Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.5e-175 619.4 311 100.0
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 7.2e-101 371.3 192 95.3
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 7.2e-101 371.3 192 95.3
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 4.7e-100 368.6 192 94.3
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 3.5e-87 325.9 190 82.1
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 1.8e-83 313.5 197 78.2
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 6.8e-83 311.6 197 77.7
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 4.4e-82 308.9 180 79.4
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 5.3e-80 302.0 197 76.1
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 3.8e-78 295.8 186 72.0
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 4.0e-75 285.8 189 70.9
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 5.2e-75 285.4 190 70.5
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 1.3e-73 280.8 192 71.4
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 4.9e-73 278.9 180 75.0
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 4.9e-73 278.9 200 66.5
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 1.1e-72 277.7 197 66.5
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 1.4e-72 277.3 177 74.0
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 1.8e-72 276.9 181 72.4
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 2.4e-72 276.6 233 59.2
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 9.1e-72 274.6 192 66.7
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 1.6e-71 273.9 182 69.8
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 3.5e-71 272.7 193 68.9
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 5.9e-71 271.9 182 69.2
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 5.9e-71 271.9 191 66.5
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 5.9e-71 271.9 192 65.1
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 5.9e-71 271.9 192 65.1
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 5.9e-71 271.9 190 67.4
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 1.7e-70 270.4 193 69.4
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 1.7e-70 270.4 192 64.6
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 2.9e-70 269.6 191 65.4
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 3.8e-70 269.2 195 65.6
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 5.0e-70 268.9 194 67.0
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 6.6e-70 268.5 197 63.5
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 8.6e-70 268.1 193 67.4
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 1.9e-69 266.9 193 68.9
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 2.5e-69 266.5 186 68.3
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 3.3e-69 266.2 185 65.9
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 3.3e-69 266.2 199 64.3
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 4.2e-69 265.8 185 66.5
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 4.2e-69 265.8 186 66.1
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 5.5e-69 265.4 205 62.0
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 7.2e-69 265.0 185 67.0
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 7.2e-69 265.0 187 66.3
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 2.8e-68 263.1 186 67.2
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 4.7e-68 262.3 193 66.3
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 4.7e-68 262.3 193 65.8
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 6.1e-68 261.9 194 63.9
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 1.8e-67 260.4 188 64.4
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 1.8e-67 260.4 184 66.3
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.0e-67 259.6 208 69.2
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 5.2e-67 258.8 185 67.6
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 5.2e-67 258.8 179 67.6
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 2.6e-66 256.5 194 63.9
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 3.4e-66 256.1 208 61.5
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 7.5e-66 255.0 185 65.9
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 9.8e-66 254.6 186 62.9
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 1.3e-65 254.2 180 64.4
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 1.7e-65 253.8 194 63.4
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 4.9e-65 252.3 189 62.4
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 6.3e-65 251.9 182 64.3
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 1.4e-64 250.8 186 65.1
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 2.4e-64 250.0 183 62.8
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 4.1e-64 249.2 182 63.2
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 5.4e-64 248.8 185 62.2
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 1.2e-63 247.7 185 61.6
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 1.6e-63 247.3 185 60.5
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.6e-63 247.3 197 58.9
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 2.0e-63 246.9 194 62.9
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 2.0e-63 246.9 183 61.7
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 2.7e-63 246.5 186 61.8
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 2.7e-63 246.5 186 61.8
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 3.5e-63 246.1 185 61.1
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 3.5e-63 246.1 186 64.5
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 4.6e-63 245.7 178 63.5
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 1.0e-62 244.6 195 58.5
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 1.7e-62 243.8 188 61.7
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 1.7e-62 243.8 179 59.2
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 3.9e-62 242.7 207 58.5
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 2.5e-61 240.0 193 62.2
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 7.3e-61 238.4 197 57.9
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 1.2e-60 237.7 195 56.9
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 2.3e-59 233.4 178 60.7
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 4.4e-58 229.2 173 62.4
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 2.4e-56 223.4 142 69.0
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 7.0e-56 221.9 135 68.9
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.6e-55 220.7 210 51.4
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 3.0e-54 216.5 170 59.4
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 9.5e-53 211.5 109 97.2
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 9.5e-53 211.5 165 60.0
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 2.6e-50 203.4 148 62.8
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 2.2e-49 200.3 164 62.2
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 1.6e-47 194.1 193 52.8
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.7e-47 193.4 131 75.6
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 3.2e-40 169.9 185 51.9
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 2.7e-39 166.8 162 50.0
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 1.7e-38 164.1 150 54.0
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 6.6e-38 162.2 184 48.4
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 8.9e-35 151.8 119 55.5
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 1.1e-29 134.8 106 58.5
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 3.6e-28 129.8 115 52.2
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 7.1e-24 115.5 69 73.9
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 7.1e-24 115.5 165 35.8
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 2.7e-23 113.6 169 38.5
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 3.0e-22 110.2 151 42.4
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 3.4e-18 96.7 86 57.0
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 2.2e-17 94.0 56 73.2
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 4.9e-17 92.8 73 64.4
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 7.9e-15 85.5 97 53.6
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 7.9e-15 85.5 49 69.4
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 2.5e-13 80.5 67 62.7
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 2.4e-11 73.9 54 72.2
FAN06G0227 Fragaria x ananassa HOM05D006529 ORTHO05D201711 1.4e-08 64.7 41 78.0
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 1.4e-08 64.7 45 64.4
FAN21G2291 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.1e-08 62.4 30 100.0
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 6.0e-07 59.3 73 41.1
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 6.7e-06 55.8 34 70.6


User provided reference genes

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