Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G0149 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.0e-105 383.6 179 100.0
FAN14G2642 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.0e-105 383.6 179 100.0
FAN02G3644 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.6e-63 244.2 117 96.6
FAN05G3234 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.1e-52 209.5 116 87.1
RcHm_v2.0_Chr3g0480281 Rosa chinensis HOM05D003981 ORTHO05D003666 9.7e-50 200.7 151 64.9
MD11G1005600 Malus domestica HOM05D003981 ORTHO05D003666 1.1e-26 124.0 126 48.4
MD11G1006300 Malus domestica HOM05D003981 ORTHO05D003666 7.0e-24 114.8 134 46.3
RcHm_v2.0_Chr6g0253541 Rosa chinensis HOM05D003981 ORTHO05D003666 5.9e-23 111.7 126 50.0
FvH4_2g04190 Fragaria vesca HOM05D003981 ORTHO05D003666 3.8e-22 109.0 163 39.9
MD04G1179800 Malus domestica HOM05D003981 ORTHO05D003666 6.5e-22 108.2 123 44.7
MD11G1006900 Malus domestica HOM05D003981 ORTHO05D003666 8.5e-22 107.8 133 45.1
RcHm_v2.0_Chr3g0460411 Rosa chinensis HOM05D003981 ORTHO05D003666 1.1e-21 107.5 117 49.6
FAN24G2659 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.9e-21 106.7 122 46.7
FAN15G2324 Fragaria x ananassa HOM05D002345 ORTHO05D002391 1.2e-20 104.0 122 45.9
FvH4_5g07510 Fragaria vesca HOM05D003981 ORTHO05D003666 2.7e-20 102.8 193 37.8
FAN07G1958 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.7e-20 102.8 135 44.4
FvH4_5g07350 Fragaria vesca HOM05D003981 ORTHO05D003666 4.7e-20 102.1 186 37.6
FvH4_6g09801 Fragaria vesca HOM05D003981 ORTHO05D003666 6.1e-20 101.7 140 43.6
FAN14G1975 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.1e-20 101.7 140 43.6
FvH4_5g07470 Fragaria vesca HOM05D003981 ORTHO05D003666 1.0e-19 100.9 193 37.8
MD12G1195600 Malus domestica HOM05D003981 ORTHO05D003666 1.8e-19 100.1 116 46.6
Prupe.2G096000 Prunus persica HOM05D003981 ORTHO05D003666 1.2e-18 97.4 111 41.4
FAN05G2982 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.5e-18 97.1 186 39.2
Prupe.2G209200 Prunus persica HOM05D003981 ORTHO05D003666 3.4e-18 95.9 121 40.5
FAN09G1004 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.7e-18 95.1 139 46.0
RcHm_v2.0_Chr3g0449831 Rosa chinensis HOM05D003981 ORTHO05D003666 7.5e-18 94.7 150 38.7
Prupe.2G095800 Prunus persica HOM05D003981 ORTHO05D003666 1.3e-17 94.0 115 45.2
FAN06G2056 Fragaria x ananassa HOM05D001225 ORTHO05D001252 1.7e-17 93.6 117 44.4
FAN14G5156 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.2e-17 93.2 125 44.8
RcHm_v2.0_Chr2g0164001 Rosa chinensis HOM05D003981 ORTHO05D003666 2.2e-17 93.2 120 44.2
FAN19G0280 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.7e-17 92.4 123 43.9
FAN10G2747 Fragaria x ananassa HOM05D001225 ORTHO05D001252 4.8e-17 92.0 117 42.7
FAN27G2648 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.8e-17 92.0 106 46.2
MD12G1195000 Malus domestica HOM05D003981 ORTHO05D003666 1.1e-16 90.9 135 38.5
FAN16G2079 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.4e-16 89.7 126 44.4
FAN17G1570 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.4e-16 89.7 156 39.7
FvH4_6g09911 Fragaria vesca HOM05D003981 ORTHO05D003666 3.1e-16 89.4 134 42.5
FAN01G2610 Fragaria x ananassa HOM05D001225 ORTHO05D001252 3.1e-16 89.4 117 41.9
Prupe.7G195100 Prunus persica HOM05D003981 ORTHO05D003666 3.1e-16 89.4 123 43.1
Prupe.7G195400 Prunus persica HOM05D003981 ORTHO05D003666 3.1e-16 89.4 123 43.1
FAN07G0986 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.4e-16 88.6 127 43.3
Prupe.2G095900 Prunus persica HOM05D003981 ORTHO05D003666 7.0e-16 88.2 113 38.1
FvH4_3g40671 Fragaria vesca HOM05D003981 ORTHO05D003666 9.1e-16 87.8 126 43.7
RcHm_v2.0_Chr4g0428611 Rosa chinensis HOM05D003981 ORTHO05D003666 1.6e-15 87.0 122 42.6
FAN11G1242 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.0e-15 86.7 110 46.4
RcHm_v2.0_Chr5g0016491 Rosa chinensis HOM05D003981 ORTHO05D003666 2.0e-15 86.7 127 37.0
FvH4_4g34580 Fragaria vesca HOM05D003981 ORTHO05D003666 2.7e-15 86.3 128 43.0
FAN12G2446 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.5e-15 85.5 128 43.0
FAN03G0829 Fragaria x ananassa HOM05D001225 ORTHO05D001252 1.0e-14 84.3 120 42.5
FvH4_4g22410 Fragaria vesca HOM05D003981 ORTHO05D003666 1.3e-14 84.0 119 41.2
FAN14G0912 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.3e-14 84.0 127 38.6
FvH4_4g34520 Fragaria vesca HOM05D003981 ORTHO05D003666 1.7e-14 83.6 128 41.4
MD12G1195500 Malus domestica HOM05D003981 ORTHO05D003666 1.7e-14 83.6 123 43.9
RcHm_v2.0_Chr2g0085201 Rosa chinensis HOM05D003981 ORTHO05D003666 1.7e-14 83.6 116 44.0
FvH4_6g03511 Fragaria vesca HOM05D003981 ORTHO05D003666 2.2e-14 83.2 127 38.6
FvH4_6g45801 Fragaria vesca HOM05D003981 ORTHO05D003666 3.8e-14 82.4 117 41.0
FAN09G0546 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.8e-14 82.4 117 41.0
Prupe.2G095600 Prunus persica HOM05D003981 ORTHO05D003666 3.8e-14 82.4 109 39.4
Prupe.7G182200 Prunus persica HOM05D003981 ORTHO05D003666 3.8e-14 82.4 148 35.8
FvH4_5g31171 Fragaria vesca HOM05D003981 ORTHO05D003666 5.0e-14 82.0 127 37.8
FAN12G3036 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.0e-14 82.0 128 41.4
FAN14G2468 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.0e-14 82.0 124 39.5
TWI59G0188 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 5.0e-14 82.0 121 39.7
FAN08G0706 Fragaria x ananassa HOM05D005518 ORTHO05D001269 1.1e-13 80.9 130 38.5
Prupe.8G061400 Prunus persica HOM05D003981 ORTHO05D003666 1.5e-13 80.5 119 43.7
FAN13G2076 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.5e-13 79.7 130 40.0
FAN25G1054 Fragaria x ananassa HOM05D005518 ORTHO05D001269 2.5e-13 79.7 130 40.0
FvH4_6g14781 Fragaria vesca HOM05D003981 ORTHO05D003666 3.2e-13 79.3 124 38.7
FAN19G2785 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.2e-13 79.3 183 31.7
FAN09G1373 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.5e-13 78.6 81 49.4
Atru.chr5.2441 Acer truncatum HOM05D003981 ORTHO05D003666 7.2e-13 78.2 160 35.0
FvH4_1g25190 Fragaria vesca HOM05D003981 ORTHO05D003666 7.2e-13 78.2 124 37.1
FAN18G3444 Fragaria x ananassa HOM05D003981 ORTHO05D003666 7.2e-13 78.2 109 42.2
FvH4_5g08848 Fragaria vesca HOM05D003981 ORTHO05D003666 9.4e-13 77.8 128 41.4
FAN14G1511 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.7e-12 76.3 148 36.5
FvH4_1g00691 Fragaria vesca HOM05D003981 ORTHO05D003666 3.6e-12 75.9 120 41.7
Prupe.3G238400 Prunus persica HOM05D003981 ORTHO05D003666 3.6e-12 75.9 120 40.0
Ciclev10030374m.g Citrus clementina HOM05D003981 ORTHO05D003666 8.0e-12 74.7 92 45.7
FvH4_6g47480 Fragaria vesca HOM05D003981 ORTHO05D003666 8.0e-12 74.7 116 42.2
FAN28G1753 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.0e-12 74.7 122 41.0
QL05p054335 Quercus lobata HOM05D000007 ORTHO05D003666 1.0e-11 74.3 119 42.9
QL08p033970 Quercus lobata HOM05D000007 ORTHO05D003666 1.0e-11 74.3 117 45.3
FAN08G0171 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.8e-11 73.6 155 35.5
Atru.chr5.2443 Acer truncatum HOM05D003981 ORTHO05D003666 3.0e-11 72.8 123 38.2
FAN04G2111 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.0e-11 72.8 155 35.5
FAN02G1117 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.8e-11 71.6 111 37.8
FAN04G1299 Fragaria x ananassa HOM05D003981 ORTHO05D003666 6.8e-11 71.6 96 42.7
Prupe.2G095700 Prunus persica HOM05D003981 ORTHO05D003666 1.2e-10 70.9 76 43.4
FAN13G0559 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.5e-10 70.5 173 35.8
FAN08G1984 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.4e-10 68.9 173 35.8
FAN26G3326 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.7e-10 68.6 116 37.9
TWI59G1434 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 9.8e-10 67.8 124 34.7
FAN23G0182 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.7e-09 67.0 115 40.0
FAN23G0731 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.7e-09 67.0 115 40.0
FAN23G1358 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.7e-09 67.0 115 40.0
TWI59G0221 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 1.7e-09 67.0 131 31.3
FAN17G3075 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.9e-09 65.5 177 33.9
FvH4_1g00551 Fragaria vesca HOM05D003981 ORTHO05D003666 1.1e-08 64.3 103 36.9
FAN08G0629 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.1e-08 64.3 155 33.5
Nn1g03296 Nelumbo nucifera HOM05D000007 ORTHO05D003666 1.1e-08 64.3 126 31.0
FAN28G2016 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.4e-08 63.9 169 30.2
Atru.chr9.1609 Acer truncatum HOM05D003981 ORTHO05D003666 1.8e-08 63.5 120 34.2
FvH4_1g00812 Fragaria vesca HOM05D003981 ORTHO05D003666 4.1e-08 62.4 173 29.5
FvH4_3g01041 Fragaria vesca HOM05D003981 ORTHO05D003666 5.4e-08 62.0 118 30.5
Ciclev10006982m.g Citrus clementina HOM05D003981 ORTHO05D003666 7.0e-08 61.6 96 36.5
CiPaw.13G152900 Carya illinoinensis HOM05D000007 ORTHO05D003666 2.0e-07 60.1 104 41.3
FAN02G2079 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.0e-07 60.1 119 33.6
FAN09G0012 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.0e-07 60.1 119 33.6
FvH4_6g47440 Fragaria vesca HOM05D003981 ORTHO05D003666 3.5e-07 59.3 119 33.6
FvH4_5g38320 Fragaria vesca HOM05D003981 ORTHO05D003666 4.5e-07 58.9 155 33.5
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 5.9e-07 58.5 73 43.8
HanXRQChr13g0419551 Helianthus annuus HOM05D000007 ORTHO05D003666 7.7e-07 58.2 92 37.0
CSS0034833 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 1.7e-06 57.0 118 32.2
Ciclev10006577m.g Citrus clementina HOM05D003981 ORTHO05D003666 1.7e-06 57.0 118 37.3
FAN14G0065 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.7e-06 57.0 99 37.4
Actinidia06940 Actinidia chinensis HOM05D003981 ORTHO05D003666 2.3e-06 56.6 123 35.0
CiPaw.14G115500 Carya illinoinensis HOM05D000007 ORTHO05D003666 2.9e-06 56.2 74 40.5
QL07p033575 Quercus lobata HOM05D000007 ORTHO05D003666 6.6e-06 55.1 121 33.9
FAN18G2397 Fragaria x ananassa HOM05D003981 ORTHO05D003666 8.6e-06 54.7 128 35.2


User provided reference genes

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