Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G3306 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.9e-161 570.5 268 100.0
FvH4_6g21171 Fragaria vesca HOM05D000003 ORTHO05D006737 2.5e-62 243.0 137 86.1
FvH4_6g08193 Fragaria vesca HOM05D000003 ORTHO05D006737 3.1e-60 236.1 129 88.4
FvH4_3g26222 Fragaria vesca HOM05D000003 ORTHO05D006737 2.1e-48 196.8 129 76.7
FvH4_4g24131 Fragaria vesca HOM05D000003 ORTHO05D015112 4.8e-37 159.1 132 56.1
FvH4_5g31132 Fragaria vesca HOM05D002804 ORTHO05D006737 2.6e-35 153.3 116 63.8
FvH4_5g12241 Fragaria vesca HOM05D000003 ORTHO05D000004 6.1e-32 142.1 124 54.8
FvH4_5g33393 Fragaria vesca HOM05D000003 ORTHO05D006737 1.4e-28 131.0 108 57.4
RcHm_v2.0_Chr1g0344421 Rosa chinensis HOM05D000003 ORTHO05D006737 7.7e-27 125.2 190 39.5
RcHm_v2.0_Chr5g0040041 Rosa chinensis HOM05D000003 ORTHO05D006737 7.7e-27 125.2 204 35.3
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 1.7e-26 124.0 189 38.6
FvH4_4g20982 Fragaria vesca HOM05D000003 ORTHO05D006737 2.5e-25 120.2 127 47.2
FvH4_3g20371 Fragaria vesca HOM05D000003 ORTHO05D000004 9.4e-25 118.2 127 46.5
RcHm_v2.0_Chr3g0486981 Rosa chinensis HOM05D000003 ORTHO05D006737 1.6e-24 117.5 171 37.4
FAN12G2468 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.1e-24 117.1 134 44.0
FvH4_3g27973 Fragaria vesca HOM05D000003 ORTHO05D006737 2.7e-24 116.7 127 45.7
FvH4_5g30811 Fragaria vesca HOM05D000003 ORTHO05D006737 1.0e-23 114.8 99 53.5
FAN12G3592 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.5e-22 110.9 134 42.5
FAN18G0619 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.0e-22 110.5 123 42.3
FAN13G1105 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.6e-22 110.2 124 41.9
FAN05G1256 Fragaria x ananassa HOM05D000031 ORTHO05D000030 9.8e-22 108.2 102 45.1
FAN15G1410 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.3e-21 107.8 125 42.4
RcHm_v2.0_Chr5g0065261 Rosa chinensis HOM05D000003 ORTHO05D006737 2.2e-21 107.1 117 46.2
RcHm_v2.0_Chr6g0288751 Rosa chinensis HOM05D000003 ORTHO05D006737 2.8e-21 106.7 117 46.2
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 3.7e-21 106.3 196 33.2
FAN02G3749 Fragaria x ananassa HOM05D006625 ORTHO05D008060 8.3e-21 105.1 126 40.5
FAN18G1324 Fragaria x ananassa HOM05D000003 ORTHO05D006737 8.3e-21 105.1 77 59.7
FAN14G5848 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.4e-20 103.6 109 45.0
FvH4_2g19503 Fragaria vesca HOM05D000003 ORTHO05D006737 4.1e-20 102.8 118 40.7
FvH4_6g06990 Fragaria vesca HOM05D000003 ORTHO05D006737 5.4e-20 102.4 121 40.5
RcHm_v2.0_Chr7g0212601 Rosa chinensis HOM05D000003 ORTHO05D006737 5.4e-20 102.4 116 41.4
FvH4_6g36441 Fragaria vesca HOM05D000003 ORTHO05D019158 7.0e-20 102.1 171 36.3
FAN09G3586 Fragaria x ananassa HOM05D004387 ORTHO05D005218 7.0e-20 102.1 130 38.5
FvH4_6g52701 Fragaria vesca HOM05D000003 ORTHO05D006737 3.5e-19 99.8 116 48.3
RcHm_v2.0_Chr5g0031961 Rosa chinensis HOM05D000003 ORTHO05D006737 3.5e-19 99.8 103 43.7
FvH4_3g25361 Fragaria vesca HOM05D000003 ORTHO05D006737 1.0e-18 98.2 108 43.5
FvH4_3g32552 Fragaria vesca HOM05D000003 ORTHO05D006737 1.0e-18 98.2 121 43.0
RcHm_v2.0_Chr1g0314431 Rosa chinensis HOM05D000003 ORTHO05D006737 5.0e-18 95.9 159 35.8
FAN15G2825 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.1e-17 94.7 108 46.3
FAN27G1320 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.5e-17 94.4 118 39.0
RcHm_v2.0_Chr4g0397511 Rosa chinensis HOM05D000003 ORTHO05D006737 3.3e-17 93.2 97 47.4
FAN25G3140 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.2e-17 92.8 84 52.4
RcHm_v2.0_Chr5g0036711 Rosa chinensis HOM05D000003 ORTHO05D006737 7.2e-17 92.0 101 43.6
FvH4_1g19421 Fragaria vesca HOM05D000003 ORTHO05D006737 1.2e-16 91.3 100 41.0
FvH4_2g00211 Fragaria vesca HOM05D000003 ORTHO05D006737 2.8e-16 90.1 148 33.1
RcHm_v2.0_Chr3g0474921 Rosa chinensis HOM05D000003 ORTHO05D006737 2.8e-16 90.1 92 45.7
FAN14G3095 Fragaria x ananassa HOM05D004368 ORTHO05D004990 1.4e-15 87.8 110 37.3
RcHm_v2.0_Chr2g0118121 Rosa chinensis HOM05D000003 ORTHO05D006737 1.8e-15 87.4 77 49.4
FAN08G2392 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.8e-15 85.5 132 37.1
FvH4_6g20980 Fragaria vesca HOM05D017784 ORTHO05D006737 8.9e-15 85.1 108 41.7
FAN19G0394 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.5e-14 84.3 94 40.4
FAN19G1043 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.5e-14 84.3 94 40.4
RcHm_v2.0_Chr1g0336051 Rosa chinensis HOM05D000003 ORTHO05D006737 2.0e-14 84.0 104 35.6
FAN14G3227 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.4e-14 83.2 118 33.1
FAN20G2266 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.3e-13 81.3 93 41.9
RcHm_v2.0_Chr5g0072311 Rosa chinensis HOM05D000003 ORTHO05D006737 1.3e-13 81.3 102 35.3
FvH4_1g25610 Fragaria vesca HOM05D000003 ORTHO05D000004 2.8e-13 80.1 76 52.6
FvH4_4g10782 Fragaria vesca HOM05D000003 ORTHO05D006737 2.8e-13 80.1 129 34.9
FAN01G2436 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.9e-13 79.3 83 43.4
RcHm_v2.0_Chr7g0176911 Rosa chinensis HOM05D000003 ORTHO05D006737 6.3e-13 79.0 103 36.9
RcHm_v2.0_Chr2g0125521 Rosa chinensis HOM05D000003 ORTHO05D006737 1.1e-12 78.2 83 42.2
RcHm_v2.0_Chr5g0033371 Rosa chinensis HOM05D000003 ORTHO05D006737 3.2e-12 76.6 98 37.8
FvH4_4g07010 Fragaria vesca HOM05D002778 ORTHO05D003112 4.1e-12 76.3 84 45.2
RcHm_v2.0_Chr4g0423161 Rosa chinensis HOM05D000003 ORTHO05D006737 5.4e-12 75.9 78 43.6
FAN12G1814 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.6e-11 74.3 93 45.2
FvH4_4g01552 Fragaria vesca HOM05D000003 ORTHO05D006737 3.5e-11 73.2 189 30.2
RcHm_v2.0_Chr7g0198361 Rosa chinensis HOM05D000003 ORTHO05D006737 4.5e-11 72.8 76 39.5
FAN01G2975 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.9e-11 72.4 115 36.5
FAN09G3405 Fragaria x ananassa HOM05D003121 ORTHO05D003535 5.9e-11 72.4 75 46.7
RcHm_v2.0_Chr4g0395671 Rosa chinensis HOM05D000003 ORTHO05D006737 5.9e-11 72.4 77 42.9
Ah.04g154180 Amaranthus hybridus HOM05D000003 ORTHO05D006737 1.7e-10 70.9 98 33.7
EL10Ac7g16695 Beta vulgaris HOM05D000003 ORTHO05D000006 5.0e-10 69.3 232 23.7
FAN01G1087 Fragaria x ananassa HOM05D000003 ORTHO05D006737 8.6e-10 68.6 87 35.6
FAN14G2822 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.1e-09 68.2 68 39.7
FvH4_4g08194 Fragaria vesca HOM05D000003 ORTHO05D000004 1.5e-09 67.8 58 50.0
FvH4_6g08250 Fragaria vesca HOM05D000003 ORTHO05D006737 1.5e-09 67.8 68 39.7
FvH4_6g32941 Fragaria vesca HOM05D000003 ORTHO05D006737 1.9e-09 67.4 92 32.6
EL10Ac5g12187 Beta vulgaris HOM05D000003 ORTHO05D000006 4.3e-09 66.2 98 32.7
AUR62035533 Chenopodium quinoa HOM05D005239 ORTHO05D006698 5.6e-09 65.9 124 30.6
FAN07G0617 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.2e-08 64.7 86 33.7
FAN23G2658 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.2e-08 64.7 63 46.0
Prupe.1G179300 Prunus persica HOM05D000003 ORTHO05D006737 2.8e-08 63.5 103 35.9
AUR62034216 Chenopodium quinoa HOM05D000003 ORTHO05D000167 3.6e-08 63.2 100 34.0
Ah.12g061120 Amaranthus hybridus HOM05D000003 ORTHO05D000167 6.1e-08 62.4 96 33.3
FAN11G0642 Fragaria x ananassa HOM05D000355 ORTHO05D000227 1.8e-07 60.8 57 43.9
FAN11G2439 Fragaria x ananassa HOM05D046867 ORTHO05D045776 3.1e-07 60.1 82 37.8
PSO210G2771 Papaver somniferum HOM05D000155 ORTHO05D000022 3.1e-07 60.1 111 30.6
FvH4_3g34330 Fragaria vesca HOM05D046867 ORTHO05D045776 8.9e-07 58.5 58 43.1
FvH4_7g03001 Fragaria vesca HOM05D010636 ORTHO05D011274 8.9e-07 58.5 103 30.1
FAN11G2655 Fragaria x ananassa HOM05D022094 ORTHO05D202872 8.9e-07 58.5 44 70.5
EL10Ac2g03796 Beta vulgaris HOM05D000003 ORTHO05D011877 2.0e-06 57.4 100 32.0
FAN05G0213 Fragaria x ananassa HOM05D001310 ORTHO05D008060 2.6e-06 57.0 61 41.0
TAR199G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 3.4e-06 56.6 91 30.8
Ah.01g008030 Amaranthus hybridus HOM05D000003 ORTHO05D006737 5.8e-06 55.8 84 31.0
FvH4_2g06731 Fragaria vesca HOM05D000003 ORTHO05D020649 5.8e-06 55.8 98 31.6
RcHm_v2.0_Chr5g0018821 Rosa chinensis HOM05D000003 ORTHO05D000022 5.8e-06 55.8 122 28.7
RcHm_v2.0_Chr5g0040021 Rosa chinensis HOM05D000003 ORTHO05D000022 5.8e-06 55.8 122 28.7
Sed0017531 Sechium edule HOM05D000003 ORTHO05D000126 5.8e-06 55.8 104 29.8
CSS0009143 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 7.5e-06 55.5 112 30.4
FvH4_3g27901 Fragaria vesca HOM05D000003 ORTHO05D000022 7.5e-06 55.5 120 28.3
FvH4_5g04911 Fragaria vesca HOM05D000003 ORTHO05D006737 7.5e-06 55.5 108 31.5
FAN14G0257 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.5e-06 55.5 63 39.7
Sed0009635 Sechium edule HOM05D015284 ORTHO05D000167 7.5e-06 55.5 76 35.5
FvH4_1g17621 Fragaria vesca HOM05D000003 ORTHO05D000006 9.8e-06 55.1 90 30.0
FvH4_3g30681 Fragaria vesca HOM05D000003 ORTHO05D000006 9.8e-06 55.1 100 32.0
RcHm_v2.0_Chr4g0406871 Rosa chinensis HOM05D000003 ORTHO05D000004 9.8e-06 55.1 126 29.4
RcHm_v2.0_Chr6g0286611 Rosa chinensis HOM05D000003 ORTHO05D006737 9.8e-06 55.1 171 27.5


User provided reference genes

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