Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G0966 Fragaria x ananassa HOM05D002035 ORTHO05D002032 1.1e-119 433.3 213 100.0
FAN02G1724 Fragaria x ananassa HOM05D002035 ORTHO05D002032 6.1e-51 204.9 216 58.8
FAN14G5962 Fragaria x ananassa HOM05D002035 ORTHO05D002032 7.2e-36 154.8 102 77.5
Prupe.3G075500 Prunus persica HOM05D002035 ORTHO05D002032 5.6e-12 75.5 128 37.5
QL05p025724 Quercus lobata HOM05D002035 ORTHO05D002032 1.8e-10 70.5 82 43.9
Potri.001G176800 Populus trichocarpa HOM05D002035 ORTHO05D002032 5.2e-10 68.9 83 42.2
Nn2g11853 Nelumbo nucifera HOM05D002035 ORTHO05D002032 1.5e-09 67.4 83 45.8
Dinv36594 Davidia involucrata HOM05D002035 ORTHO05D002032 3.4e-09 66.2 81 43.2
Duzib192G0363 Durio zibethinus HOM05D002035 ORTHO05D002032 3.7e-08 62.8 82 43.9
CSS0016789 Camellia sinensis var. sinensis HOM05D002035 ORTHO05D002032 4.9e-08 62.4 49 53.1
Lj9A505T67 Lonicera japonica HOM05D002035 ORTHO05D002032 4.9e-08 62.4 42 59.5
Thecc.06G081100 Theobroma cacao HOM05D002035 ORTHO05D002032 4.9e-08 62.4 44 56.8
CiPaw.01G241400 Carya illinoinensis HOM05D002035 ORTHO05D002032 6.4e-08 62.0 86 38.4
Gohir.D05G127600 Gossypium hirsutum HOM05D002035 ORTHO05D002032 6.4e-08 62.0 44 56.8
Gorai.009G131700 Gossypium raimondii HOM05D002035 ORTHO05D002032 6.4e-08 62.0 44 56.8
Actinidia08824 Actinidia chinensis HOM05D002035 ORTHO05D002032 8.3e-08 61.6 44 56.8
Migut.I00835 Erythranthe guttata HOM05D002035 ORTHO05D002032 1.1e-07 61.2 83 37.3
CAN.G438.100 Capsicum annuum HOM05D002035 ORTHO05D002032 1.4e-07 60.8 83 37.3
Lj7A639T57 Lonicera japonica HOM05D002035 ORTHO05D002032 2.4e-07 60.1 86 34.9
Manes.11G050600 Manihot esculenta HOM05D002035 ORTHO05D002032 2.4e-07 60.1 44 54.5
ATR0083G065 Amborella trichopoda HOM05D002035 ORTHO05D002032 3.2e-07 59.7 86 38.4
Gohir.A05G126700 Gossypium hirsutum HOM05D002035 ORTHO05D002032 3.2e-07 59.7 44 54.5
COL.COLO4_30316 Corchorus olitorius HOM05D002035 ORTHO05D002032 4.1e-07 59.3 42 54.8
Gohir.A08G240401 Gossypium hirsutum HOM05D002035 ORTHO05D002032 4.1e-07 59.3 44 59.1
Potri.003G057700 Populus trichocarpa HOM05D002035 ORTHO05D002032 5.4e-07 58.9 42 57.1
Ciclev10026432m.g Citrus clementina HOM05D002035 ORTHO05D002032 7.1e-07 58.5 85 41.2
Atru.chr1.3215 Acer truncatum HOM05D002035 ORTHO05D002032 1.6e-06 57.4 81 32.1
Atru.chr1.3213 Acer truncatum HOM05D002035 ORTHO05D002032 2.1e-06 57.0 83 36.1
Phvul.010G152100 Phaseolus vulgaris HOM05D002035 ORTHO05D002032 3.5e-06 56.2 82 41.5
DCAR_011278 Daucus carota HOM05D002035 ORTHO05D002032 4.6e-06 55.8 50 48.0
MBI05_g12591_MAGBIO Magnolia biondii HOM05D002035 ORTHO05D002032 4.6e-06 55.8 82 32.9
PSO063G6019 Papaver somniferum HOM05D002035 ORTHO05D002032 4.6e-06 55.8 83 36.1
Manes.04G120300 Manihot esculenta HOM05D002035 ORTHO05D002032 7.8e-06 55.1 44 50.0


User provided reference genes

Program Settings