Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G2104 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.0e-70 270.0 140 100.0
FAN13G3265 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.0e-70 270.0 140 100.0
FAN08G2749 Fragaria x ananassa HOM05D007727 ORTHO05D009078 6.8e-67 257.3 140 97.1
FvH4_5g04620 Fragaria vesca HOM05D007727 ORTHO05D009078 4.4e-66 254.6 140 95.7
FAN18G4426 Fragaria x ananassa HOM05D007727 ORTHO05D009078 4.4e-66 254.6 140 95.7
FAN18G0179 Fragaria x ananassa HOM05D007727 ORTHO05D009078 4.9e-65 251.1 140 94.3
FAN04G2059 Fragaria x ananassa HOM05D007727 ORTHO05D009078 4.7e-60 234.6 124 98.4
Prupe.5G120300 Prunus persica HOM05D007727 ORTHO05D009078 2.1e-28 129.4 154 53.9
Potri.001G091400 Populus trichocarpa HOM05D007727 ORTHO05D009078 3.1e-19 99.0 144 45.1
Manes.02G009800 Manihot esculenta HOM05D007727 ORTHO05D009078 1.5e-18 96.7 131 48.1
Gorai.004G133300 Gossypium raimondii HOM05D007727 ORTHO05D009078 2.6e-18 95.9 151 41.1
Haze_09065 Corylus avellana HOM05D007727 ORTHO05D009078 1.0e-17 94.0 140 43.6
COL.COLO4_10705 Corchorus olitorius HOM05D007727 ORTHO05D009078 1.7e-17 93.2 148 41.9
Duzib205G0888 Durio zibethinus HOM05D007727 ORTHO05D009078 1.7e-17 93.2 147 41.5
Gohir.D08G130400 Gossypium hirsutum HOM05D007727 ORTHO05D009078 1.7e-17 93.2 142 42.3
Cfa012003 Carpinus fangiana HOM05D007727 ORTHO05D009078 2.2e-17 92.8 145 43.4
Cfa012008 Carpinus fangiana HOM05D007727 ORTHO05D009078 2.2e-17 92.8 145 43.4
Gohir.A08G103450 Gossypium hirsutum HOM05D007727 ORTHO05D009078 4.9e-17 91.7 148 39.2
Potri.004G151000 Populus trichocarpa HOM05D007727 ORTHO05D009078 8.4e-17 90.9 143 44.8
Potri.003G140200 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.1e-16 90.5 143 44.1
Potri.003G140233 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.1e-16 90.5 143 44.1
Sabra01G0067800 Salix brachista HOM05D007727 ORTHO05D009078 1.9e-16 89.7 141 43.3
Thecc.03G298300 Theobroma cacao HOM05D007727 ORTHO05D009078 3.2e-16 89.0 133 44.4
Cfa012009 Carpinus fangiana HOM05D007727 ORTHO05D009078 4.2e-16 88.6 125 48.0
Hma1.2p1_1461F.1_g285070 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 4.2e-16 88.6 148 40.5
Potri.003G140266 Populus trichocarpa HOM05D007727 ORTHO05D009078 7.1e-16 87.8 130 45.4
Haze_09064 Corylus avellana HOM05D007727 ORTHO05D009078 1.2e-15 87.0 147 43.5
CiPaw.12G082800 Carya illinoinensis HOM05D007727 ORTHO05D009078 2.1e-15 86.3 158 44.3
Sabra01G0067700 Salix brachista HOM05D007727 ORTHO05D009078 2.7e-15 85.9 143 42.7
CANSAT21G1217 Cannabis sativa HOM05D007727 ORTHO05D009078 3.5e-15 85.5 168 38.7
CiPaw.11G121100 Carya illinoinensis HOM05D007727 ORTHO05D009078 4.6e-15 85.1 144 45.1
Dinv38830 Davidia involucrata HOM05D007727 ORTHO05D009078 7.9e-15 84.3 132 43.9
VMungo1215G2373 Vigna mungo HOM05D007727 ORTHO05D009078 1.0e-14 84.0 131 42.0
CiPaw.12G082600 Carya illinoinensis HOM05D007727 ORTHO05D009078 1.8e-14 83.2 157 43.3
LjContig00312_ERROPOS870357g0016151 Lotus japonicus HOM05D007727 ORTHO05D009078 2.3e-14 82.8 115 44.3
Glyma.08G023200 Glycine max HOM05D007727 ORTHO05D009078 3.0e-14 82.4 138 39.1
QL02p030384 Quercus lobata HOM05D007727 ORTHO05D009078 3.0e-14 82.4 131 45.0
QL02p030408 Quercus lobata HOM05D007727 ORTHO05D009078 5.1e-14 81.6 131 45.8
Hma1.2p1_1746F.1_g300420 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 6.7e-14 81.3 154 39.6
CSS0019090 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 1.5e-13 80.1 162 38.9
Ciclev10022327m.g Citrus clementina HOM05D007727 ORTHO05D009078 2.5e-13 79.3 147 40.8
Phvul.002G164400 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 2.5e-13 79.3 103 48.5
Glyma.11G017500 Glycine max HOM05D007727 ORTHO05D009078 4.3e-13 78.6 131 40.5
QL02p030393 Quercus lobata HOM05D007727 ORTHO05D009078 4.3e-13 78.6 131 45.0
Glyma.05G216900 Glycine max HOM05D007727 ORTHO05D009078 5.7e-13 78.2 114 41.2
Glyma.01G225500 Glycine max HOM05D007727 ORTHO05D009078 9.6e-13 77.4 104 48.1
ClCG07G011610 Citrullus lanatus HOM05D007727 ORTHO05D009078 2.8e-12 75.9 124 41.1
QL02p030389 Quercus lobata HOM05D007727 ORTHO05D009078 2.8e-12 75.9 138 42.8
Rhsim02G0243900 Rhododendron simsii HOM05D007727 ORTHO05D009078 3.7e-12 75.5 149 38.3
Eucgr.D01742 Eucalyptus grandis HOM05D007727 ORTHO05D009078 6.3e-12 74.7 66 63.6
Eucgr.D01744 Eucalyptus grandis HOM05D007727 ORTHO05D009078 1.8e-11 73.2 113 45.1
Rhsim02G0243800 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.8e-11 73.2 123 40.7
Rhsim02G0244000 Rhododendron simsii HOM05D007727 ORTHO05D009078 3.1e-11 72.4 149 37.6
Gohir.A02G100000 Gossypium hirsutum HOM05D007727 ORTHO05D009078 4.1e-11 72.0 147 40.1
Glyma.08G022800 Glycine max HOM05D007727 ORTHO05D009078 6.9e-11 71.2 118 41.5
Lalb_Chr05g0224131 Lupinus albus HOM05D007727 ORTHO05D009078 6.9e-11 71.2 126 38.9
Rhsim02G0243700 Rhododendron simsii HOM05D007727 ORTHO05D009078 9.0e-11 70.9 149 35.6
MELO3C016295.2 Cucumis melo HOM05D007727 ORTHO05D009078 1.2e-10 70.5 137 39.4
Glyma.05G217200 Glycine max HOM05D007727 ORTHO05D009078 1.2e-10 70.5 138 37.0
Gorai.003G078900 Gossypium raimondii HOM05D007727 ORTHO05D009078 2.0e-10 69.7 147 39.5
Oeu031673.1 Olea europaea HOM05D007727 ORTHO05D009078 2.0e-10 69.7 119 39.5
CSS0050195 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 2.6e-10 69.3 115 41.7
Gohir.D03G083800 Gossypium hirsutum HOM05D007727 ORTHO05D009078 2.6e-10 69.3 147 39.5
Hma1.2p1_1461F.1_g285060 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 2.6e-10 69.3 74 51.4
Hma1.2p1_2808F.1_g328866 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 2.6e-10 69.3 74 51.4
Eucgr.D01747 Eucalyptus grandis HOM05D007727 ORTHO05D009078 5.9e-10 68.2 113 40.7
Rhsim02G0243600 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.3e-09 67.0 139 36.7
Oeu031672.1 Olea europaea HOM05D007727 ORTHO05D009078 1.7e-09 66.6 110 41.8
Lj4g0015473 Lotus japonicus HOM05D007727 ORTHO05D009078 2.2e-09 66.2 128 40.6
TAR374G1599 Trochodendron aralioides HOM05D026466 ORTHO05D009078 2.2e-09 66.2 161 39.1
CsaV3_4G006600 Cucumis sativus L. HOM05D007727 ORTHO05D009078 2.9e-09 65.9 105 44.8
Sed0000706 Sechium edule HOM05D007727 ORTHO05D009078 2.9e-09 65.9 129 32.6
MSTRG.25674 Avicennia marina HOM05D007727 ORTHO05D009078 5.0e-09 65.1 111 42.3
TPR.G25603 Trifolium pratense HOM05D007727 ORTHO05D009078 6.5e-09 64.7 139 36.7
TAR374G1217 Trochodendron aralioides HOM05D026466 ORTHO05D009078 8.5e-09 64.3 158 36.7
MSTRG.25675 Avicennia marina HOM05D007727 ORTHO05D009078 2.5e-08 62.8 113 42.5
Medtr5g009290 Medicago truncatula HOM05D007727 ORTHO05D009078 9.3e-08 60.8 64 54.7
AUR62019842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 2.7e-07 59.3 80 45.0
ECA240G1351 Erigeron canadensis HOM05D007727 ORTHO05D009078 3.6e-07 58.9 66 53.0
Phvul.002G298200 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 4.6e-07 58.5 108 35.2
TPR.G11121 Trifolium pratense HOM05D007727 ORTHO05D009078 4.6e-07 58.5 138 32.6
AUR62010842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 6.1e-07 58.2 81 44.4
Psat2g185360 Pisum sativum HOM05D007727 ORTHO05D009078 7.9e-07 57.8 132 34.1
Nitab4.5_0001210g0030 Nicotiana tabacum HOM05D011491 ORTHO05D009078 1.3e-06 57.0 96 38.5
Phvul.002G298600 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 1.3e-06 57.0 101 35.6
Lj4g0008549 Lotus japonicus HOM05D007727 ORTHO05D009078 1.8e-06 56.6 133 36.1
Sopen08g030640 Solanum pennellii HOM05D011491 ORTHO05D009078 1.8e-06 56.6 49 53.1
PGSC0003DMG400012147 Solanum tuberosum HOM05D011491 ORTHO05D009078 3.0e-06 55.8 66 43.9
TPR.G3425 Trifolium pratense HOM05D007727 ORTHO05D009078 3.0e-06 55.8 118 33.9
PGSC0003DMG400012146 Solanum tuberosum HOM05D011491 ORTHO05D009078 3.9e-06 55.5 66 45.5
TPR.G3394 Trifolium pratense HOM05D007727 ORTHO05D009078 3.9e-06 55.5 107 37.4
A01p15180 Brassica napus HOM05D009622 ORTHO05D011757 6.7e-06 54.7 106 35.8
BraA01t01456Z Brassica rapa HOM05D009622 ORTHO05D011757 6.7e-06 54.7 106 35.8
A03p54810 Brassica napus HOM05D009622 ORTHO05D011757 8.7e-06 54.3 108 31.5
BraA03t14548Z Brassica rapa HOM05D009622 ORTHO05D011757 8.7e-06 54.3 108 31.5


User provided reference genes

Program Settings