Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.6e-61 239.2 120 100.0
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 3.0e-47 191.8 98 95.9
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 7.4e-46 187.2 98 90.8
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.7e-45 186.0 98 89.8
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 5.9e-43 177.6 98 86.7
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 7.7e-43 177.2 94 91.5
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 1.5e-38 162.9 93 83.9
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 8.2e-37 157.1 93 81.7
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 6.5e-34 147.5 92 76.1
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 1.9e-33 146.0 96 75.0
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 4.2e-33 144.8 95 75.8
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 6.1e-32 141.0 89 79.8
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 8.0e-32 140.6 98 68.4
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 1.4e-31 139.8 95 71.6
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 1.4e-31 139.8 127 62.2
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 3.0e-31 138.7 95 72.6
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 8.8e-31 137.1 98 71.4
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 8.8e-31 137.1 97 71.1
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 2.0e-30 136.0 97 70.1
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 2.6e-30 135.6 98 70.4
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 7.4e-30 134.0 96 68.8
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 9.7e-30 133.7 91 69.2
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 1.3e-29 133.3 81 75.3
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 1.3e-29 133.3 96 70.8
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 1.3e-29 133.3 93 72.0
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 1.7e-29 132.9 84 73.8
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 4.8e-29 131.3 93 69.9
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 4.8e-29 131.3 102 66.7
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 4.8e-29 131.3 91 72.5
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 4.1e-28 128.3 87 74.7
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 5.3e-28 127.9 119 55.5
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 7.0e-28 127.5 115 59.1
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 9.1e-28 127.1 81 76.5
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 1.2e-27 126.7 92 70.7
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 1.6e-27 126.3 84 72.6
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.0e-27 125.9 85 69.4
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.0e-27 125.9 85 69.4
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.0e-27 125.9 85 69.4
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 3.5e-27 125.2 86 67.4
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 3.5e-27 125.2 82 75.6
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 3.5e-27 125.2 77 79.2
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 4.5e-27 124.8 77 79.2
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 4.5e-27 124.8 93 67.7
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 5.9e-27 124.4 82 70.7
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 7.7e-27 124.0 87 70.1
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.0e-26 123.6 85 69.4
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 1.3e-26 123.2 92 66.3
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 2.9e-26 122.1 87 69.0
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 2.9e-26 122.1 92 65.2
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 3.8e-26 121.7 93 65.6
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 5.0e-26 121.3 108 60.2
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 6.5e-26 120.9 130 51.5
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 6.5e-26 120.9 92 66.3
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 1.5e-25 119.8 108 59.3
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 1.5e-25 119.8 96 65.6
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 2.5e-25 119.0 80 75.0
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 2.5e-25 119.0 96 65.6
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 3.2e-25 118.6 83 72.3
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 3.6e-24 115.2 84 70.2
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 6.1e-24 114.4 81 67.9
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 6.1e-24 114.4 93 64.5
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 1.4e-23 113.2 100 63.0
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 1.4e-23 113.2 81 70.4
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 2.3e-23 112.5 94 60.6
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 6.7e-23 110.9 91 61.5
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 1.5e-22 109.8 83 63.9
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 1.5e-22 109.8 99 56.6
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 2.0e-22 109.4 83 63.9
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 2.0e-22 109.4 94 61.7
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 3.3e-22 108.6 84 64.3
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 7.5e-22 107.5 83 62.7
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 7.5e-22 107.5 83 62.7
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 9.7e-22 107.1 99 55.6
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 9.7e-22 107.1 83 61.4
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 1.3e-21 106.7 83 62.7
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 1.3e-21 106.7 98 57.1
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 1.3e-21 106.7 77 66.2
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 3.7e-21 105.1 79 67.1
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 3.7e-21 105.1 85 57.6
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 6.3e-21 104.4 83 59.0
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 6.3e-21 104.4 83 59.0
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 6.3e-21 104.4 83 59.0
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 2.4e-20 102.4 99 57.6
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 2.4e-20 102.4 77 64.9
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 4.1e-20 101.7 82 59.8
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 4.1e-20 101.7 78 64.1
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 1.6e-19 99.8 89 56.2
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 2.0e-19 99.4 124 46.0
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.0e-19 99.4 66 71.2
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 3.2e-17 92.0 73 58.9
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 4.2e-17 91.7 82 58.5
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 4.7e-16 88.2 78 55.1
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 8.0e-16 87.4 72 61.1
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 8.0e-16 87.4 87 56.3
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 4.4e-14 81.6 44 86.4
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 2.2e-13 79.3 62 59.7
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.8e-13 79.0 85 50.6
MD17G1110300 Malus domestica HOM05D007186 ORTHO05D008970 5.9e-11 71.2 42 81.0
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 7.7e-11 70.9 60 61.7
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 1.2e-08 63.5 48 66.7
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 1.4e-07 60.1 87 36.8
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 4.0e-07 58.5 80 45.0


User provided reference genes

Program Settings