Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G0435 Fragaria x ananassa HOM05D004903 ORTHO05D005849 4.1e-153 544.7 272 100.0
FAN02G0327 Fragaria x ananassa HOM05D004903 ORTHO05D005849 1.8e-148 529.3 272 97.4
FvH4_6g36070 Fragaria vesca HOM05D004903 ORTHO05D005849 7.6e-147 523.9 274 96.4
FAN09G2808 Fragaria x ananassa HOM05D004903 ORTHO05D005849 1.2e-144 516.5 276 94.6
FAN14G1686 Fragaria x ananassa HOM05D004903 ORTHO05D005849 1.2e-144 516.5 276 94.9
RcHm_v2.0_Chr2g0148141 Rosa chinensis HOM05D004903 ORTHO05D005849 3.2e-137 491.9 278 89.9
Prupe.3G030200 Prunus persica HOM05D004903 ORTHO05D005849 1.7e-114 416.4 282 77.0
MD09G1171800 Malus domestica HOM05D004903 ORTHO05D005849 4.2e-105 385.2 282 72.3
MD17G1155200 Malus domestica HOM05D004903 ORTHO05D005849 2.5e-102 375.9 286 69.9
QL05p000751 Quercus lobata HOM05D004903 ORTHO05D005849 1.7e-98 363.2 282 68.1
Manes.11G011500 Manihot esculenta HOM05D004903 ORTHO05D005849 1.4e-97 360.1 287 66.2
QL05p000658 Quercus lobata HOM05D004903 ORTHO05D005849 5.5e-97 358.2 287 66.2
CiPaw.01G210600 Carya illinoinensis HOM05D004903 ORTHO05D005849 2.1e-96 356.3 289 68.2
Atru.chr1.4170 Acer truncatum HOM05D004903 ORTHO05D005849 1.4e-95 353.6 282 64.5
Dinv20374 Davidia involucrata HOM05D004903 ORTHO05D005849 1.8e-95 353.2 286 64.3
TAR624G0709 Trochodendron aralioides HOM05D004903 ORTHO05D005849 1.1e-94 350.5 286 64.0
Potri.001G161800 Populus trichocarpa HOM05D004903 ORTHO05D005849 1.3e-93 347.1 286 63.6
Duzib160G0805 Durio zibethinus HOM05D004903 ORTHO05D005849 2.8e-93 345.9 282 62.4
ClCG09G001430 Citrullus lanatus HOM05D004903 ORTHO05D005849 6.3e-93 344.7 276 63.4
CSS0022789 Camellia sinensis var. sinensis HOM05D004903 ORTHO05D005849 1.4e-92 343.6 286 62.2
Ciclev10026250m.g Citrus clementina HOM05D004903 ORTHO05D005849 1.4e-92 343.6 288 63.9
Gorai.010G172600 Gossypium raimondii HOM05D004903 ORTHO05D005849 1.4e-92 343.6 282 62.8
GSVIVG01016657001 Vitis vinifera HOM05D004903 ORTHO05D005849 1.4e-92 343.6 277 63.9
Gohir.A06G142500 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.8e-92 343.2 282 62.8
CANSAT56G0172 Cannabis sativa HOM05D004903 ORTHO05D005849 4.1e-92 342.0 283 64.7
Hund18627 Selenicereus undatus HOM05D004903 ORTHO05D005849 2.0e-91 339.7 280 63.9
TWI59G0350 Tripterygium wilfordii HOM05D004903 ORTHO05D005849 2.6e-91 339.3 282 60.6
CAN.G1633.2 Capsicum annuum HOM05D004903 ORTHO05D005849 4.5e-91 338.6 284 61.3
Thecc.06G131400 Theobroma cacao HOM05D004903 ORTHO05D005849 4.5e-91 338.6 282 60.6
CsaV3_7G033900 Cucumis sativus L. HOM05D004903 ORTHO05D005849 2.2e-90 336.3 272 62.9
Actinidia25997 Actinidia chinensis HOM05D004903 ORTHO05D005849 5.0e-90 335.1 280 61.4
EL10Ac7g18248 Beta vulgaris HOM05D004903 ORTHO05D005849 1.1e-89 334.0 277 63.9
AUR62001391 Chenopodium quinoa HOM05D004903 ORTHO05D005849 9.4e-89 330.9 277 62.8
Nitab4.5_0006190g0020 Nicotiana tabacum HOM05D004903 ORTHO05D005849 1.2e-88 330.5 284 60.2
PGSC0003DMG400004869 Solanum tuberosum HOM05D004903 ORTHO05D005849 2.1e-88 329.7 285 59.6
Migut.I01143 Erythranthe guttata HOM05D004903 ORTHO05D005849 6.1e-88 328.2 280 60.7
Solyc06g063130.3 Solanum lycopersicum HOM05D004903 ORTHO05D005849 1.4e-87 327.0 285 59.3
AT1G53760 Arabidopsis thaliana HOM05D004903 ORTHO05D005849 1.8e-87 326.6 279 60.6
CARHR044070 Cardamine hirsuta HOM05D004903 ORTHO05D005849 1.8e-87 326.6 285 60.7
Lj3g0025901 Lotus japonicus HOM05D004903 ORTHO05D005849 1.8e-87 326.6 281 61.9
Glyma.07G046600 Glycine max HOM05D004903 ORTHO05D005849 2.3e-87 326.2 279 60.2
Peaxi162Scf00207g01534 Petunia axillaris HOM05D004903 ORTHO05D005849 2.3e-87 326.2 285 59.3
Sopen06g022580 Solanum pennellii HOM05D004903 ORTHO05D005849 2.3e-87 326.2 285 59.3
THA.LOC104810400 Tarenaya hassleriana HOM05D004903 ORTHO05D005849 2.3e-87 326.2 269 62.8
Lsat_1_v5_gn_5_137641 Lactuca sativa HOM05D004903 ORTHO05D005849 6.7e-87 324.7 263 63.5
BcaB02g10893 Brassica carinata HOM05D004903 ORTHO05D005849 8.8e-87 324.3 269 62.1
Thhalv10011709m.g Eutrema salsugineum HOM05D004903 ORTHO05D005849 8.8e-87 324.3 281 60.5
Actinidia24416 Actinidia chinensis HOM05D004903 ORTHO05D005849 1.5e-86 323.6 293 58.0
AL1G62450 Arabidopsis lyrata HOM05D004903 ORTHO05D005849 1.5e-86 323.6 278 60.1
Sed0027894 Sechium edule HOM05D004903 ORTHO05D005849 2.6e-86 322.8 274 61.7
Gohir.D06G202400 Gossypium hirsutum HOM05D004903 ORTHO05D005849 4.4e-86 322.0 270 61.9
Lj5A28T47 Lonicera japonica HOM05D004903 ORTHO05D005849 4.4e-86 322.0 341 52.8
A05p17920 Brassica napus HOM05D004903 ORTHO05D005849 5.7e-86 321.6 269 61.7
Gorai.010G236300 Gossypium raimondii HOM05D004903 ORTHO05D005849 5.7e-86 321.6 270 61.9
BraA05t20686Z Brassica rapa HOM05D004903 ORTHO05D005849 1.7e-85 320.1 269 61.3
C06p09540 Brassica napus HOM05D004903 ORTHO05D005849 2.2e-85 319.7 273 61.5
BolC6t36028H Brassica oleracea HOM05D004903 ORTHO05D005849 2.2e-85 319.7 273 61.5
BcaC08g44129 Brassica carinata HOM05D004903 ORTHO05D005849 2.8e-85 319.3 270 61.1
BolC6t36703H Brassica oleracea HOM05D004903 ORTHO05D005849 2.8e-85 319.3 270 61.1
Lalb_Chr17g0343171 Lupinus albus HOM05D004903 ORTHO05D005849 4.8e-85 318.5 278 57.9
C06p15280 Brassica napus HOM05D004903 ORTHO05D005849 6.3e-85 318.2 270 60.7
BraA06t23313Z Brassica rapa HOM05D004903 ORTHO05D005849 1.4e-84 317.0 274 61.3
Glyma.16G015600 Glycine max HOM05D004903 ORTHO05D005849 1.8e-84 316.6 277 59.6
Carub.0001s4303 Capsella rubella HOM05D004903 ORTHO05D005849 2.4e-84 316.2 279 58.8
COL.COLO4_30880 Corchorus olitorius HOM05D004903 ORTHO05D005849 2.4e-84 316.2 235 66.8
BcaC08g43554 Brassica carinata HOM05D004903 ORTHO05D005849 5.3e-84 315.1 273 60.4
A06p00790 Brassica napus HOM05D004903 ORTHO05D005849 7.0e-84 314.7 274 60.9
HanXRQChr12g0360041 Helianthus annuus HOM05D004903 ORTHO05D005849 7.0e-84 314.7 274 58.0
BcaB07g33303 Brassica carinata HOM05D004903 ORTHO05D005849 9.1e-84 314.3 275 60.4
MSTRG.10905 Avicennia marina HOM05D004903 ORTHO05D005849 1.3e-82 310.5 282 58.5
Medtr8g023500 Medicago truncatula HOM05D004903 ORTHO05D005849 1.3e-82 310.5 289 56.7
Sp1g40280 Schrenkiella parvula HOM05D004903 ORTHO05D005849 1.3e-82 310.5 279 58.4
arahy.Tifrunner.gnm1.ann1.97GHXX Arachis hypogaea HOM05D004903 ORTHO05D005849 2.2e-82 309.7 282 58.2
Eucgr.J02586 Eucalyptus grandis HOM05D004903 ORTHO05D005849 2.2e-82 309.7 287 58.5
Gohir.A06G194700 Gossypium hirsutum HOM05D004903 ORTHO05D005849 2.9e-82 309.3 270 60.7
DCAR_022636 Daucus carota HOM05D004903 ORTHO05D005849 3.8e-82 308.9 291 57.4
Nn8g38503 Nelumbo nucifera HOM05D004903 ORTHO05D005849 3.8e-82 308.9 283 59.4
vmacro18714 Vaccinium macrocarpon HOM05D004903 ORTHO05D005849 3.8e-82 308.9 285 58.6
Sc12g0011010 Simmondsia chinensis HOM05D004903 ORTHO05D005849 5.5e-81 305.1 260 60.4
arahy.Tifrunner.gnm1.ann1.AA2XIP Arachis hypogaea HOM05D004903 ORTHO05D005849 7.2e-81 304.7 285 56.5
SalBow6G3230 Salvia bowleyana HOM05D004903 ORTHO05D005849 9.4e-81 304.3 280 56.1
arahy.Tifrunner.gnm1.ann1.3XU7EE Arachis hypogaea HOM05D004903 ORTHO05D005849 2.1e-80 303.1 281 58.0
Sabra03G0044200 Salix brachista HOM05D004903 ORTHO05D005849 8.0e-80 301.2 313 54.0
arahy.Tifrunner.gnm1.ann1.M9BVNS Arachis hypogaea HOM05D004903 ORTHO05D005849 1.4e-79 300.4 282 56.7
PSO135G0609 Papaver somniferum HOM05D004903 ORTHO05D005849 1.8e-79 300.1 280 56.1
Aa31LG10G1530 Aethionema arabicum HOM05D000070 ORTHO05D003301 2.3e-79 299.7 250 60.8
Cc04_g00600 Coffea canephora HOM05D004903 ORTHO05D005849 5.2e-79 298.5 290 55.5
Phvul.010G122300 Phaseolus vulgaris HOM05D004903 ORTHO05D005849 8.8e-79 297.7 282 55.0
PSO724G0850 Papaver somniferum HOM05D004903 ORTHO05D005849 2.0e-78 296.6 280 55.4
Psat4g164720 Pisum sativum HOM05D004903 ORTHO05D005849 3.4e-78 295.8 278 55.4
Aqoxy7G00919 Aquilegia oxysepala HOM05D004903 ORTHO05D005849 4.4e-78 295.4 295 53.9
Nitab4.5_0010570g0050 Nicotiana tabacum HOM05D004903 ORTHO05D005849 7.5e-78 294.7 274 56.2
arahy.Tifrunner.gnm1.ann1.HDKQ14 Arachis hypogaea HOM05D004903 ORTHO05D005849 1.3e-77 293.9 302 54.0
Rhsim08G0245600 Rhododendron simsii HOM05D004903 ORTHO05D005849 4.8e-77 292.0 208 69.7
arahy.Tifrunner.gnm1.ann1.ZQ2A8X Arachis hypogaea HOM05D004903 ORTHO05D005849 3.5e-75 285.8 302 53.3
Sabra01G0130700 Salix brachista HOM05D004903 ORTHO05D005849 4.5e-75 285.4 307 54.4
arahy.Tifrunner.gnm1.ann1.5Z4EMJ Arachis hypogaea HOM05D004903 ORTHO05D005849 7.7e-75 284.6 272 56.2
Cpa.g.sc25.203 Carica papaya HOM05D004903 ORTHO05D005849 1.3e-74 283.9 195 71.8
Gorai.011G054300 Gossypium raimondii HOM05D004903 ORTHO05D005849 3.8e-74 282.3 221 64.3
MELO3C024303.2 Cucumis melo HOM05D004903 ORTHO05D005849 6.5e-74 281.6 193 69.9
SGA_v2.0_scaffold71G23946 Striga asiatica HOM05D004903 ORTHO05D005849 1.1e-73 280.8 279 55.6
ATR0006G080 Amborella trichopoda HOM05D004903 ORTHO05D005849 1.5e-73 280.4 272 50.7
unitig_32.g11002 Utricularia gibba HOM05D004903 ORTHO05D005849 1.9e-73 280.0 281 51.6
TPR.G15248 Trifolium pratense HOM05D004903 ORTHO05D005849 5.5e-73 278.5 228 62.3
Dinv37814 Davidia involucrata HOM05D004903 ORTHO05D005849 1.6e-72 276.9 211 67.8
Oeu053414.1 Olea europaea HOM05D004903 ORTHO05D005849 1.6e-72 276.9 238 59.7
HPP92_000828 Vanilla planifolia HOM05D004903 ORTHO05D005849 4.7e-72 275.4 273 52.7
AUR62025608 Chenopodium quinoa HOM05D004903 ORTHO05D005849 6.1e-72 275.0 276 56.2
Cfa003452 Carpinus fangiana HOM05D004903 ORTHO05D005849 3.0e-71 272.7 209 69.4
Ca_23466_v3 Cicer arietinum L. HOM05D004903 ORTHO05D005849 1.5e-70 270.4 226 61.1
Zm00001eb207930 Zea mays HOM05D004903 ORTHO05D005849 3.4e-70 269.2 278 51.1
VMungo0331G0875 Vigna mungo HOM05D004903 ORTHO05D005849 2.8e-69 266.2 209 64.1
Oeu019513.1 Olea europaea HOM05D004903 ORTHO05D005849 1.8e-68 263.5 195 68.7
Os02g0152600 Oryza sativa ssp. japonica HOM05D004903 ORTHO05D005849 1.2e-67 260.8 292 49.3
ECA234G0009 Erigeron canadensis HOM05D004903 ORTHO05D005849 4.5e-67 258.8 215 61.9
Gohir.A10G050050 Gossypium hirsutum HOM05D004903 ORTHO05D005849 4.5e-67 258.8 280 52.1
MBI17_g12875_MAGBIO Magnolia biondii HOM05D004903 ORTHO05D005849 5.9e-67 258.5 270 50.4
Hma1.2p1_1999F.1_g310500 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 2.1e-64 250.0 194 64.9
Sed0021101 Sechium edule HOM05D004903 ORTHO05D005849 7.5e-62 241.5 224 56.7
Hma1.2p1_0090F.1_g045680 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 8.3e-61 238.0 211 57.8
CDE06G0378 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 2.7e-59 233.0 236 50.4
Actinidia31143 Actinidia chinensis HOM05D004903 ORTHO05D005849 5.6e-57 225.3 209 57.9
CDE04G1042 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 2.8e-56 223.0 237 50.6
Gohir.D10G050650 Gossypium hirsutum HOM05D004903 ORTHO05D005849 3.7e-53 212.6 170 62.4
Mapoly0021s0048 Marchantia polymorpha HOM05D004903 ORTHO05D005849 3.2e-44 183.0 288 36.1
AagrBONN_evm.TU.Sc2ySwM_228.2429 Anthoceros agrestis HOM05D004903 ORTHO05D005849 7.8e-43 178.3 214 40.7
Haze_16148 Corylus avellana HOM05D003205 ORTHO05D003746 1.3e-42 177.6 194 55.7
Haze_16144 Corylus avellana HOM05D003205 ORTHO05D003746 1.2e-40 171.0 194 54.6
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 8.1e-40 168.3 219 45.2
Gohir.D06G148232 Gossypium hirsutum HOM05D004903 ORTHO05D005849 1.4e-36 157.5 126 61.1
arahy.Tifrunner.gnm1.ann1.RS9BE1 Arachis hypogaea HOM05D004903 ORTHO05D005849 2.3e-34 150.2 174 50.0
BcaB02g07096 Brassica carinata HOM05D000219 ORTHO05D000226 3.9e-34 149.4 126 61.9
arahy.Tifrunner.gnm1.ann1.AT31DH Arachis hypogaea HOM05D004903 ORTHO05D005849 2.5e-33 146.7 96 74.0
BcaB07g32153 Brassica carinata HOM05D004903 ORTHO05D005849 4.3e-33 146.0 126 57.9
CBR_g34164 Chara braunii HOM05D004903 ORTHO05D005849 2.8e-32 143.3 208 36.5
Pp3c13_9790 Physcomitrium patens HOM05D004903 ORTHO05D005849 3.1e-31 139.8 276 32.2
Gohir.D02G109866 Gossypium hirsutum HOM05D004903 ORTHO05D005849 7.6e-22 108.6 93 57.0
CDE06G0441 Ceratophyllum demersum HOM05D004903 ORTHO05D005849 7.9e-19 98.6 88 54.5
SEGI_28585 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 1.1e-17 94.7 130 41.5
SEGI_38260 Sequoiadendron giganteum HOM05D004903 ORTHO05D005849 1.1e-17 94.7 139 40.3
Glyma.16G014900 Glycine max HOM05D004903 ORTHO05D005849 1.1e-15 88.2 87 52.9
Hma1.2p1_0090F.1_g045690 Hydrangea macrophylla HOM05D004903 ORTHO05D005849 3.1e-15 86.7 77 58.4
Duzib192G1079 Durio zibethinus HOM05D004903 ORTHO05D005849 6.9e-15 85.5 205 31.7
PRCOL_00005128 Prasinoderma coloniale HOM05D004903 ORTHO05D005849 2.9e-13 80.1 135 40.7
Cre08.g358557 Chlamydomonas reinhardtii HOM05D004903 ORTHO05D005849 1.1e-12 78.2 139 32.4
TPR.G26438 Trifolium pratense HOM05D004903 ORTHO05D005849 4.6e-11 72.8 81 48.1
arahy.Tifrunner.gnm1.ann1.1E2DFU Arachis hypogaea HOM05D001485 ORTHO05D005849 1.8e-10 70.9 47 78.7
Cpa.g.sc25.204 Carica papaya HOM05D004903 ORTHO05D005849 4.3e-09 66.2 109 41.3
MCO07G235 Micromonas commoda HOM05D004903 ORTHO05D005849 1.3e-08 64.7 144 27.1
MBI17_g12881_MAGBIO Magnolia biondii HOM05D007686 ORTHO05D009709 1.1e-07 61.6 56 53.6
Actinidia21845 Actinidia chinensis HOM05D004903 ORTHO05D005849 2.0e-06 57.4 44 56.8
arahy.Tifrunner.gnm1.ann1.ZRCJ38 Arachis hypogaea HOM05D004903 ORTHO05D005849 1.0e-05 55.1 65 52.3


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