Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G3291 Fragaria x ananassa HOM05D006578 ORTHO05D008100 5.2e-111 404.4 212 100.0
FAN13G1942 Fragaria x ananassa HOM05D006578 ORTHO05D008100 5.4e-100 367.9 247 83.8
FAN04G1820 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.3e-98 363.2 246 82.9
FAN18G3822 Fragaria x ananassa HOM05D006578 ORTHO05D008100 5.1e-98 361.3 247 78.5
FAN08G0426 Fragaria x ananassa HOM05D006578 ORTHO05D008100 6.6e-98 360.9 247 82.2
FAN18G0518 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.5e-97 359.8 247 78.5
FvH4_5g04650 Fragaria vesca HOM05D006578 ORTHO05D008100 2.5e-97 359.0 247 78.1
Prupe.5G120500 Prunus persica HOM05D006578 ORTHO05D008100 1.5e-70 270.0 250 60.8
Duzib068G0825 Durio zibethinus HOM05D006578 ORTHO05D008100 1.9e-60 236.5 240 53.3
ClCG07G011600 Citrullus lanatus HOM05D006578 ORTHO05D008100 2.1e-59 233.0 242 59.5
MELO3C016296.2 Cucumis melo HOM05D006578 ORTHO05D008100 4.6e-59 231.9 241 53.5
Cfa012002 Carpinus fangiana HOM05D006578 ORTHO05D008100 3.0e-58 229.2 248 53.2
CsaV3_4G006610 Cucumis sativus L. HOM05D006578 ORTHO05D008100 8.7e-58 227.6 243 52.7
Thecc.03G298500 Theobroma cacao HOM05D006578 ORTHO05D008100 1.5e-57 226.9 233 52.8
COL.COLO4_10707 Corchorus olitorius HOM05D006578 ORTHO05D008100 4.3e-57 225.3 243 51.0
Cpa.g.sc79.32 Carica papaya HOM05D006578 ORTHO05D008100 5.7e-57 224.9 239 51.9
Ciclev10024562m.g Citrus clementina HOM05D006578 ORTHO05D008100 1.6e-56 223.4 245 51.0
Manes.02G009600 Manihot esculenta HOM05D006578 ORTHO05D008100 3.1e-55 219.2 235 54.0
Phvul.010G094000 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 3.1e-55 219.2 241 50.6
AL7G29450 Arabidopsis lyrata HOM05D006578 ORTHO05D008100 4.1e-55 218.8 245 53.5
Atru.chr9.1977 Acer truncatum HOM05D006578 ORTHO05D008100 6.9e-55 218.0 239 50.6
Atru.chr9.1992 Acer truncatum HOM05D006578 ORTHO05D008100 6.9e-55 218.0 239 50.6
Haze_09067 Corylus avellana HOM05D006578 ORTHO05D008100 9.0e-55 217.6 183 63.9
CiPaw.11G120900 Carya illinoinensis HOM05D006578 ORTHO05D008100 1.5e-54 216.9 243 51.4
Thhalv10027518m.g Eutrema salsugineum HOM05D006578 ORTHO05D008100 2.0e-54 216.5 245 51.4
Glyma.07G075100 Glycine max HOM05D006578 ORTHO05D008100 2.0e-54 216.5 244 50.8
Gohir.A05G346600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 2.0e-54 216.5 239 50.2
Lj3g0025915 Lotus japonicus HOM05D006578 ORTHO05D008100 2.6e-54 216.1 243 51.0
QL02p030348 Quercus lobata HOM05D006578 ORTHO05D008100 2.6e-54 216.1 178 60.1
CARHR231290 Cardamine hirsuta HOM05D006578 ORTHO05D008100 4.5e-54 215.3 232 49.1
BcaNung04080 Brassica carinata HOM05D006578 ORTHO05D008100 5.9e-54 214.9 244 51.6
PGR042G0620 Punica granatum HOM05D006578 ORTHO05D008100 5.9e-54 214.9 239 53.1
TWI60G1670 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 5.9e-54 214.9 244 48.8
Gorai.012G073800 Gossypium raimondii HOM05D006578 ORTHO05D008100 7.7e-54 214.5 233 49.8
Potri.001G091300 Populus trichocarpa HOM05D006578 ORTHO05D008100 7.7e-54 214.5 234 52.1
Aa31LG6G7150 Aethionema arabicum HOM05D006578 ORTHO05D008100 1.0e-53 214.2 244 47.1
Gohir.D04G065600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 1.0e-53 214.2 233 49.8
Sabra01G0067600 Salix brachista HOM05D006578 ORTHO05D008100 1.3e-53 213.8 236 50.8
Carub.0007s1722 Capsella rubella HOM05D006578 ORTHO05D008100 1.7e-53 213.4 243 51.9
Potri.003G140400 Populus trichocarpa HOM05D006578 ORTHO05D008100 1.7e-53 213.4 235 50.2
AT4G23890 Arabidopsis thaliana HOM05D006578 ORTHO05D008100 5.0e-53 211.8 245 50.6
EL10Ac5g12919 Beta vulgaris HOM05D006578 ORTHO05D008100 5.0e-53 211.8 245 52.7
BcaNung01096 Brassica carinata HOM05D006578 ORTHO05D008100 9.4e-52 207.6 182 62.1
VMungo0331G0206 Vigna mungo HOM05D005332 ORTHO05D006861 9.4e-52 207.6 241 48.5
BraA03t14550Z Brassica rapa HOM05D006578 ORTHO05D008100 1.6e-51 206.8 177 62.7
THA.LOC104815081 Tarenaya hassleriana HOM05D006578 ORTHO05D008100 1.6e-51 206.8 241 48.5
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 7.9e-51 204.5 234 48.3
BcaC09g50934 Brassica carinata HOM05D006578 ORTHO05D008100 1.8e-50 203.4 182 59.9
C01p19130 Brassica napus HOM05D006578 ORTHO05D008100 1.8e-50 203.4 182 59.9
BolC1t01839H Brassica oleracea HOM05D006578 ORTHO05D008100 2.3e-50 203.0 179 60.3
BraA01t01458Z Brassica rapa HOM05D006578 ORTHO05D008100 2.3e-50 203.0 183 56.8
A01p15200 Brassica napus HOM05D006578 ORTHO05D008100 3.0e-50 202.6 185 61.1
Medtr8g032260 Medicago truncatula HOM05D006578 ORTHO05D008100 3.9e-50 202.2 247 49.0
Oeu009960.1 Olea europaea HOM05D006578 ORTHO05D008100 3.9e-50 202.2 244 48.8
Ca_18845_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 4.3e-49 198.7 241 49.0
Sp7g21850 Schrenkiella parvula HOM05D006578 ORTHO05D008100 4.3e-49 198.7 243 49.0
Nitab4.5_0001210g0110 Nicotiana tabacum HOM05D006578 ORTHO05D008100 5.7e-49 198.4 242 50.0
A03p54830 Brassica napus HOM05D006578 ORTHO05D008100 7.4e-49 198.0 177 61.0
Sed0010985 Sechium edule HOM05D006578 ORTHO05D008100 1.7e-48 196.8 231 51.1
Hma1.2p1_0359F.1_g135230 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 6.3e-48 194.9 231 48.1
CSS0036002 Camellia sinensis var. sinensis HOM05D006578 ORTHO05D008100 8.2e-48 194.5 250 48.4
MSTRG.11922 Avicennia marina HOM05D006578 ORTHO05D008100 1.8e-47 193.4 240 49.2
AUR62010844 Chenopodium quinoa HOM05D006578 ORTHO05D008100 1.8e-47 193.4 243 48.1
Lsat_1_v5_gn_3_10861 Lactuca sativa HOM05D006578 ORTHO05D008100 1.2e-46 190.7 240 52.1
Cc08_g16100 Coffea canephora HOM05D006578 ORTHO05D008100 1.5e-46 190.3 234 49.6
Sopen08g030660 Solanum pennellii HOM05D006578 ORTHO05D008100 1.5e-46 190.3 247 49.0
Solyc08g082400.1 Solanum lycopersicum HOM05D006578 ORTHO05D008100 2.0e-46 189.9 249 50.6
TAR633G0540 Trochodendron aralioides HOM05D006578 ORTHO05D008100 2.0e-46 189.9 181 54.7
Dinv37530 Davidia involucrata HOM05D006578 ORTHO05D008100 3.4e-46 189.1 226 50.0
Peaxi162Scf00074g00082 Petunia axillaris HOM05D006578 ORTHO05D008100 1.3e-45 187.2 228 50.4
PGSC0003DMG400044958 Solanum tuberosum HOM05D006578 ORTHO05D008100 1.7e-45 186.8 249 48.2
Nitab4.5_0006775g0020 Nicotiana tabacum HOM05D006578 ORTHO05D008100 6.5e-45 184.9 230 50.0
Lalb_Chr04g0256691 Lupinus albus HOM05D006578 ORTHO05D008100 1.1e-44 184.1 252 44.4
unitig_32.g10973 Utricularia gibba HOM05D006578 ORTHO05D008100 1.1e-44 184.1 175 56.6
ATR0796G340 Amborella trichopoda HOM05D006578 ORTHO05D008100 2.5e-44 183.0 237 45.6
CAN.G1804.8 Capsicum annuum HOM05D006578 ORTHO05D008100 4.2e-44 182.2 184 56.0
Migut.A00640 Erythranthe guttata HOM05D006578 ORTHO05D008100 1.4e-42 177.2 181 60.2
Lj2P167T19 Lonicera japonica HOM05D006578 ORTHO05D008100 1.8e-42 176.8 179 53.6
AUR62019843 Chenopodium quinoa HOM05D006578 ORTHO05D008100 2.3e-42 176.4 238 44.5
HanXRQChr17g0534801 Helianthus annuus HOM05D006578 ORTHO05D008100 6.7e-42 174.9 231 49.4
Hma1.2p1_0359F.1_g135240 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 1.1e-41 174.1 124 66.1
Psat4g152960 Pisum sativum HOM05D006578 ORTHO05D008100 1.1e-41 174.1 240 45.4
Actinidia27316 Actinidia chinensis HOM05D006578 ORTHO05D008100 2.2e-40 169.9 159 54.7
ECA246G0449 Erigeron canadensis HOM05D001832 ORTHO05D001861 4.8e-40 168.7 223 47.1
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 6.3e-40 168.3 207 47.8
Sabra03G0101400 Salix brachista HOM05D006578 ORTHO05D008100 1.4e-39 167.2 235 44.7
SEGI_09764 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 3.1e-39 166.0 179 50.8
SEGI_13573 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 3.1e-39 166.0 179 50.8
PSO761G0627 Papaver somniferum HOM05D006578 ORTHO05D008100 1.6e-38 163.7 128 64.8
PSO210G4984 Papaver somniferum HOM05D006578 ORTHO05D008100 2.0e-38 163.3 128 69.5
Os07g0196200 Oryza sativa ssp. japonica HOM05D006578 ORTHO05D008100 1.3e-37 160.6 179 49.7
Zm00001eb224490 Zea mays HOM05D006578 ORTHO05D008100 2.2e-37 159.8 178 49.4
Aqoxy2G01516 Aquilegia oxysepala HOM05D006578 ORTHO05D008100 3.8e-37 159.1 125 67.2
CBR_g28643 Chara braunii HOM05D006578 ORTHO05D008100 7.0e-31 138.3 128 53.9
Pp3c11_19730 Physcomitrium patens HOM05D006578 ORTHO05D008100 1.2e-30 137.5 179 43.0
AagrBONN_evm.TU.Sc2ySwM_117.36 Anthoceros agrestis HOM05D006578 ORTHO05D008100 1.7e-29 133.7 183 42.1
Mapoly0067s0043 Marchantia polymorpha HOM05D006578 ORTHO05D008100 3.8e-29 132.5 174 40.2
SMO146G0113 Selaginella moellendorffii HOM05D006578 ORTHO05D008100 4.4e-25 119.0 183 38.3
GSVIVG01019536001 Vitis vinifera HOM05D006578 ORTHO05D008100 9.8e-25 117.9 235 35.7
C07p53190 Brassica napus HOM05D006578 ORTHO05D008100 9.5e-12 74.7 107 49.5
BcaNung04242 Brassica carinata HOM05D006578 ORTHO05D008100 2.8e-11 73.2 107 48.6
BolC7t45814H Brassica oleracea HOM05D006578 ORTHO05D008100 2.8e-11 73.2 107 48.6
Sabra15G0075700 Salix brachista HOM05D000345 ORTHO05D000215 1.0e-10 71.2 96 42.7
Oeu054024.1 Olea europaea HOM05D006578 ORTHO05D008100 5.2e-10 68.9 65 53.8
TWI81G0713 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 1.7e-08 63.9 134 35.1
SalBow1G4365 Salvia bowleyana HOM05D006578 ORTHO05D008100 3.7e-08 62.8 170 37.6
SalBow1G5827 Salvia bowleyana HOM05D006578 ORTHO05D008100 3.7e-08 62.8 170 37.6
Medtr7g076620 Medicago truncatula HOM05D006578 ORTHO05D008100 1.8e-07 60.5 135 34.8
CiPaw.12G082500 Carya illinoinensis HOM05D006578 ORTHO05D008100 4.1e-07 59.3 250 28.0
Ca_07882_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 1.6e-06 57.4 79 45.6


User provided reference genes

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