Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G0582 Fragaria x ananassa HOM05D005617 ORTHO05D006847 2.1e-155 552.4 283 100.0
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.3e-152 543.1 282 98.9
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.4e-151 539.7 282 98.6
RcHm_v2.0_Chr3g0449811 Rosa chinensis HOM05D005617 ORTHO05D006847 1.6e-144 516.2 283 91.9
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 5.3e-143 511.1 262 98.5
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.5e-129 466.5 241 98.3
FvH4_6g01960 Fragaria vesca HOM05D005617 ORTHO05D006847 3.3e-129 465.3 240 97.9
Prupe.6G349300 Prunus persica HOM05D005617 ORTHO05D006847 7.2e-124 447.6 283 78.1
MD17G1278900 Malus domestica HOM05D005617 ORTHO05D006847 4.7e-123 444.9 283 77.7
MD09G1286500 Malus domestica HOM05D005617 ORTHO05D006847 2.3e-122 442.6 283 77.4
CANSAT54G2044 Cannabis sativa HOM05D005617 ORTHO05D006847 2.7e-107 392.5 289 72.0
CSS0012605 Camellia sinensis var. sinensis HOM05D005617 ORTHO05D006847 5.2e-106 388.3 286 66.8
QL03p030835 Quercus lobata HOM05D005617 ORTHO05D006847 1.5e-105 386.7 287 68.6
Dinv07760 Davidia involucrata HOM05D005617 ORTHO05D006847 7.5e-105 384.4 287 68.3
GSVIVG01023530001 Vitis vinifera HOM05D005617 ORTHO05D006847 9.7e-105 384.0 287 69.0
Manes.08G138800 Manihot esculenta HOM05D005617 ORTHO05D006847 1.4e-103 380.2 286 67.5
Gohir.A11G299400 Gossypium hirsutum HOM05D005617 ORTHO05D006847 1.8e-103 379.8 288 66.3
Gorai.007G345400 Gossypium raimondii HOM05D005617 ORTHO05D006847 1.8e-103 379.8 288 66.0
Gohir.D11G314200 Gossypium hirsutum HOM05D005617 ORTHO05D006847 2.4e-103 379.4 288 66.0
Thecc.05G271700 Theobroma cacao HOM05D005617 ORTHO05D006847 4.1e-103 378.6 288 66.7
Glyma.19G248200 Glycine max HOM05D005617 ORTHO05D006847 7.0e-103 377.9 284 66.9
TAR636G3199 Trochodendron aralioides HOM05D005617 ORTHO05D006847 1.2e-102 377.1 284 67.6
CiPaw.08G118100 Carya illinoinensis HOM05D005617 ORTHO05D006847 2.0e-102 376.3 285 68.1
Potri.013G046200 Populus trichocarpa HOM05D005617 ORTHO05D006847 4.5e-102 375.2 287 67.6
PGR142G1895 Punica granatum HOM05D005617 ORTHO05D006847 3.8e-101 372.1 283 65.0
VMungo0540G0455 Vigna mungo HOM05D005617 ORTHO05D006847 3.8e-101 372.1 283 66.8
Glyma.03G250700 Glycine max HOM05D005617 ORTHO05D006847 8.5e-101 370.9 284 65.8
TWI56G1032 Tripterygium wilfordii HOM05D005617 ORTHO05D006847 8.5e-101 370.9 288 65.6
Duzib177G1169 Durio zibethinus HOM05D005617 ORTHO05D006847 1.9e-100 369.8 288 65.3
Hma1.2p1_0075F.1_g039170 Hydrangea macrophylla HOM05D005617 ORTHO05D006847 1.9e-100 369.8 286 66.4
Sc06g0003230 Simmondsia chinensis HOM05D005617 ORTHO05D006847 1.9e-100 369.8 292 64.4
COL.COLO4_15469 Corchorus olitorius HOM05D005617 ORTHO05D006847 4.2e-100 368.6 253 72.3
Phvul.006G105300 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 7.2e-100 367.9 283 65.7
Ciclev10021517m.g Citrus clementina HOM05D005617 ORTHO05D006847 9.4e-100 367.5 287 66.6
Carub.0001s0800 Capsella rubella HOM05D005617 ORTHO05D006847 1.2e-99 367.1 288 66.0
CsaV3_1G036020 Cucumis sativus L. HOM05D005617 ORTHO05D006847 1.2e-99 367.1 286 66.4
CARHR008550 Cardamine hirsuta HOM05D005617 ORTHO05D006847 2.1e-99 366.3 288 67.0
Thhalv10008167m.g Eutrema salsugineum HOM05D005617 ORTHO05D006847 4.7e-99 365.2 288 65.6
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 6.1e-99 364.8 266 74.8
Lj1g0025948 Lotus japonicus HOM05D005617 ORTHO05D006847 1.8e-98 363.2 283 66.4
Sed0027621 Sechium edule HOM05D005617 ORTHO05D006847 1.8e-98 363.2 286 66.1
HanXRQChr14g0455191 Helianthus annuus HOM05D005617 ORTHO05D006847 3.4e-97 359.0 288 67.0
BraA06t23768Z Brassica rapa HOM05D005617 ORTHO05D006847 5.7e-97 358.2 289 66.1
Eucgr.B02145 Eucalyptus grandis HOM05D005617 ORTHO05D006847 5.7e-97 358.2 286 64.7
Eucgr.L02949 Eucalyptus grandis HOM05D005617 ORTHO05D006847 5.7e-97 358.2 286 64.7
Sp1g07300 Schrenkiella parvula HOM05D005617 ORTHO05D006847 5.7e-97 358.2 289 64.4
BcaC05g24795 Brassica carinata HOM05D005617 ORTHO05D006847 1.3e-96 357.1 289 65.7
BolC5t29432H Brassica oleracea HOM05D005617 ORTHO05D006847 1.3e-96 357.1 289 65.7
AUR62004851 Chenopodium quinoa HOM05D005617 ORTHO05D006847 1.3e-96 357.1 285 64.2
AL1G19070 Arabidopsis lyrata HOM05D005617 ORTHO05D006847 1.7e-96 356.7 285 65.3
Psat3g006600 Pisum sativum HOM05D005617 ORTHO05D006847 3.7e-96 355.5 284 63.0
THA.LOC104805778 Tarenaya hassleriana HOM05D005617 ORTHO05D006847 3.7e-96 355.5 291 64.6
Aqoxy2G03651 Aquilegia oxysepala HOM05D005617 ORTHO05D006847 1.4e-95 353.6 287 62.7
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 1.8e-95 353.2 251 71.3
C05p06720 Brassica napus HOM05D005617 ORTHO05D006847 3.1e-95 352.4 288 65.6
Potri.019G018300 Populus trichocarpa HOM05D005617 ORTHO05D006847 4.1e-95 352.1 270 67.0
BcaB07g34105 Brassica carinata HOM05D005617 ORTHO05D006847 1.2e-94 350.5 287 63.8
MBI10_g30078_MAGBIO Magnolia biondii HOM05D005617 ORTHO05D006847 2.0e-94 349.7 284 63.0
AT1G08640 Arabidopsis thaliana HOM05D005617 ORTHO05D006847 3.5e-94 349.0 285 64.2
Actinidia34747 Actinidia chinensis HOM05D005617 ORTHO05D006847 7.7e-94 347.8 286 61.2
MSTRG.27377 Avicennia marina HOM05D005617 ORTHO05D006847 1.0e-93 347.4 242 69.4
ECA238G4125 Erigeron canadensis HOM05D005617 ORTHO05D006847 5.0e-93 345.1 256 68.0
SalBow3G1639 Salvia bowleyana HOM05D005617 ORTHO05D006847 1.1e-92 344.0 285 62.5
PSO017G5929 Papaver somniferum HOM05D005617 ORTHO05D006847 2.5e-92 342.8 281 63.7
EL10Ac4g09040 Beta vulgaris HOM05D005617 ORTHO05D006847 4.2e-92 342.0 296 60.8
arahy.Tifrunner.gnm1.ann1.9NRB0Q Arachis hypogaea HOM05D005617 ORTHO05D006847 5.5e-92 341.7 288 62.2
arahy.Tifrunner.gnm1.ann1.X65E39 Arachis hypogaea HOM05D005617 ORTHO05D006847 5.5e-92 341.7 288 62.2
BcaB03g13320 Brassica carinata HOM05D005617 ORTHO05D006847 3.6e-91 339.0 289 64.0
Cc02_g08910 Coffea canephora HOM05D005617 ORTHO05D006847 6.1e-91 338.2 295 62.4
Lalb_Chr04g0262061 Lupinus albus HOM05D005617 ORTHO05D006847 8.0e-91 337.8 287 62.0
TPR.G6961 Trifolium pratense HOM05D005617 ORTHO05D006847 8.0e-91 337.8 282 61.7
Rhsim09G0137600 Rhododendron simsii HOM05D005617 ORTHO05D006847 4.0e-90 335.5 286 60.5
HPP92_002964 Vanilla planifolia HOM05D005617 ORTHO05D006847 1.5e-89 333.6 259 63.3
DCAR_023096 Daucus carota HOM05D005617 ORTHO05D006847 2.0e-89 333.2 257 65.0
Peaxi162Scf00135g00418 Petunia axillaris HOM05D005617 ORTHO05D006847 2.0e-89 333.2 270 64.1
A06p05600 Brassica napus HOM05D005617 ORTHO05D006847 3.4e-89 332.4 276 64.5
Migut.F00803 Erythranthe guttata HOM05D005617 ORTHO05D006847 7.5e-89 331.3 289 60.9
PSO063G2686 Papaver somniferum HOM05D005617 ORTHO05D006847 6.3e-88 328.2 282 61.7
Lj2A41G63 Lonicera japonica HOM05D005617 ORTHO05D006847 1.8e-87 326.6 254 65.0
Oeu012233.2 Olea europaea HOM05D005617 ORTHO05D006847 1.8e-87 326.6 271 63.8
CAN.G1609.4 Capsicum annuum HOM05D005617 ORTHO05D006847 5.4e-87 325.1 243 66.3
Sopen04g005070 Solanum pennellii HOM05D005617 ORTHO05D006847 5.4e-87 325.1 243 65.8
PGSC0003DMG400011501 Solanum tuberosum HOM05D005617 ORTHO05D006847 9.2e-87 324.3 240 67.1
Lsat_1_v5_gn_2_108021 Lactuca sativa HOM05D005617 ORTHO05D006847 1.2e-86 323.9 218 71.6
Solyc04g009940.4 Solanum lycopersicum HOM05D005617 ORTHO05D006847 2.0e-86 323.2 243 65.4
Aa31sc110G20 Aethionema arabicum HOM05D005617 ORTHO05D006847 4.5e-86 322.0 266 62.8
Ah.06g191860 Amaranthus hybridus HOM05D005617 ORTHO05D006847 1.5e-84 317.0 256 62.5
Nitab4.5_0003768g0040 Nicotiana tabacum HOM05D005617 ORTHO05D006847 7.3e-84 314.7 238 66.8
Haze_04439 Corylus avellana HOM05D005617 ORTHO05D006847 9.5e-84 314.3 284 61.3
Medtr7g115670 Medicago truncatula HOM05D005617 ORTHO05D006847 6.1e-83 311.6 265 60.0
Sabra13G0042400 Salix brachista HOM05D005617 ORTHO05D006847 2.2e-80 303.1 310 56.1
ATR0736G212 Amborella trichopoda HOM05D005617 ORTHO05D006847 2.9e-80 302.8 265 58.1
Nitab4.5_0003780g0030 Nicotiana tabacum HOM05D005617 ORTHO05D006847 2.9e-80 302.8 222 67.1
SEGI_39921 Sequoiadendron giganteum HOM05D005617 ORTHO05D006847 3.2e-79 299.3 265 54.7
unitig_32.g10679 Utricularia gibba HOM05D005617 ORTHO05D006847 6.0e-78 295.0 248 59.7
Hund22155 Selenicereus undatus HOM05D005617 ORTHO05D006847 1.3e-77 293.9 282 56.0
MELO3C020566.2 Cucumis melo HOM05D005617 ORTHO05D006847 8.6e-77 291.2 290 56.9
CDE04G1987 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 2.5e-76 289.7 289 57.8
Os08g0127600 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 1.6e-75 287.0 222 63.1
Zm00001eb261540 Zea mays HOM05D005617 ORTHO05D006847 5.2e-74 282.0 231 58.0
AUR62040935 Chenopodium quinoa HOM05D005617 ORTHO05D006847 1.9e-71 273.5 183 71.0
ClCG03G000920 Citrullus lanatus HOM05D005617 ORTHO05D006847 2.7e-70 269.6 238 61.3
Os10g0478100 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 8.6e-69 264.6 274 50.4
Nn1g08261 Nelumbo nucifera HOM05D005617 ORTHO05D006847 1.6e-67 260.4 238 58.4
Atru.chr2.967 Acer truncatum HOM05D005617 ORTHO05D006847 2.1e-67 260.0 175 72.0
SGA_v2.0_scaffold380G50362 Striga asiatica HOM05D005617 ORTHO05D006847 9.2e-63 244.6 334 44.0
Ca_09461_v3 Cicer arietinum L. HOM05D005617 ORTHO05D006847 4.6e-62 242.3 163 69.9
SMO116G0251 Selaginella moellendorffii HOM05D005617 ORTHO05D006847 4.6e-62 242.3 223 53.4
Mapoly0036s0041 Marchantia polymorpha HOM05D005617 ORTHO05D006847 1.6e-59 233.8 286 47.9
Zm00001eb173360 Zea mays HOM05D005617 ORTHO05D006847 7.6e-57 224.9 217 52.5
AagrBONN_evm.TU.Sc2ySwM_344.3205 Anthoceros agrestis HOM05D005617 ORTHO05D006847 9.9e-57 224.6 245 47.8
Pp3c23_15250 Physcomitrium patens HOM05D005617 ORTHO05D006847 1.6e-54 217.2 233 48.5
C08p12050 Brassica napus HOM05D005617 ORTHO05D006847 2.3e-53 213.4 237 54.0
vmacro10358 Vaccinium macrocarpon HOM05D005617 ORTHO05D006847 1.5e-52 210.7 238 47.5
Cpa.g.sc162.39 Carica papaya HOM05D005617 ORTHO05D006847 3.3e-52 209.5 168 67.3
FAN14G4186 Fragaria x ananassa HOM05D005617 ORTHO05D006847 4.4e-49 199.1 101 98.0
FAN14G5978 Fragaria x ananassa HOM05D005617 ORTHO05D006847 4.4e-49 199.1 101 98.0
FvH4_6g01860 Fragaria vesca HOM05D005617 ORTHO05D006847 5.8e-49 198.7 101 97.0
FAN14G3066 Fragaria x ananassa HOM05D005617 ORTHO05D006847 2.2e-48 196.8 101 97.0
FAN09G3889 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.1e-47 194.5 101 96.0
TAR365G0454 Trochodendron aralioides HOM05D005617 ORTHO05D006847 1.0e-45 188.0 229 47.6
CDE04G2248 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 1.2e-41 174.5 112 75.0
CBR_g63068 Chara braunii HOM05D005617 ORTHO05D006847 2.8e-35 153.3 224 39.7
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 3.4e-33 146.4 130 60.0
SHI23140 Sapria himalayana HOM05D005617 ORTHO05D001257 3.2e-31 139.8 188 42.6
BcaC07g38407 Brassica carinata HOM05D005617 ORTHO05D006847 9.3e-31 138.3 132 56.1
TPR.G11236 Trifolium pratense HOM05D005617 ORTHO05D006847 3.5e-30 136.3 109 61.5
C08p11620 Brassica napus HOM05D005617 ORTHO05D006847 1.2e-25 121.3 81 69.1
C08p11690 Brassica napus HOM05D005617 ORTHO05D006847 1.2e-25 121.3 81 67.9
Cpa.g.c45301 Carica papaya HOM05D005617 ORTHO05D006847 2.0e-25 120.6 73 75.3
C08p11650 Brassica napus HOM05D005617 ORTHO05D006847 1.0e-24 118.2 81 67.9
BolC8t48841H Brassica oleracea HOM05D005617 ORTHO05D006847 9.3e-23 111.7 82 67.1
BcaC07g38438 Brassica carinata HOM05D005617 ORTHO05D006847 6.9e-18 95.5 80 63.8
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 1.2e-14 84.7 136 32.4
PRCOL_00005829 Prasinoderma coloniale HOM05D005617 ORTHO05D006847 3.3e-12 76.6 196 28.1
BcaB01g02218 Brassica carinata HOM05D005617 ORTHO05D006847 5.7e-12 75.9 52 71.2
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 6.3e-11 72.4 66 57.6
Phvul.005G084700 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 1.4e-10 71.2 127 38.6
TPR.G6979 Trifolium pratense HOM05D005617 ORTHO05D006847 1.2e-09 68.2 101 46.5
FAN14G1862 Fragaria x ananassa HOM05D058902 ORTHO05D006847 5.9e-09 65.9 100 48.0
Atru.chr2.966 Acer truncatum HOM05D005617 ORTHO05D006847 1.7e-08 64.3 54 61.1
TPR.G21937 Trifolium pratense HOM05D005617 ORTHO05D006847 2.2e-08 63.9 60 55.0
Gohir.A12G036500 Gossypium hirsutum HOM05D004634 ORTHO05D005502 6.1e-06 55.8 280 23.6
Gohir.D12G036100 Gossypium hirsutum HOM05D004634 ORTHO05D005502 6.1e-06 55.8 280 23.6


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