Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G0765 Fragaria x ananassa HOM05D008222 ORTHO05D010364 0.0e+00 1177.9 631 100.0
FvH4_6g19810 Fragaria vesca HOM05D008222 ORTHO05D010364 0.0e+00 1140.6 620 99.0
FAN05G0526 Fragaria x ananassa HOM05D008222 ORTHO05D010364 2.4e-305 1051.6 620 92.7
FAN02G2041 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.1e-302 1042.7 620 92.7
FAN05G0780 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.2e-301 1039.3 620 91.8
FAN09G4126 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.1e-292 1009.6 620 90.6
RcHm_v2.0_Chr3g0475181 Rosa chinensis HOM05D008222 ORTHO05D010364 1.8e-247 859.4 620 79.8
Haze_19673 Corylus avellana HOM05D008222 ORTHO05D010364 2.9e-117 426.8 699 45.4
Cfa016663 Carpinus fangiana HOM05D008222 ORTHO05D010364 2.1e-115 420.6 697 44.0
QL07p037571 Quercus lobata HOM05D008222 ORTHO05D010364 1.4e-114 417.9 704 46.2
Dinv31739 Davidia involucrata HOM05D008222 ORTHO05D010364 3.2e-108 396.7 705 43.8
Thecc.05G099900 Theobroma cacao HOM05D008222 ORTHO05D010364 2.7e-102 377.1 700 39.6
CiPaw.10G014900 Carya illinoinensis HOM05D008222 ORTHO05D010364 6.5e-101 372.5 686 42.6
COL.COLO4_29620 Corchorus olitorius HOM05D008222 ORTHO05D010364 4.7e-99 366.3 695 42.3
MD12G1033800 Malus domestica HOM05D008222 ORTHO05D010364 8.3e-96 355.5 591 45.3
TAR633G2678 Trochodendron aralioides HOM05D008222 ORTHO05D010364 1.8e-95 354.4 715 42.8
Manes.09G049300 Manihot esculenta HOM05D008222 ORTHO05D010364 5.4e-95 352.8 701 40.2
TAR636G2750 Trochodendron aralioides HOM05D008222 ORTHO05D010364 5.0e-93 346.3 707 43.4
Cpa.g.sc104.69 Carica papaya HOM05D008222 ORTHO05D010364 9.5e-92 342.0 706 39.0
Potri.006G205800 Populus trichocarpa HOM05D008222 ORTHO05D010364 2.8e-91 340.5 695 41.2
GSVIVG01033924001 Vitis vinifera HOM05D008222 ORTHO05D010364 6.3e-88 329.3 672 40.5
Ciclev10011213m.g Citrus clementina HOM05D008222 ORTHO05D010364 1.1e-87 328.6 698 40.4
CANSAT64G2035 Cannabis sativa HOM05D008222 ORTHO05D010364 1.8e-87 327.8 754 38.3
CSS0016714 Camellia sinensis var. sinensis HOM05D008222 ORTHO05D010364 2.7e-86 323.9 727 40.2
Atru.chr8.1411 Acer truncatum HOM05D008222 ORTHO05D010364 8.6e-85 318.9 741 35.4
Sabra06G0158800 Salix brachista HOM05D008222 ORTHO05D010364 1.6e-83 314.7 695 40.4
Glyma.02G200000 Glycine max HOM05D008222 ORTHO05D010364 4.4e-81 306.6 684 38.6
Lj5g0010690 Lotus japonicus HOM05D008222 ORTHO05D010364 3.7e-80 303.5 698 40.5
Nn6g34773 Nelumbo nucifera HOM05D008222 ORTHO05D010364 3.9e-77 293.5 702 38.0
Lj1C1035T2 Lonicera japonica HOM05D008222 ORTHO05D010364 1.1e-74 285.4 663 35.3
TWI77G0950 Tripterygium wilfordii HOM05D008222 ORTHO05D010364 1.4e-74 285.0 715 35.1
MBI17_g16777_MAGBIO Magnolia biondii HOM05D008222 ORTHO05D010364 1.8e-74 284.6 686 41.1
Oeu060355.1 Olea europaea HOM05D008222 ORTHO05D010364 1.1e-71 275.4 679 35.1
DCAR_020725 Daucus carota HOM05D008222 ORTHO05D010364 1.0e-69 268.9 709 31.6
Glyma.10G076700 Glycine max HOM05D008222 ORTHO05D010364 3.0e-69 267.3 691 38.1
TPR.G8743 Trifolium pratense HOM05D008222 ORTHO05D010364 4.0e-66 256.9 686 33.5
VMungo0720G0042 Vigna mungo HOM05D008222 ORTHO05D010364 4.0e-66 256.9 660 35.3
Phvul.007G270200 Phaseolus vulgaris HOM05D008222 ORTHO05D010364 5.2e-66 256.5 652 35.3
Oeu010753.1 Olea europaea HOM05D008222 ORTHO05D010364 1.2e-65 255.4 672 30.7
Oeu010756.1 Olea europaea HOM05D008222 ORTHO05D010364 1.4e-63 248.4 654 31.3
Medtr1g058110 Medicago truncatula HOM05D008222 ORTHO05D010364 2.7e-62 244.2 686 39.1
MSTRG.10386 Avicennia marina HOM05D008222 ORTHO05D010364 1.3e-61 241.9 683 31.2
CiPaw.09G018200 Carya illinoinensis HOM05D008222 ORTHO05D010364 2.3e-61 241.1 576 37.5
AUR62006264 Chenopodium quinoa HOM05D008222 ORTHO05D010364 3.5e-54 217.2 720 28.6
Hund03869 Selenicereus undatus HOM05D008222 ORTHO05D010364 4.3e-52 210.3 773 31.6
Sc20g0006580 Simmondsia chinensis HOM05D008222 ORTHO05D010364 5.8e-49 199.9 669 35.9
EL10Ac7g16820 Beta vulgaris HOM05D008222 ORTHO05D010364 2.4e-47 194.5 812 31.7
AUR62028514 Chenopodium quinoa HOM05D008222 ORTHO05D010364 2.4e-47 194.5 828 28.5
CDE08G0440 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 8.1e-43 179.5 631 35.3
Aqoxy4G02694 Aquilegia oxysepala HOM05D008222 ORTHO05D010364 1.4e-42 178.7 719 32.0
CDE06G1815 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 1.4e-42 178.7 619 33.9
SGA_v2.0_scaffold184G40000 Striga asiatica HOM05D008222 ORTHO05D010364 2.6e-41 174.5 622 27.3
HPP92_009786 Vanilla planifolia HOM05D008222 ORTHO05D010364 1.3e-40 172.2 692 34.2
Oeu010754.1 Olea europaea HOM05D008222 ORTHO05D010364 4.3e-36 157.1 472 29.4
ECA233G4923 Erigeron canadensis HOM05D008222 ORTHO05D010364 9.3e-31 139.4 320 32.2
Os02g0536400 Oryza sativa ssp. japonica HOM05D008222 ORTHO05D010364 9.3e-31 139.4 691 25.9
ATR0772G019 Amborella trichopoda HOM05D008222 ORTHO05D010364 3.8e-24 117.5 719 27.8
SEGI_05246 Sequoiadendron giganteum HOM05D008222 ORTHO05D010364 5.1e-21 107.1 760 22.4
unitig_8.g3557 Utricularia gibba HOM05D008222 ORTHO05D010364 3.3e-20 104.4 119 45.4
Lalb_Chr02g0154681 Lupinus albus HOM05D008222 ORTHO05D010364 1.7e-16 92.0 223 34.1
Psat6g082000 Pisum sativum HOM05D008222 ORTHO05D010364 1.5e-12 79.0 113 39.8
AagrBONN_evm.TU.Sc2ySwM_368.1895 Anthoceros agrestis HOM05D008222 ORTHO05D010364 5.3e-10 70.5 53 58.5
Oeu017707.1 Olea europaea HOM05D008222 ORTHO05D010364 2.5e-07 61.6 88 43.2
Sabra16G0076100 Salix brachista HOM05D008222 ORTHO05D010364 1.2e-06 59.3 107 34.6


User provided reference genes

Program Settings