Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G0420 Fragaria x ananassa HOM05D005012 ORTHO05D005886 5.3e-53 210.7 102 100.0
FvH4_6g38710 Fragaria vesca HOM05D008209 ORTHO05D010322 7.7e-44 180.3 87 98.9
FAN11G2763 Fragaria x ananassa HOM05D005012 ORTHO05D008319 3.8e-27 124.8 97 69.1
FvH4_6g37930 Fragaria vesca HOM05D005012 ORTHO05D005886 5.0e-27 124.4 64 93.8
FvH4_3g22860 Fragaria vesca HOM05D005012 ORTHO05D005886 8.6e-27 123.6 97 68.0
FAN08G1587 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.5e-26 122.9 64 92.2
FAN17G1574 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.5e-26 122.9 102 65.7
FAN05G1721 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.7e-22 109.4 98 65.3
RcHm_v2.0_Chr3g0475981 Rosa chinensis HOM05D005012 ORTHO05D005886 6.6e-11 70.9 60 50.0
RcHm_v2.0_Chr6g0273901 Rosa chinensis HOM05D005012 ORTHO05D005886 4.7e-09 64.7 59 45.8
RcHm_v2.0_Chr7g0222641 Rosa chinensis HOM05D005012 ORTHO05D005886 8.0e-09 63.9 59 45.8
RcHm_v2.0_Chr1g0346721 Rosa chinensis HOM05D005012 ORTHO05D005886 1.8e-08 62.8 59 44.1
RcHm_v2.0_Chr7g0220741 Rosa chinensis HOM05D005012 ORTHO05D005886 4.0e-08 61.6 59 44.1
FvH4_6g21851 Fragaria vesca HOM05D005012 ORTHO05D005886 5.2e-08 61.2 99 36.4
FAN26G1690 Fragaria x ananassa HOM05D005012 ORTHO05D005886 6.8e-08 60.8 86 46.5
RcHm_v2.0_Chr2g0138651 Rosa chinensis HOM05D005012 ORTHO05D005886 8.9e-08 60.5 59 44.1
FAN10G0147 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.5e-07 59.7 63 46.0
RcHm_v2.0_Chr4g0416921 Rosa chinensis HOM05D005012 ORTHO05D005886 1.5e-07 59.7 48 52.1
FAN15G1928 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.6e-07 58.9 76 40.8
FvH4_1g29802 Fragaria vesca HOM05D005012 ORTHO05D005886 3.4e-07 58.5 47 53.2
FAN26G2139 Fragaria x ananassa HOM05D005012 ORTHO05D005886 3.4e-07 58.5 63 44.4
FAN19G1173 Fragaria x ananassa HOM05D005012 ORTHO05D005886 4.4e-07 58.2 63 46.0
FAN16G2537 Fragaria x ananassa HOM05D005012 ORTHO05D005886 5.8e-07 57.8 63 46.0
FAN13G1160 Fragaria x ananassa HOM05D005012 ORTHO05D005886 7.5e-07 57.4 63 44.4
FAN16G2301 Fragaria x ananassa HOM05D005012 ORTHO05D005886 7.5e-07 57.4 63 44.4
FAN20G1519 Fragaria x ananassa HOM05D005012 ORTHO05D005886 7.5e-07 57.4 63 44.4
FvH4_1g28181 Fragaria vesca HOM05D005012 ORTHO05D005886 1.3e-06 56.6 97 34.0
FAN04G2305 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.3e-06 56.6 63 46.0
FAN19G1169 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.3e-06 56.6 97 34.0
FAN22G1849 Fragaria x ananassa HOM05D005012 ORTHO05D005886 1.7e-06 56.2 61 41.0
FAN04G0818 Fragaria x ananassa HOM05D005012 ORTHO05D005886 2.9e-06 55.5 84 36.9
FvH4_5g37421 Fragaria vesca HOM05D005012 ORTHO05D005886 6.4e-06 54.3 67 43.3


User provided reference genes

Program Settings