G0762 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.8e-13 80.1 286 26.9
FAN02G0044 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.6e-13 79.0 378 24.6
MD09G1050100 Malus domestica HOM05D006368 ORTHO05D006739 1.1e-12 78.6 314 27.7
FvH4_6g39721 Fragaria vesca HOM05D006368 ORTHO05D006739 1.5e-12 78.2 269 27.1
FAN05G5254 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.9e-12 77.8 84 50.0
FAN02G1786 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.5e-12 77.4 228 29.4
FAN15G3238 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.5e-12 77.4 323 26.6
MD09G1027500 Malus domestica HOM05D006368 ORTHO05D006739 2.5e-12 77.4 310 27.4
FvH4_2g28870 Fragaria vesca HOM05D006368 ORTHO05D006739 3.3e-12 77.0 256 27.7
FAN09G2575 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.3e-12 75.9 433 26.3
FAN14G3691 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.3e-12 75.9 204 30.4
FAN20G1708 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.5e-12 75.5 327 26.3
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.1e-11 74.3 207 31.4
FAN02G2469 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.8e-11 73.9 193 31.1
MD05G1357800 Malus domestica HOM05D000151 ORTHO05D000074 2.8e-11 73.9 380 25.8
CiPaw.08G070000 Carya illinoinensis HOM05D000151 ORTHO05D000074 3.6e-11 73.6 408 26.0
FvH4_3g37300 Fragaria vesca HOM05D006368 ORTHO05D006739 4.7e-11 73.2 156 32.1
FAN12G2895 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.1e-11 72.8 219 28.8
FAN18G1252 Fragaria x ananassa HOM05D007346 ORTHO05D009044 6.1e-11 72.8 425 24.9
FAN14G3548 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.0e-11 72.4 349 24.6
FAN24G0202 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.0e-11 72.4 275 25.1
Dinv43794 Davidia involucrata HOM05D000151 ORTHO05D000074 1.4e-10 71.6 400 23.2
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.4e-10 71.6 412 25.7
Potri.006G015601 Populus trichocarpa HOM05D000151 ORTHO05D000074 2.3e-10 70.9 407 23.3
FvH4_3g28140 Fragaria vesca HOM05D010931 ORTHO05D013603 3.0e-10 70.5 426 24.2
FvH4_4g23711 Fragaria vesca HOM05D006368 ORTHO05D006739 6.8e-10 69.3 239 27.2
PSO170G2683 Papaver somniferum HOM05D000151 ORTHO05D000074 6.8e-10 69.3 387 23.8
FAN11G4008 Fragaria x ananassa HOM05D010931 ORTHO05D013603 1.2e-09 68.6 425 23.3
PSO210G5407 Papaver somniferum HOM05D000151 ORTHO05D000074 1.2e-09 68.6 387 24.0
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 2.6e-09 67.4 399 26.1
FAN05G0250 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.4e-09 67.0 385 25.7
Prupe.1G019300 Prunus persica HOM05D006368 ORTHO05D006739 4.4e-09 66.6 86 41.9
Nn1g04037 Nelumbo nucifera HOM05D000151 ORTHO05D000074 9.8e-09 65.5 379 24.3
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.3e-08 65.1 410 25.6
Prupe.1G004300 Prunus persica HOM05D006368 ORTHO05D006739 1.3e-08 65.1 63 50.8
CiPaw.08G069900 Carya illinoinensis HOM05D000151 ORTHO05D000074 2.9e-08 63.9 414 26.3
Dinv43798 Davidia involucrata HOM05D000713 ORTHO05D000547 2.9e-08 63.9 190 27.4
Migut.A00760 Erythranthe guttata HOM05D000151 ORTHO05D000074 2.9e-08 63.9 350 26.0
FAN02G0730 Fragaria x ananassa HOM05D011252 ORTHO05D013603 2.9e-08 63.9 189 28.6
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.9e-08 63.9 416 24.3
COL.COLO4_09712 Corchorus olitorius HOM05D001286 ORTHO05D000440 3.7e-08 63.5 195 26.2
Dinv20253 Davidia involucrata HOM05D000151 ORTHO05D000074 4.9e-08 63.2 400 24.8
FAN05G4522 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.9e-08 63.2 103 39.8
FAN12G2737 Fragaria x ananassa HOM05D007346 ORTHO05D009044 6.4e-08 62.8 199 29.6
FvH4_2g13532 Fragaria vesca HOM05D006368 ORTHO05D006739 1.4e-07 61.6 190 30.5
FvH4_6g16971 Fragaria vesca HOM05D011252 ORTHO05D029353 1.4e-07 61.6 193 28.5
QL02p013380 Quercus lobata HOM05D000151 ORTHO05D000074 1.4e-07 61.6 418 26.3
CANSAT25G2327 Cannabis sativa HOM05D000151 ORTHO05D000074 1.9e-07 61.2 413 24.0
Haze_03475 Corylus avellana HOM05D018164 ORTHO05D017223 1.9e-07 61.2 356 23.6
FvH4_4g01590 Fragaria vesca HOM05D007346 ORTHO05D009044 1.9e-07 61.2 199 29.6
FvH4_6g22332 Fragaria vesca HOM05D010931 ORTHO05D016562 3.2e-07 60.5 185 30.3
FAN22G0881 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.2e-07 60.5 145 34.5
MD15G1005500 Malus domestica HOM05D000151 ORTHO05D000074 3.2e-07 60.5 414 26.1
Hma1.2p1_0112F.1_g054880 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 5.4e-07 59.7 205 27.8
RcHm_v2.0_Chr4g0393391 Rosa chinensis HOM05D007346 ORTHO05D009044 5.4e-07 59.7 214 27.1
Haze_03477 Corylus avellana HOM05D000151 ORTHO05D000074 7.0e-07 59.3 387 23.3
FAN15G3747 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.6e-06 58.2 95 34.7
Eucgr.E02334 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.0e-06 57.8 331 24.5
FvH4_2g21230 Fragaria vesca HOM05D000151 ORTHO05D000074 2.0e-06 57.8 238 30.3
MD08G1006100 Malus domestica HOM05D000151 ORTHO05D000074 2.0e-06 57.8 418 26.1
Thecc.07G029900 Theobroma cacao HOM05D001286 ORTHO05D000440 2.7e-06 57.4 211 25.6
Cfa007811 Carpinus fangiana HOM05D001286 ORTHO05D000440 3.5e-06 57.0 189 31.2
Manes.07G048800 Manihot esculenta HOM05D000151 ORTHO05D000074 3.5e-06 57.0 194 27.3
FAN02G2364 Fragaria x ananassa HOM05D011252 ORTHO05D029353 4.6e-06 56.6 191 28.3
FAN14G2254 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.6e-06 56.6 80 43.8
Haze_14264 Corylus avellana HOM05D001286 ORTHO05D000440 6.0e-06 56.2 182 30.8
FAN28G1502 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.8e-06 55.8 108 33.3


User provided reference genes

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