Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_6g51400 Fragaria vesca HOM05D005182 ORTHO05D006631 4.6e-76 287.7 136 100.0
FAN14G1378 Fragaria x ananassa HOM05D005182 ORTHO05D006631 4.6e-76 287.7 136 100.0
RcHm_v2.0_Chr2g0173081 Rosa chinensis HOM05D005182 ORTHO05D006631 2.7e-52 208.8 124 80.6
FAN21G0797 Fragaria x ananassa HOM05D005182 ORTHO05D006631 1.3e-51 206.5 124 79.8
MD17G1030300 Malus domestica HOM05D005182 ORTHO05D006631 6.6e-51 204.1 124 76.6
FvH4_3g28470 Fragaria vesca HOM05D005182 ORTHO05D006631 1.5e-50 203.0 124 79.8
FAN11G2673 Fragaria x ananassa HOM05D005182 ORTHO05D006631 1.5e-50 203.0 124 79.8
Prupe.3G289500 Prunus persica HOM05D005182 ORTHO05D006631 2.4e-48 195.7 124 75.8
MD09G1028700 Malus domestica HOM05D005182 ORTHO05D006631 2.9e-46 188.7 124 72.6
DCAR_011246 Daucus carota HOM05D005182 ORTHO05D006631 6.4e-46 187.6 124 71.8
RcHm_v2.0_Chr7g0219921 Rosa chinensis HOM05D005182 ORTHO05D006631 8.4e-46 187.2 126 73.0
ECA246G2600 Erigeron canadensis HOM05D005182 ORTHO05D006631 1.6e-44 183.0 123 69.9
GSVIVG01032428001 Vitis vinifera HOM05D005182 ORTHO05D006631 6.0e-44 181.0 124 67.7
Aqoxy3G02839 Aquilegia oxysepala HOM05D005182 ORTHO05D006631 7.9e-44 180.6 124 69.4
Nn3g16771 Nelumbo nucifera HOM05D005182 ORTHO05D006631 7.9e-44 180.6 123 66.7
MBI16_g14596_MAGBIO Magnolia biondii HOM05D005182 ORTHO05D006631 1.3e-43 179.9 124 68.5
Potri.001G178800 Populus trichocarpa HOM05D005182 ORTHO05D006631 1.8e-43 179.5 124 67.7
VMungo0464G0237 Vigna mungo HOM05D005182 ORTHO05D006631 1.8e-43 179.5 124 67.7
Lj2g0004707 Lotus japonicus HOM05D005182 ORTHO05D006631 2.3e-43 179.1 124 66.9
Medtr6g005390 Medicago truncatula HOM05D005182 ORTHO05D006631 2.3e-43 179.1 123 66.7
TWI12G0687 Tripterygium wilfordii HOM05D005182 ORTHO05D006631 2.3e-43 179.1 124 68.5
Glyma.05G004900 Glycine max HOM05D005182 ORTHO05D006631 3.0e-43 178.7 124 68.5
TPR.G14069 Trifolium pratense HOM05D005182 ORTHO05D006631 3.0e-43 178.7 123 67.5
Manes.17G115200 Manihot esculenta HOM05D005182 ORTHO05D006631 3.9e-43 178.3 124 66.9
Cfa007391 Carpinus fangiana HOM05D005182 ORTHO05D006631 5.1e-43 177.9 124 67.7
Phvul.004G010800 Phaseolus vulgaris HOM05D005182 ORTHO05D006631 5.1e-43 177.9 123 66.7
Sabra01G0148000 Salix brachista HOM05D005182 ORTHO05D006631 5.1e-43 177.9 124 66.9
Actinidia06755 Actinidia chinensis HOM05D005182 ORTHO05D006631 8.7e-43 177.2 124 66.9
CAN.G1799.12 Capsicum annuum HOM05D005182 ORTHO05D006631 8.7e-43 177.2 122 68.9
CiPaw.02G035100 Carya illinoinensis HOM05D005182 ORTHO05D006631 8.7e-43 177.2 124 67.7
Nitab4.5_0002682g0020 Nicotiana tabacum HOM05D005182 ORTHO05D006631 8.7e-43 177.2 122 68.0
PGR024G0002 Punica granatum HOM05D005182 ORTHO05D006631 8.7e-43 177.2 124 68.5
PGR142G3360 Punica granatum HOM05D005182 ORTHO05D006631 8.7e-43 177.2 124 66.9
HanXRQChr17g0548351 Helianthus annuus HOM05D005182 ORTHO05D006631 1.1e-42 176.8 123 68.3
Solyc02g086560.3 Solanum lycopersicum HOM05D005182 ORTHO05D006631 1.1e-42 176.8 122 68.0
Peaxi162Scf00129g01422 Petunia axillaris HOM05D005182 ORTHO05D006631 1.5e-42 176.4 122 68.9
TAR629G2348 Trochodendron aralioides HOM05D005182 ORTHO05D006631 1.5e-42 176.4 124 66.9
PGSC0003DMG400000477 Solanum tuberosum HOM05D005182 ORTHO05D006631 2.5e-42 175.6 122 67.2
Thecc.04G015200 Theobroma cacao HOM05D005182 ORTHO05D006631 2.5e-42 175.6 124 67.7
COL.COLO4_29086 Corchorus olitorius HOM05D005182 ORTHO05D006631 3.3e-42 175.3 124 65.3
Haze_14718 Corylus avellana HOM05D005182 ORTHO05D006631 3.3e-42 175.3 124 67.7
Nitab4.5_0005432g0010 Nicotiana tabacum HOM05D005182 ORTHO05D006631 3.3e-42 175.3 122 67.2
Ca_04172_v3 Cicer arietinum L. HOM05D005182 ORTHO05D006631 5.6e-42 174.5 123 66.7
Peaxi162Scf00304g01217 Petunia axillaris HOM05D005182 ORTHO05D006631 5.6e-42 174.5 122 68.0
QL02p075210 Quercus lobata HOM05D005182 ORTHO05D006631 7.4e-42 174.1 123 66.7
Sopen02g031300 Solanum pennellii HOM05D005182 ORTHO05D006631 9.6e-42 173.7 122 67.2
Atru.chr6.2358 Acer truncatum HOM05D005182 ORTHO05D006631 1.3e-41 173.3 123 66.7
Cpa.g.c28071.2 Carica papaya HOM05D005182 ORTHO05D006631 1.6e-41 172.9 121 67.8
Dinv35097 Davidia involucrata HOM05D005182 ORTHO05D006631 1.6e-41 172.9 124 62.9
SGA_v2.0_scaffold481G52321 Striga asiatica HOM05D005182 ORTHO05D006631 1.6e-41 172.9 122 64.8
Psat1g190920 Pisum sativum HOM05D005182 ORTHO05D006631 2.1e-41 172.6 123 65.0
Gohir.A07G222400 Gossypium hirsutum HOM05D005182 ORTHO05D006631 2.8e-41 172.2 123 65.0
Hma1.2p1_1291F.1_g273570 Hydrangea macrophylla HOM05D005182 ORTHO05D006631 2.8e-41 172.2 123 63.4
Oeu057055.1 Olea europaea HOM05D005182 ORTHO05D006631 2.8e-41 172.2 123 63.4
CANSAT64G2419 Cannabis sativa HOM05D005182 ORTHO05D006631 3.7e-41 171.8 124 63.7
Cc07_g01870 Coffea canephora HOM05D005182 ORTHO05D006631 3.7e-41 171.8 123 64.2
Ciclev10016757m.g Citrus clementina HOM05D005182 ORTHO05D006631 4.8e-41 171.4 123 65.0
Eucgr.J02232 Eucalyptus grandis HOM05D005182 ORTHO05D006631 4.8e-41 171.4 124 64.5
MELO3C021568.2 Cucumis melo HOM05D005182 ORTHO05D006631 6.2e-41 171.0 124 63.7
AUR62024784 Chenopodium quinoa HOM05D005182 ORTHO05D006631 8.1e-41 170.6 121 64.5
AUR62032437 Chenopodium quinoa HOM05D005182 ORTHO05D006631 8.1e-41 170.6 121 64.5
RcHm_v2.0_Chr1g0351301 Rosa chinensis HOM05D005182 ORTHO05D006631 1.1e-40 170.2 124 69.4
SalBow1G7073 Salvia bowleyana HOM05D005182 ORTHO05D006631 1.1e-40 170.2 123 65.0
Gohir.D07G229100 Gossypium hirsutum HOM05D005182 ORTHO05D006631 1.8e-40 169.5 123 63.4
Gorai.001G264200 Gossypium raimondii HOM05D005182 ORTHO05D006631 1.8e-40 169.5 123 63.4
vmacro04855 Vaccinium macrocarpon HOM05D005182 ORTHO05D006631 4.0e-40 168.3 127 66.1
Aa31LG10G4000 Aethionema arabicum HOM05D005182 ORTHO05D006631 6.9e-40 167.5 123 63.4
CiPaw.02G035200 Carya illinoinensis HOM05D005182 ORTHO05D006631 6.9e-40 167.5 97 76.3
CARHR040200 Cardamine hirsuta HOM05D005182 ORTHO05D006631 1.2e-39 166.8 123 62.6
CsaV3_5G027220 Cucumis sativus L. HOM05D005182 ORTHO05D006631 1.5e-39 166.4 124 62.1
ATR0661G518 Amborella trichopoda HOM05D005182 ORTHO05D006631 2.0e-39 166.0 121 62.8
Cfa007386 Carpinus fangiana HOM05D005182 ORTHO05D006631 2.6e-39 165.6 114 69.3
THA.LOC104807109 Tarenaya hassleriana HOM05D005182 ORTHO05D006631 2.6e-39 165.6 123 61.8
THA.LOC104801894 Tarenaya hassleriana HOM05D005182 ORTHO05D006631 3.4e-39 165.2 123 61.0
EL10Ac2g02464 Beta vulgaris HOM05D005182 ORTHO05D006631 4.5e-39 164.9 121 62.8
AL1G57790 Arabidopsis lyrata HOM05D005182 ORTHO05D006631 5.8e-39 164.5 123 61.8
Carub.0001s3930 Capsella rubella HOM05D005182 ORTHO05D006631 7.6e-39 164.1 123 61.8
A08p03300 Brassica napus HOM05D005182 ORTHO05D006631 1.3e-38 163.3 123 61.0
Sp1g37040 Schrenkiella parvula HOM05D005182 ORTHO05D006631 1.3e-38 163.3 123 61.8
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 1.7e-38 162.9 114 68.4
AT1G50170 Arabidopsis thaliana HOM05D005182 ORTHO05D006631 3.8e-38 161.8 123 61.0
unitig_746.g26550 Utricularia gibba HOM05D005182 ORTHO05D006631 3.8e-38 161.8 123 60.2
Thhalv10011756m.g Eutrema salsugineum HOM05D005182 ORTHO05D006631 4.9e-38 161.4 123 61.0
C03p89510 Brassica napus HOM05D005182 ORTHO05D006631 1.4e-37 159.8 123 60.2
BolC3t21265H Brassica oleracea HOM05D005182 ORTHO05D006631 1.4e-37 159.8 123 60.2
BraA08t32363Z Brassica rapa HOM05D005182 ORTHO05D006631 1.4e-37 159.8 123 60.2
Medtr6g005410 Medicago truncatula HOM05D005182 ORTHO05D006631 1.9e-37 159.5 122 59.8
Zm00001eb072570 Zea mays HOM05D005182 ORTHO05D006631 2.4e-37 159.1 123 58.5
Sed0010591 Sechium edule HOM05D005182 ORTHO05D006631 5.5e-37 157.9 124 59.7
Migut.H00088 Erythranthe guttata HOM05D005182 ORTHO05D006631 7.1e-37 157.5 123 63.4
CDE06G0683 Ceratophyllum demersum HOM05D005182 ORTHO05D006631 1.2e-36 156.8 124 58.1
arahy.Tifrunner.gnm1.ann1.0YQ56L Arachis hypogaea HOM05D005182 ORTHO05D006631 1.6e-36 156.4 159 50.9
Rhsim02G0095200 Rhododendron simsii HOM05D005182 ORTHO05D006631 1.0e-35 153.7 145 55.2
QL09p000526 Quercus lobata HOM05D005182 ORTHO05D006631 1.3e-35 153.3 93 72.0
Os02g0296800 Oryza sativa ssp. japonica HOM05D005182 ORTHO05D006631 6.7e-35 151.0 95 67.4
Psat1g058400 Pisum sativum HOM05D005182 ORTHO05D006631 1.1e-34 150.2 121 57.0
Duzib187G0244 Durio zibethinus HOM05D005182 ORTHO05D006631 7.4e-34 147.5 106 65.1
arahy.Tifrunner.gnm1.ann1.1JMX4I Arachis hypogaea HOM05D005182 ORTHO05D006631 4.8e-33 144.8 123 58.5
BcaC01g01215 Brassica carinata HOM05D005182 ORTHO05D006631 6.2e-33 144.4 94 64.9
SMO356G0462 Selaginella moellendorffii HOM05D005182 ORTHO05D006631 1.4e-32 143.3 121 52.9
arahy.Tifrunner.gnm1.ann1.NIKC7C Arachis hypogaea HOM05D005182 ORTHO05D006631 2.4e-32 142.5 102 66.7
CiPaw.03G042000 Carya illinoinensis HOM05D005182 ORTHO05D006631 6.9e-32 141.0 124 58.1
Rhsim09G0149800 Rhododendron simsii HOM05D005182 ORTHO05D006631 4.5e-31 138.3 131 55.0
Psat1g058360 Pisum sativum HOM05D005182 ORTHO05D006631 1.7e-30 136.3 122 50.8
Sed0025592 Sechium edule HOM05D005182 ORTHO05D006631 1.7e-30 136.3 123 55.3
ClCG00G002150 Citrullus lanatus HOM05D005182 ORTHO05D006631 4.9e-30 134.8 124 54.8
ClCG09G019170 Citrullus lanatus HOM05D005182 ORTHO05D006631 4.9e-30 134.8 124 54.8
Pp3c3_11190 Physcomitrium patens HOM05D005182 ORTHO05D006631 1.4e-29 133.3 121 51.2
Prupe.3G289700 Prunus persica HOM05D005182 ORTHO05D006631 7.1e-29 131.0 75 78.7
SHI25748 Sapria himalayana HOM05D005182 ORTHO05D006631 7.1e-29 131.0 121 55.4
CBR_g4824 Chara braunii HOM05D005182 ORTHO05D006631 3.5e-28 128.6 119 49.6
AagrBONN_evm.TU.Sc2ySwM_228.389 Anthoceros agrestis HOM05D005182 ORTHO05D006631 4.6e-28 128.3 93 55.9
Hund03875 Selenicereus undatus HOM05D005182 ORTHO05D006631 1.9e-26 122.9 90 64.4
MSTRG.3153 Avicennia marina HOM05D005182 ORTHO05D006631 4.3e-26 121.7 90 65.6
MCO08G118 Micromonas commoda HOM05D005182 ORTHO05D006631 3.7e-25 118.6 117 47.9
arahy.Tifrunner.gnm1.ann1.C5A6Z1 Arachis hypogaea HOM05D005182 ORTHO05D006631 6.3e-25 117.9 123 48.8
Prupe.3G207400 Prunus persica HOM05D005182 ORTHO05D006631 1.8e-24 116.3 91 68.1
CSS0002021 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 5.3e-24 114.8 90 63.3
Cpa.g.sc130.27 Carica papaya HOM05D005182 ORTHO05D006631 4.5e-23 111.7 88 63.6
Dinv33456 Davidia involucrata HOM05D005182 ORTHO05D006631 4.5e-23 111.7 90 61.1
SEGI_02514 Sequoiadendron giganteum HOM05D005182 ORTHO05D006631 5.9e-23 111.3 95 58.9
Ah.12g060430 Amaranthus hybridus HOM05D005182 ORTHO05D006631 2.1e-20 102.8 122 44.3
Mapoly0034s0026 Marchantia polymorpha HOM05D005182 ORTHO05D006631 2.7e-20 102.4 90 54.4
Cpa.g.sc171.39 Carica papaya HOM05D005182 ORTHO05D006631 3.6e-20 102.1 63 71.4
Hund04415 Selenicereus undatus HOM05D005182 ORTHO05D006631 4.6e-20 101.7 63 69.8
Cpa.g.sc130.26 Carica papaya HOM05D005182 ORTHO05D006631 1.0e-19 100.5 88 58.0
Glyma.17G203751 Glycine max HOM05D005182 ORTHO05D006631 5.1e-19 98.2 85 55.3
Ah.15g100150 Amaranthus hybridus HOM05D008863 ORTHO05D006631 6.7e-19 97.8 65 64.6
RcHm_v2.0_Chr7g0228061 Rosa chinensis HOM05D005182 ORTHO05D006631 7.4e-18 94.4 74 62.2
Sc19g0005880 Simmondsia chinensis HOM05D005182 ORTHO05D006631 1.3e-17 93.6 122 41.0
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 4.1e-16 88.6 98 44.9
Cpa.g.c30633.2 Carica papaya HOM05D005182 ORTHO05D006631 2.9e-14 82.4 58 62.1
FAN05G5577 Fragaria x ananassa HOM05D005182 ORTHO05D006631 5.0e-14 81.6 64 64.1
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 1.1e-13 80.5 51 68.6
PRCOL_00005828 Prasinoderma coloniale HOM05D005182 ORTHO05D006631 1.4e-13 80.1 74 45.9
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 3.6e-12 75.5 54 61.1
Cre04.g214100 Chlamydomonas reinhardtii HOM05D005182 ORTHO05D006631 1.0e-11 73.9 110 33.6
RcHm_v2.0_Chr7g0228091 Rosa chinensis HOM05D005182 ORTHO05D344069 6.7e-11 71.2 96 43.8
MSTRG.15523 Avicennia marina HOM05D005182 ORTHO05D006631 2.2e-09 66.2 58 56.9
Dinv33459 Davidia involucrata HOM05D005182 ORTHO05D006631 3.8e-06 55.5 31 71.0


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