Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G0405 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.2e-82 308.9 154 100.0
FAN09G0780 Fragaria x ananassa HOM05D000034 ORTHO05D000277 9.8e-59 230.3 123 94.3
FAN24G2067 Fragaria x ananassa HOM05D000034 ORTHO05D000277 3.6e-45 185.3 194 57.7
FvH4_7g00320 Fragaria vesca HOM05D000034 ORTHO05D000277 4.0e-44 181.8 130 76.9
FAN22G1985 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.1e-41 173.7 194 55.7
FvH4_1g22560 Fragaria vesca HOM05D000034 ORTHO05D000037 1.0e-39 167.2 185 55.1
FvH4_7g11552 Fragaria vesca HOM05D000034 ORTHO05D000277 6.6e-39 164.5 182 56.6
FAN03G2645 Fragaria x ananassa HOM05D000034 ORTHO05D000277 6.6e-39 164.5 118 78.8
FAN11G0226 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.4e-36 156.8 118 74.6
FAN25G0666 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.5e-35 153.3 132 63.6
FAN25G0710 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.5e-35 153.3 132 63.6
FAN12G3067 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.9e-33 146.4 130 67.7
FAN28G1917 Fragaria x ananassa HOM05D000034 ORTHO05D000277 3.2e-33 145.6 132 61.4
FvH4_6g09145 Fragaria vesca HOM05D000034 ORTHO05D000277 5.4e-33 144.8 78 97.4
FAN05G0075 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.2e-32 143.7 118 67.8
FAN20G0414 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.3e-31 139.4 180 52.8
FAN21G1005 Fragaria x ananassa HOM05D000034 ORTHO05D000277 3.3e-30 135.6 137 61.3
FAN09G3387 Fragaria x ananassa HOM05D000034 ORTHO05D000277 8.1e-29 131.0 121 61.2
FAN12G0701 Fragaria x ananassa HOM05D000034 ORTHO05D000277 8.1e-29 131.0 118 65.3
FAN28G1335 Fragaria x ananassa HOM05D000034 ORTHO05D000277 6.8e-28 127.9 118 68.6
FAN02G4058 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.2e-27 127.1 119 65.5
FAN24G1441 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.5e-27 126.7 105 71.4
FAN21G2311 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.9e-26 122.5 92 69.6
RcHm_v2.0_Chr1g0373591 Rosa chinensis HOM05D000034 ORTHO05D000277 2.4e-25 119.4 190 40.0
FvH4_2g04031 Fragaria vesca HOM05D000034 ORTHO05D000277 1.2e-24 117.1 136 47.1
FvH4_1g18411 Fragaria vesca HOM05D000034 ORTHO05D000277 1.6e-24 116.7 136 47.1
FvH4_4g09541 Fragaria vesca HOM05D000034 ORTHO05D000277 3.9e-23 112.1 136 47.1
FAN05G4941 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.1e-22 110.5 61 96.7
FvH4_4g15171 Fragaria vesca HOM05D000034 ORTHO05D000277 7.3e-22 107.8 146 48.6
FAN09G0335 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.3e-21 107.1 137 45.3
FAN25G0466 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.3e-21 107.1 134 45.5
FvH4_2g09412 Fragaria vesca HOM05D000034 ORTHO05D000277 1.4e-20 103.6 149 47.7
FvH4_1g24290 Fragaria vesca HOM05D000034 ORTHO05D000277 1.8e-20 103.2 75 80.0
FAN20G1514 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.4e-20 102.8 135 50.4
FvH4_3g15552 Fragaria vesca HOM05D000034 ORTHO05D000277 5.3e-20 101.7 84 69.0
FAN04G3245 Fragaria x ananassa HOM05D000034 ORTHO05D000277 5.8e-19 98.2 197 36.5
FAN02G0050 Fragaria x ananassa HOM05D000034 ORTHO05D000277 9.9e-19 97.4 103 59.2
FAN22G0450 Fragaria x ananassa HOM05D000034 ORTHO05D000277 9.9e-19 97.4 103 59.2
FAN08G2368 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.9e-18 95.9 103 58.3
FAN17G0070 Fragaria x ananassa HOM05D000034 ORTHO05D000277 6.4e-18 94.7 203 34.5
FvH4_2g07610 Fragaria vesca HOM05D000034 ORTHO05D000277 1.4e-17 93.6 144 43.8
FAN26G0732 Fragaria x ananassa HOM05D000034 ORTHO05D000277 5.4e-17 91.7 191 37.2
FAN08G3130 Fragaria x ananassa HOM05D000034 ORTHO05D000277 9.3e-17 90.9 61 82.0
FAN13G2412 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.1e-16 89.7 191 36.1
FvH4_2g04811 Fragaria vesca HOM05D000034 ORTHO05D000277 4.6e-16 88.6 138 43.5
FAN20G2099 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.3e-15 86.3 156 46.2
FAN17G1994 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.1e-14 84.0 147 42.2
CANSAT11G0741 Cannabis sativa HOM05D000034 ORTHO05D000277 2.5e-14 82.8 131 41.2
CANSAT25G0805 Cannabis sativa HOM05D000034 ORTHO05D000277 7.3e-14 81.3 131 39.7
FAN15G3165 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.3e-13 80.5 191 34.6
FAN08G3309 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.6e-13 80.1 132 41.7
FvH4_3g30720 Fragaria vesca HOM05D000034 ORTHO05D000277 3.6e-13 79.0 139 41.7
CANSAT21G0305 Cannabis sativa HOM05D000034 ORTHO05D000277 4.8e-13 78.6 131 39.7
FAN21G0385 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.4e-12 77.0 123 41.5
FAN06G3685 Fragaria x ananassa HOM05D000034 ORTHO05D000277 4.0e-12 75.5 63 69.8
FAN08G2786 Fragaria x ananassa HOM05D000034 ORTHO05D000277 4.0e-12 75.5 68 52.9
MD10G1011200 Malus domestica HOM05D000034 ORTHO05D000277 9.0e-12 74.3 146 38.4
CANSAT64G1464 Cannabis sativa HOM05D000034 ORTHO05D000277 3.4e-11 72.4 73 49.3
Atru.chr2.2599 Acer truncatum HOM05D000034 ORTHO05D000277 3.8e-10 68.9 118 40.7
FAN11G4007 Fragaria x ananassa HOM05D000034 ORTHO05D000277 3.8e-10 68.9 63 61.9
FAN02G4017 Fragaria x ananassa HOM05D000034 ORTHO05D000277 6.4e-10 68.2 100 43.0
FAN26G2222 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.4e-09 67.0 81 60.5
Atru.chr6.1585 Acer truncatum HOM05D000034 ORTHO05D000277 3.2e-09 65.9 162 30.2
FAN26G3355 Fragaria x ananassa HOM05D000034 ORTHO05D000277 7.1e-09 64.7 98 38.8
FAN20G1698 Fragaria x ananassa HOM05D000034 ORTHO05D000277 9.3e-09 64.3 95 43.2
RcHm_v2.0_Chr2g0106711 Rosa chinensis HOM05D000034 ORTHO05D025609 3.5e-08 62.4 142 27.5
FAN08G2078 Fragaria x ananassa HOM05D011794 ORTHO05D000277 6.0e-08 61.6 125 39.2
FAN16G1617 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.3e-07 60.5 143 30.8
FAN19G1412 Fragaria x ananassa HOM05D002788 ORTHO05D025609 3.9e-07 58.9 164 29.3
FAN20G2803 Fragaria x ananassa HOM05D000034 ORTHO05D000277 3.9e-07 58.9 108 40.7
FAN09G4862 Fragaria x ananassa HOM05D000034 ORTHO05D000277 5.1e-07 58.5 46 69.6
FAN13G2115 Fragaria x ananassa HOM05D000034 ORTHO05D000277 5.1e-07 58.5 59 49.2
FAN28G0140 Fragaria x ananassa HOM05D002788 ORTHO05D025609 6.7e-07 58.2 118 33.1
FAN28G0483 Fragaria x ananassa HOM05D002788 ORTHO05D025609 8.7e-07 57.8 118 33.1
MD15G1289200 Malus domestica HOM05D000034 ORTHO05D000277 8.7e-07 57.8 176 25.6
FAN03G2701 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.5e-06 56.2 86 39.5
FAN27G0647 Fragaria x ananassa HOM05D000034 ORTHO05D000277 3.3e-06 55.8 92 41.3
FAN16G3514 Fragaria x ananassa HOM05D000034 ORTHO05D000277 4.3e-06 55.5 40 52.5
Hma1.2p1_0423F.1_g150230 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.4e-06 54.7 147 28.6
Hma1.2p1_0489F.1_g164000 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.4e-06 54.7 119 28.6
RcHm_v2.0_Chr7g0219611 Rosa chinensis HOM05D000034 ORTHO05D000277 7.4e-06 54.7 123 38.2
Hma1.2p1_0664F.1_g199003 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.6e-06 54.3 119 28.6


User provided reference genes

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